Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041521
CDS Infomation

pacid=37430369 polypeptide=PGSC0003DMP400028117 locus=PGSC0003DMG400016094 ID=PGSC0003DMT400041521.v4.03 annot-version=v4.03
Sequence

ATGGGATTGAGCAATGGGGTGGCATTGAGTAATGGTCTAGCAAAGATAGAGACACAAAAG
TTGAAAGAAGAGATATGTCATGATGACAGTGCAGTGCCAGTGAAAGCTCATACATTGGAC
GAATTGCATTCATTACAAGTGAAGAAATCAGGACCTAACACTCCAATCATAGACCTTCAA
CAGACTGTCTTTGGATCTGAAGCTGACAAAAATAAGCAACAGCTTGAATCCATCAGTGCA
TCATTGGCATCATTGACAAGGGAGACAGGGCCAAAGGTAGTTAAAGGAGACCCTGCTAAA
CAGGCGGAGACGCCCAAAGTGGTCCATGCCTCTCATCAACATCAACATCAACACACTCCA
ACAATTAGCAATATTACTGATAGTGCTCTCAAGTTTACTCACATCCTCTATAATCTCTCC
CCTGCTGAGCTGTATGAGCAAGCAATCCAGAATGAGAAAGGCTCATTCATCACTTCAAGT
GGTGCTTTGGCCACACTTTCTGGTGCCAAAACAGGGCGATCCCCAAGGGACAAGCGTGTT
GTTAAGGATGACACCACATCAGAGGAACTTTGGTGGGGAAAGGGATCACCCAATATTGAG
ATGGACGAAAAGACTTTCTTAATCAACCGAGAAAGAGCCGTTGATTATCTTTGCTCATTG
GAGAAGGTTTACGTTAACGATCAGTTTCTCAACTGGGATCCAATGAATAAACTCAAAGTT
AGAATTGTATCTGCCAGAGCCTATCACTCCTTGTTCATGCACAACATGTGTATCCGACCT
ACTCCTGAAGAGCTAGAGAATTTTGGTACTCCGGATTTCACGATATACAATGCTGGAAAA
TTCCCGTGTAATCGCTACACTCACTATATGACTTCTTCAACTAGCATTGACATTAATCTT
GCTAGGAAAGAAATGGTCATCCTTGGCACACAGTATGCAGGGGAAATGAAAAAAGGTCTC
TTTAGTTTAATGCATTATCTAATGCCTAAACGTCAAATCCTCTCTTTGCACTCCGGCTGC
AATATGGGAAAAGACGGAGATGTAGCCCTCTTCTTCGGATTATCAGGAACCGGGAAGACT
ACATTGTCAACGGATCATAATAGGTACCTAATTGGAGATGATGAACATTGTTGGAGTGAT
CACGGTGTTTCGAACATTGAGGGTGGTTGTTATGCTAAATGCATTGATCTGTCAAGGGAG
AAAGAACCTGATATTTGGAACGCCATCAAGTTTGGCACTGTGTTGGAAAATGTGGTTTTT
GAGGAACACATTCGAGAGGTGGACTACACGGATAAATCTGTAACAGAGAATACCAGGGCA
GCATATCCAATTGAATACATCCCAAATGCTAAAATACCATGTGTTGGTCCTCATCCGAAA
AATGTCATTCTTCTTGCTTGTGATGCTTTCGGTGTGCTTCCTCCAGTCAGCAAATTGAAC
TTGGCACAGACAATGTACCACTTTATTAGTGGCTACACAGCTCTGGTGGCAGGAACAGAG
GATGGTATTAAAGAGCCAACAGCAACATTTTCAGCATGTTTTGGTGCAGCATTTATAATG
TTTCATCCAACAAAATATGCAGCAATGTTAGCTGAGAAAATGCAGAAACAAGGAGCTACT
GGATGGCTCGTCAACACCGGATGGTCTGGTGGAAGCTATGGATCAGGTAGCCGTATTAAG
TTAGCACACACTAGGAAAATCATTGACGCGATCCACTCAGGAGAACTTTTGAATGCAAAT
TACTTGAAAACTGAAGTGTTCGGGCTGGAAATCCCAAATGAAATTAAGGGAGTTCCTTCA
GAGATTCTTGATCCAGTGAACACTTGGCCAGACAAGAATTCCTACCAGGAAACTCTATTG
AAGCTAGGAGGATTGTTTAGGAAGAATTTTGAAGTGTTCACAAACCACAAGATTGGAACT
GATAGCAATCTGACTAAGGAGATATTGGCTGCAGGTCCCAATTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028117
PEP Infomation

pacid=37430369 transcript=PGSC0003DMT400041521 locus=PGSC0003DMG400016094 ID=PGSC0003DMT400041521.v4.03 annot-version=v4.03
Sequence

MGLSNGVALSNGLAKIETQKLKEEICHDDSAVPVKAHTLDELHSLQVKKSGPNTPIIDLQ
QTVFGSEADKNKQQLESISASLASLTRETGPKVVKGDPAKQAETPKVVHASHQHQHQHTP
TISNITDSALKFTHILYNLSPAELYEQAIQNEKGSFITSSGALATLSGAKTGRSPRDKRV
VKDDTTSEELWWGKGSPNIEMDEKTFLINRERAVDYLCSLEKVYVNDQFLNWDPMNKLKV
RIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGKFPCNRYTHYMTSSTSIDINL
ARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVALFFGLSGTGKT
TLSTDHNRYLIGDDEHCWSDHGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENVVF
EEHIREVDYTDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLN
LAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMFHPTKYAAMLAEKMQKQGAT
GWLVNTGWSGGSYGSGSRIKLAHTRKIIDAIHSGELLNANYLKTEVFGLEIPNEIKGVPS
EILDPVNTWPDKNSYQETLLKLGGLFRKNFEVFTNHKIGTDSNLTKEILAAGPNF*

Transcript Sequence

Transcript ID

PGSC0003DMT400041521
Transcript Infomation

pacid=37430369 locus=PGSC0003DMG400016094 ID=PGSC0003DMT400041521.v4.03 annot-version=v4.03
Sequence

ATGGGATTGAGCAATGGGGTGGCATTGAGTAATGGTCTAGCAAAGATAGAGACACAAAAG
TTGAAAGAAGAGATATGTCATGATGACAGTGCAGTGCCAGTGAAAGCTCATACATTGGAC
GAATTGCATTCATTACAAGTGAAGAAATCAGGACCTAACACTCCAATCATAGACCTTCAA
CAGACTGTCTTTGGATCTGAAGCTGACAAAAATAAGCAACAGCTTGAATCCATCAGTGCA
TCATTGGCATCATTGACAAGGGAGACAGGGCCAAAGGTAGTTAAAGGAGACCCTGCTAAA
CAGGCGGAGACGCCCAAAGTGGTCCATGCCTCTCATCAACATCAACATCAACACACTCCA
ACAATTAGCAATATTACTGATAGTGCTCTCAAGTTTACTCACATCCTCTATAATCTCTCC
CCTGCTGAGCTGTATGAGCAAGCAATCCAGAATGAGAAAGGCTCATTCATCACTTCAAGT
GGTGCTTTGGCCACACTTTCTGGTGCCAAAACAGGGCGATCCCCAAGGGACAAGCGTGTT
GTTAAGGATGACACCACATCAGAGGAACTTTGGTGGGGAAAGGGATCACCCAATATTGAG
ATGGACGAAAAGACTTTCTTAATCAACCGAGAAAGAGCCGTTGATTATCTTTGCTCATTG
GAGAAGGTTTACGTTAACGATCAGTTTCTCAACTGGGATCCAATGAATAAACTCAAAGTT
AGAATTGTATCTGCCAGAGCCTATCACTCCTTGTTCATGCACAACATGTGTATCCGACCT
ACTCCTGAAGAGCTAGAGAATTTTGGTACTCCGGATTTCACGATATACAATGCTGGAAAA
TTCCCGTGTAATCGCTACACTCACTATATGACTTCTTCAACTAGCATTGACATTAATCTT
GCTAGGAAAGAAATGGTCATCCTTGGCACACAGTATGCAGGGGAAATGAAAAAAGGTCTC
TTTAGTTTAATGCATTATCTAATGCCTAAACGTCAAATCCTCTCTTTGCACTCCGGCTGC
AATATGGGAAAAGACGGAGATGTAGCCCTCTTCTTCGGATTATCAGGAACCGGGAAGACT
ACATTGTCAACGGATCATAATAGGTACCTAATTGGAGATGATGAACATTGTTGGAGTGAT
CACGGTGTTTCGAACATTGAGGGTGGTTGTTATGCTAAATGCATTGATCTGTCAAGGGAG
AAAGAACCTGATATTTGGAACGCCATCAAGTTTGGCACTGTGTTGGAAAATGTGGTTTTT
GAGGAACACATTCGAGAGGTGGACTACACGGATAAATCTGTAACAGAGAATACCAGGGCA
GCATATCCAATTGAATACATCCCAAATGCTAAAATACCATGTGTTGGTCCTCATCCGAAA
AATGTCATTCTTCTTGCTTGTGATGCTTTCGGTGTGCTTCCTCCAGTCAGCAAATTGAAC
TTGGCACAGACAATGTACCACTTTATTAGTGGCTACACAGCTCTGGTGGCAGGAACAGAG
GATGGTATTAAAGAGCCAACAGCAACATTTTCAGCATGTTTTGGTGCAGCATTTATAATG
TTTCATCCAACAAAATATGCAGCAATGTTAGCTGAGAAAATGCAGAAACAAGGAGCTACT
GGATGGCTCGTCAACACCGGATGGTCTGGTGGAAGCTATGGATCAGGTAGCCGTATTAAG
TTAGCACACACTAGGAAAATCATTGACGCGATCCACTCAGGAGAACTTTTGAATGCAAAT
TACTTGAAAACTGAAGTGTTCGGGCTGGAAATCCCAAATGAAATTAAGGGAGTTCCTTCA
GAGATTCTTGATCCAGTGAACACTTGGCCAGACAAGAATTCCTACCAGGAAACTCTATTG
AAGCTAGGAGGATTGTTTAGGAAGAATTTTGAAGTGTTCACAAACCACAAGATTGGAACT
GATAGCAATCTGACTAAGGAGATATTGGCTGCAGGTCCCAATTTTTGA