Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041579
CDS Infomation

pacid=37464996 polypeptide=PGSC0003DMP400028149 locus=PGSC0003DMG400016115 ID=PGSC0003DMT400041579.v4.03 annot-version=v4.03
Sequence

ATGGAAAAATCACCAGAAGAAGTGCACCCTGTAAAGGTTTTTGGTTGGGCAGCTACAGAC
ACTTCTGGAACACTCTCCCCCTTTAAATTCTCCAGAAGGGCTACTGGTGATAAAGATGTG
AAATTGAAGATACTTTATTGTGGTATTTGTCATACTGATCTTCATCAATTGAAGAATGAA
TGGGGATTTTCTAAATATCCTATGGTTCCTGGACATGAGATTGTGGGTGAAGTAACTGAG
GTTGGTAGCAAGGTGGAGAAATTCAAACTTGGAGATAAAGCTGGTGTGGGGTGTCTAGTT
GGATCATGTCGATCTTGCGAAAACTGTAACAACGATATCGAGAACTATTGTTCTAAGGGA
ATAGCCACCTATAGTGCAATGTACCATGATGGAACACCAACGTACGGAGGCTACTCGGAC
ATAATCATTGTTGATGAACATTTCGTTGTTCGTGTCCCAGAAAACATGCCCCTAGCTGCT
GCAGCTCCTCTGCTTTGTGCTGGAATTACAACTTACAGCCCGTTGAGGTACTTTGGACTT
GATAAACCGGGGCTTCACGTTGGTGTAGTAGGTCTTGGTGGACTTGGTCATGTTGGTGTT
AAGTTTGCCAAGGCTTTAGGGGTAAAGGTGACGGTTATTAGTACGTCTCAAAGTAAACAG
AAGGAAGCTATTGAACGTCTCGGTGCTGATTCGTTTTTGATTAGCTCTGATCCGGATCAG
CTACAGGCTGCTATGGGCACAATGGATGGCATTCTTGATACAGTTGCTGCTACTCACCCT
GTCCTACCGTTGATCGGCCTATTGAAGACTAATGGGAAACTTATCATGCTCGGTGGAGTG
ACAAAACCTCTCGACCTACCCGTCTTTCCATTACTTATGGGGAGGAAGCTCGTAGCTGGA
AGTGGGATCGGAGGGATGAAAGAAACGCAAGAAATGATTGATTTTGCTGCAAAACACAAT
ATAACAGCAGATATTGAAGTCATTCCAATGGATTATGTCAATACTGCAATGGAACGTCTC
GCTAAAGCTGATGTCAAGTATCGTTTTGTCATTGACGTTGCTAAGACCCTCAAACCAGAT
GAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028149
PEP Infomation

pacid=37464996 transcript=PGSC0003DMT400041579 locus=PGSC0003DMG400016115 ID=PGSC0003DMT400041579.v4.03 annot-version=v4.03
Sequence

MEKSPEEVHPVKVFGWAATDTSGTLSPFKFSRRATGDKDVKLKILYCGICHTDLHQLKNE
WGFSKYPMVPGHEIVGEVTEVGSKVEKFKLGDKAGVGCLVGSCRSCENCNNDIENYCSKG
IATYSAMYHDGTPTYGGYSDIIIVDEHFVVRVPENMPLAAAAPLLCAGITTYSPLRYFGL
DKPGLHVGVVGLGGLGHVGVKFAKALGVKVTVISTSQSKQKEAIERLGADSFLISSDPDQ
LQAAMGTMDGILDTVAATHPVLPLIGLLKTNGKLIMLGGVTKPLDLPVFPLLMGRKLVAG
SGIGGMKETQEMIDFAAKHNITADIEVIPMDYVNTAMERLAKADVKYRFVIDVAKTLKPD
E*

Transcript Sequence

Transcript ID

PGSC0003DMT400041579
Transcript Infomation

pacid=37464996 locus=PGSC0003DMG400016115 ID=PGSC0003DMT400041579.v4.03 annot-version=v4.03
Sequence

ATGGAAAAATCACCAGAAGAAGTGCACCCTGTAAAGGTTTTTGGTTGGGCAGCTACAGAC
ACTTCTGGAACACTCTCCCCCTTTAAATTCTCCAGAAGGGCTACTGGTGATAAAGATGTG
AAATTGAAGATACTTTATTGTGGTATTTGTCATACTGATCTTCATCAATTGAAGAATGAA
TGGGGATTTTCTAAATATCCTATGGTTCCTGGACATGAGATTGTGGGTGAAGTAACTGAG
GTTGGTAGCAAGGTGGAGAAATTCAAACTTGGAGATAAAGCTGGTGTGGGGTGTCTAGTT
GGATCATGTCGATCTTGCGAAAACTGTAACAACGATATCGAGAACTATTGTTCTAAGGGA
ATAGCCACCTATAGTGCAATGTACCATGATGGAACACCAACGTACGGAGGCTACTCGGAC
ATAATCATTGTTGATGAACATTTCGTTGTTCGTGTCCCAGAAAACATGCCCCTAGCTGCT
GCAGCTCCTCTGCTTTGTGCTGGAATTACAACTTACAGCCCGTTGAGGTACTTTGGACTT
GATAAACCGGGGCTTCACGTTGGTGTAGTAGGTCTTGGTGGACTTGGTCATGTTGGTGTT
AAGTTTGCCAAGGCTTTAGGGGTAAAGGTGACGGTTATTAGTACGTCTCAAAGTAAACAG
AAGGAAGCTATTGAACGTCTCGGTGCTGATTCGTTTTTGATTAGCTCTGATCCGGATCAG
CTACAGGCTGCTATGGGCACAATGGATGGCATTCTTGATACAGTTGCTGCTACTCACCCT
GTCCTACCGTTGATCGGCCTATTGAAGACTAATGGGAAACTTATCATGCTCGGTGGAGTG
ACAAAACCTCTCGACCTACCCGTCTTTCCATTACTTATGGGGAGGAAGCTCGTAGCTGGA
AGTGGGATCGGAGGGATGAAAGAAACGCAAGAAATGATTGATTTTGCTGCAAAACACAAT
ATAACAGCAGATATTGAAGTCATTCCAATGGATTATGTCAATACTGCAATGGAACGTCTC
GCTAAAGCTGATGTCAAGTATCGTTTTGTCATTGACGTTGCTAAGACCCTCAAACCAGAT
GAGTAG