Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041573
CDS Infomation

pacid=37466957 polypeptide=PGSC0003DMP400028145 locus=PGSC0003DMG400016114 ID=PGSC0003DMT400041573.v4.03 annot-version=v4.03
Sequence

ATGGCAAAATCCTATGAAATTGAGCACCCAATTAAGGCATTTGGATGGGCAGCTAGAGAC
ACTTCTGGTGTTCTTTCTCCTTTCAATTTCTCAAGAAGGCACGAGATTGTGGGCGTGGTA
ACCGAGGTCGGTAGCAAGGTAGAAAAAGTGAAGGTGGGGGACAATGTAGGTGTTGGAGTA
CTCGTAGGATCATGTCAAAAATGTGATAGTTGTACCAATGACCTCGAACAATATTGTCCT
AGCCACATTGGTACGTATAGTACAACTTATTCTGACGGAACCACCACATACGGAGGCTAC
TCCGATCTCATGGTGGCCAACGAGCATTTCGTGCTCCGTTGGCCGGAGAATTTACCGATG
GAAGCTGCCCCATTGTTGTGTGCTGGTATCACAACATATAGCCCATTGAAATATTTTGGG
CTTGATAAGGCTGGATTGAACATTGGAGTTGTGGGCCTTGGTGGGCTGGGCCATATGGCT
GTAAAATTTGCAAAGGCTTTTGGATGCAATGTGACTGTTATTAGTACTACTATTAATAAG
AAGGATGAAGCAATTAAACATCTTGGTGCTAATTCATTCTTGATTAGTCATGATCAAGAA
CAAATGCAGGGTGCAACAAGCACATTAGATGGAATTATAGACACAGTTTCAGCAGAACAT
CCAATTGCTCCATTGCTCAATATATTAAAGCCTCATGGAAAGCTTGTAATGGTTGGTGCA
CCACCAAAGCCACTTGAGTTGCCAGTTTTCCCTTTGCTTATGGGTAGGAAAATAATGGGA
GGAAGCATTATTGGAGGAATGAAAGAGACACAAGAAATGCTTGACTTTGCAGCAAAGCAT
AAAATTACACCTGAAGTTGAAGTTGTTTCAATGGATTATGTAAATATTGCTATGAAACGC
CTTTCGAAATCAGATGTCAAGTATCGATTTGTGCTCGATGTTGGGAAAACATTGAAAGTT
GACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028145
PEP Infomation

pacid=37466957 transcript=PGSC0003DMT400041573 locus=PGSC0003DMG400016114 ID=PGSC0003DMT400041573.v4.03 annot-version=v4.03
Sequence

MAKSYEIEHPIKAFGWAARDTSGVLSPFNFSRRHEIVGVVTEVGSKVEKVKVGDNVGVGV
LVGSCQKCDSCTNDLEQYCPSHIGTYSTTYSDGTTTYGGYSDLMVANEHFVLRWPENLPM
EAAPLLCAGITTYSPLKYFGLDKAGLNIGVVGLGGLGHMAVKFAKAFGCNVTVISTTINK
KDEAIKHLGANSFLISHDQEQMQGATSTLDGIIDTVSAEHPIAPLLNILKPHGKLVMVGA
PPKPLELPVFPLLMGRKIMGGSIIGGMKETQEMLDFAAKHKITPEVEVVSMDYVNIAMKR
LSKSDVKYRFVLDVGKTLKVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400041573
Transcript Infomation

pacid=37466957 locus=PGSC0003DMG400016114 ID=PGSC0003DMT400041573.v4.03 annot-version=v4.03
Sequence

ATGGCAAAATCCTATGAAATTGAGCACCCAATTAAGGCATTTGGATGGGCAGCTAGAGAC
ACTTCTGGTGTTCTTTCTCCTTTCAATTTCTCAAGAAGGCACGAGATTGTGGGCGTGGTA
ACCGAGGTCGGTAGCAAGGTAGAAAAAGTGAAGGTGGGGGACAATGTAGGTGTTGGAGTA
CTCGTAGGATCATGTCAAAAATGTGATAGTTGTACCAATGACCTCGAACAATATTGTCCT
AGCCACATTGGTACGTATAGTACAACTTATTCTGACGGAACCACCACATACGGAGGCTAC
TCCGATCTCATGGTGGCCAACGAGCATTTCGTGCTCCGTTGGCCGGAGAATTTACCGATG
GAAGCTGCCCCATTGTTGTGTGCTGGTATCACAACATATAGCCCATTGAAATATTTTGGG
CTTGATAAGGCTGGATTGAACATTGGAGTTGTGGGCCTTGGTGGGCTGGGCCATATGGCT
GTAAAATTTGCAAAGGCTTTTGGATGCAATGTGACTGTTATTAGTACTACTATTAATAAG
AAGGATGAAGCAATTAAACATCTTGGTGCTAATTCATTCTTGATTAGTCATGATCAAGAA
CAAATGCAGGGTGCAACAAGCACATTAGATGGAATTATAGACACAGTTTCAGCAGAACAT
CCAATTGCTCCATTGCTCAATATATTAAAGCCTCATGGAAAGCTTGTAATGGTTGGTGCA
CCACCAAAGCCACTTGAGTTGCCAGTTTTCCCTTTGCTTATGGGTAGGAAAATAATGGGA
GGAAGCATTATTGGAGGAATGAAAGAGACACAAGAAATGCTTGACTTTGCAGCAAAGCAT
AAAATTACACCTGAAGTTGAAGTTGTTTCAATGGATTATGTAAATATTGCTATGAAACGC
CTTTCGAAATCAGATGTCAAGTATCGATTTGTGCTCGATGTTGGGAAAACATTGAAAGTT
GACTAA