Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041482
CDS Infomation

pacid=37431320 polypeptide=PGSC0003DMP400028103 locus=PGSC0003DMG400016079 ID=PGSC0003DMT400041482.v4.03 annot-version=v4.03
Sequence

ATGGAACTCGATGGAGACTCTCCACCTATCTGGTCCCAACCAACCACCACACTCCTCCGT
CAACACCGCCGACAACCACCTTCTCCTCCTATCATCAACCCCGTTATTCTCATCCTACTC
ATACCCATTCTCGCTCTCCTCGTCTTGTTCTTTTTGGTTCCCCCTCTCCTTACCCACACT
ACCCAAATTCTTCGACCTAATTCTGTGAAAAAGGGATGGGACTCTTTTAATATCTTGCTT
GTAGTGTTTGCTATTCTTTGCGGCATATTTGCCCGAAAGAATGATGATAATTCAGCTGTT
GAGAGAAATAGGAATGTTTCAACTACTGAATCTTCTAATTTTAATGATGGATCAGCATCA
GCTGATGTTGATGTTGATCATGATATGCGGCGTCCTGTTTCTAATGATCGATGGTTTGAG
GCTAGTGATGAGAAAACATATCATTTTGGTGTACCTGAAACTAGTGTCAATCGTCTGAGA
AGAAGCAGCAGCTCCTATCCTGATCTGAGACAAGTGCCGCAATGGGAAACCGGTGAGAAT
CATTCTCGGTTTTATGATGATTTTGGTGTGAATTTGTACCGTTCTACAGCATCGGAATAT
GATACTCACCGTCAACGGAGGAGCGAGAAGCAGAGGGAAGAACCTGACGTTAAGGTGATT
CCGGTGGATACATTTGAAAGTCGTTCTTCTCCACCTGAACCTTTATTGCCGGAAAAACCT
CCTCCGATTAGCTCATCGAAGGCGCCTCAGGCGAATTTGAAAAGGAGAAGATCCTTTCAC
ACTGTTCCGCGCAAAGACAAGGCTGAAATGCAGAGTAATGAAGCTGAAGTTGAGCACAAC
AAAAAACAAGAGCCTCCACCACCGTCACCTCCTATGCCGCCGTCGCTGCCAACGGACCTA
TCACCTCCGGTGGAAAAGCCTCAGAAGCTTCAGCGGAGAAAGAGTGGCACGAAGGAATTA
GCCACAGCTATTGCCTCATTGTACAATCAGAGTAAGAGAAACAGGAGGAGAACAAAGAAG
AGAGATAATTTTGAGAGTGTCTCCGATTCTCCACCATCTGCGGAACAAGTCCTGCCACCA
GCAACACCGCCGCCTCCGCCTCCACCACCGCCGCCACCTCCGTCTAAGGTTTTTCAGAAC
CTGTTCAAGAAGAATAGGAAAAGTAAGCGTATACATTCCGATCCTTCCAATGTGCCATCA
CCTCCTCCTCCTCCACCGCTTCCCCCTCCTAATTCAATTTTCAACAATTTATTCAAAACA
GGCAGCAAAAGTAAGCGATTCCAGCAAACATCAACATCGACTCCTCCACCTCCCCCACCA
CCACCTCCACCTTCTTCAATTCTCAATAATTTGTTCAAACATGGAACCAAAAGCAGGAGA
TTCAAATCATCAATTTCGACTCCAACACCTCCTCCTCCTCCTCCACCTCCGCCACAAGCA
AACGTTTCATCATCAAGGCGGAGAAAAAGTTCGACGCATTCTCAACCACCAATGCAACCA
CCGCAACCTTCACGTCGACATTCATCCAGTTGGAGCAAACCTCCATTGCCAACAAAACCA
GCCGCCAGTTACTACGACGATAACTTGAACAGTGGCTCGCAATCACCTTTGATTCCAATG
CCACCTCCGCCTCCTATGCCGCCGTTCAAAATGCGGGAGATGAATTTCGTCCCTTCCGGT
GACTTCGTCAGGATACGGACCGCGAACAGCTCTCGCTGCAGCTCGCCGGACCTTGAAGAC
GTTGACGTTGACGATATGCCCGTCAGATCGTCGTCGGAGGCAATGGACGGTGAAGATTCA
ACGGGGCCGTCGGTCACTTGCCCGAGCCCGGATGTGAACATGAAAGCGGACTCTTTCATT
GCTCGGCTCCGAGATGAGTGGCGATTGGAGAAAATGAATTCAATGCGTGAAAAAAGTACA
CTGGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028103
PEP Infomation

pacid=37431320 transcript=PGSC0003DMT400041482 locus=PGSC0003DMG400016079 ID=PGSC0003DMT400041482.v4.03 annot-version=v4.03
Sequence

MELDGDSPPIWSQPTTTLLRQHRRQPPSPPIINPVILILLIPILALLVLFFLVPPLLTHT
TQILRPNSVKKGWDSFNILLVVFAILCGIFARKNDDNSAVERNRNVSTTESSNFNDGSAS
ADVDVDHDMRRPVSNDRWFEASDEKTYHFGVPETSVNRLRRSSSSYPDLRQVPQWETGEN
HSRFYDDFGVNLYRSTASEYDTHRQRRSEKQREEPDVKVIPVDTFESRSSPPEPLLPEKP
PPISSSKAPQANLKRRRSFHTVPRKDKAEMQSNEAEVEHNKKQEPPPPSPPMPPSLPTDL
SPPVEKPQKLQRRKSGTKELATAIASLYNQSKRNRRRTKKRDNFESVSDSPPSAEQVLPP
ATPPPPPPPPPPPPSKVFQNLFKKNRKSKRIHSDPSNVPSPPPPPPLPPPNSIFNNLFKT
GSKSKRFQQTSTSTPPPPPPPPPPSSILNNLFKHGTKSRRFKSSISTPTPPPPPPPPPQA
NVSSSRRRKSSTHSQPPMQPPQPSRRHSSSWSKPPLPTKPAASYYDDNLNSGSQSPLIPM
PPPPPMPPFKMREMNFVPSGDFVRIRTANSSRCSSPDLEDVDVDDMPVRSSSEAMDGEDS
TGPSVTCPSPDVNMKADSFIARLRDEWRLEKMNSMREKSTLG*

Transcript Sequence

Transcript ID

PGSC0003DMT400041482
Transcript Infomation

pacid=37431320 locus=PGSC0003DMG400016079 ID=PGSC0003DMT400041482.v4.03 annot-version=v4.03
Sequence

ATGGAACTCGATGGAGACTCTCCACCTATCTGGTCCCAACCAACCACCACACTCCTCCGT
CAACACCGCCGACAACCACCTTCTCCTCCTATCATCAACCCCGTTATTCTCATCCTACTC
ATACCCATTCTCGCTCTCCTCGTCTTGTTCTTTTTGGTTCCCCCTCTCCTTACCCACACT
ACCCAAATTCTTCGACCTAATTCTGTGAAAAAGGGATGGGACTCTTTTAATATCTTGCTT
GTAGTGTTTGCTATTCTTTGCGGCATATTTGCCCGAAAGAATGATGATAATTCAGCTGTT
GAGAGAAATAGGAATGTTTCAACTACTGAATCTTCTAATTTTAATGATGGATCAGCATCA
GCTGATGTTGATGTTGATCATGATATGCGGCGTCCTGTTTCTAATGATCGATGGTTTGAG
GCTAGTGATGAGAAAACATATCATTTTGGTGTACCTGAAACTAGTGTCAATCGTCTGAGA
AGAAGCAGCAGCTCCTATCCTGATCTGAGACAAGTGCCGCAATGGGAAACCGGTGAGAAT
CATTCTCGGTTTTATGATGATTTTGGTGTGAATTTGTACCGTTCTACAGCATCGGAATAT
GATACTCACCGTCAACGGAGGAGCGAGAAGCAGAGGGAAGAACCTGACGTTAAGGTGATT
CCGGTGGATACATTTGAAAGTCGTTCTTCTCCACCTGAACCTTTATTGCCGGAAAAACCT
CCTCCGATTAGCTCATCGAAGGCGCCTCAGGCGAATTTGAAAAGGAGAAGATCCTTTCAC
ACTGTTCCGCGCAAAGACAAGGCTGAAATGCAGAGTAATGAAGCTGAAGTTGAGCACAAC
AAAAAACAAGAGCCTCCACCACCGTCACCTCCTATGCCGCCGTCGCTGCCAACGGACCTA
TCACCTCCGGTGGAAAAGCCTCAGAAGCTTCAGCGGAGAAAGAGTGGCACGAAGGAATTA
GCCACAGCTATTGCCTCATTGTACAATCAGAGTAAGAGAAACAGGAGGAGAACAAAGAAG
AGAGATAATTTTGAGAGTGTCTCCGATTCTCCACCATCTGCGGAACAAGTCCTGCCACCA
GCAACACCGCCGCCTCCGCCTCCACCACCGCCGCCACCTCCGTCTAAGGTTTTTCAGAAC
CTGTTCAAGAAGAATAGGAAAAGTAAGCGTATACATTCCGATCCTTCCAATGTGCCATCA
CCTCCTCCTCCTCCACCGCTTCCCCCTCCTAATTCAATTTTCAACAATTTATTCAAAACA
GGCAGCAAAAGTAAGCGATTCCAGCAAACATCAACATCGACTCCTCCACCTCCCCCACCA
CCACCTCCACCTTCTTCAATTCTCAATAATTTGTTCAAACATGGAACCAAAAGCAGGAGA
TTCAAATCATCAATTTCGACTCCAACACCTCCTCCTCCTCCTCCACCTCCGCCACAAGCA
AACGTTTCATCATCAAGGCGGAGAAAAAGTTCGACGCATTCTCAACCACCAATGCAACCA
CCGCAACCTTCACGTCGACATTCATCCAGTTGGAGCAAACCTCCATTGCCAACAAAACCA
GCCGCCAGTTACTACGACGATAACTTGAACAGTGGCTCGCAATCACCTTTGATTCCAATG
CCACCTCCGCCTCCTATGCCGCCGTTCAAAATGCGGGAGATGAATTTCGTCCCTTCCGGT
GACTTCGTCAGGATACGGACCGCGAACAGCTCTCGCTGCAGCTCGCCGGACCTTGAAGAC
GTTGACGTTGACGATATGCCCGTCAGATCGTCGTCGGAGGCAATGGACGGTGAAGATTCA
ACGGGGCCGTCGGTCACTTGCCCGAGCCCGGATGTGAACATGAAAGCGGACTCTTTCATT
GCTCGGCTCCGAGATGAGTGGCGATTGGAGAAAATGAATTCAATGCGTGAAAAAAGTACA
CTGGGCTGA