Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041481
CDS Infomation

pacid=37432411 polypeptide=PGSC0003DMP400028102 locus=PGSC0003DMG400016078 ID=PGSC0003DMT400041481.v4.03 annot-version=v4.03
Sequence

ATGAAGCTAGCTCCACTAGACAGTATCCAAAATGCGCACGAAGACTCACTTTGGACGGCA
GCGTGGGTCCGATCGGACGGCGATAAACCGGCGCTACTTCTCACCGGAGGGCTTGATGAA
ACTGTTAGGTTATGGGACCCAACCAAACTCACTTGCCTTCACACAAACACCGGTCATTGC
CTCGGCGTTGTATCAGTCACTGCTCATCCGAATCGGAGAATCGCCGCCTCTGCTTCTCTA
GACAGCTTCATTCGAGTGTTTGAGGTTGATACTAATAACACCATCGCTACTCTCGAAGCT
CCTCCATCTGAAGTCTGGCAATTGCAATTTAGTCCCGATGGTAGCACTTTGGCAGCAGCT
GGAGGTGGTAGTTCATCAGTCAAGCTATGGGACACCACTCAGTGGCAACTTGTTGCCACA
TTGTCAATTCCGCGTCAAGGAGGTTCGCAACCATCCGAGAAAAGTGGCAGCAAGAAATTT
GTCCTCTCGGTTGCATGGAATACTGATGGGAGGCTTCTTGCCTGTGGTTCAGTTGATGGA
ACAATCTCTGTTTTTGATGTAGCTCGTGCGAAATTCCTCCACTTCTTGGAAGGCCATTGC
ATGCCTGTGCGCTCTCTTGTGTTTTCACCTTCACTCCATGATTCAAGGATACTTTTCTCA
GGATCAGATGATGGTCATGTGCATGTGTATGATGCTGAGGGAAAGACCTTGCTCACATCT
TTGTCAGGTCATGCGAGTTGGGTTTTGAGTGTGGATGTTTCTCCAGATGGGGCAGCCGTT
GCAACAGGTTCAAGTGACAAGACCGTTAAGCTGTGGGATCTTAAAATGAGAGCAGCTACG
CAGACATTAACTAACCACACAGACCAGGTATGGTCTGTGGCTTTTGGACCGCCATCAAGG
ATTGATGTTAGGTCTTGTATGCTTGCCAGTGTATCTGATGACAAGAGTATATCTTTCTAC
CAATACTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028102
PEP Infomation

pacid=37432411 transcript=PGSC0003DMT400041481 locus=PGSC0003DMG400016078 ID=PGSC0003DMT400041481.v4.03 annot-version=v4.03
Sequence

MKLAPLDSIQNAHEDSLWTAAWVRSDGDKPALLLTGGLDETVRLWDPTKLTCLHTNTGHC
LGVVSVTAHPNRRIAASASLDSFIRVFEVDTNNTIATLEAPPSEVWQLQFSPDGSTLAAA
GGGSSSVKLWDTTQWQLVATLSIPRQGGSQPSEKSGSKKFVLSVAWNTDGRLLACGSVDG
TISVFDVARAKFLHFLEGHCMPVRSLVFSPSLHDSRILFSGSDDGHVHVYDAEGKTLLTS
LSGHASWVLSVDVSPDGAAVATGSSDKTVKLWDLKMRAATQTLTNHTDQVWSVAFGPPSR
IDVRSCMLASVSDDKSISFYQYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400041481
Transcript Infomation

pacid=37432411 locus=PGSC0003DMG400016078 ID=PGSC0003DMT400041481.v4.03 annot-version=v4.03
Sequence

ATGAAGCTAGCTCCACTAGACAGTATCCAAAATGCGCACGAAGACTCACTTTGGACGGCA
GCGTGGGTCCGATCGGACGGCGATAAACCGGCGCTACTTCTCACCGGAGGGCTTGATGAA
ACTGTTAGGTTATGGGACCCAACCAAACTCACTTGCCTTCACACAAACACCGGTCATTGC
CTCGGCGTTGTATCAGTCACTGCTCATCCGAATCGGAGAATCGCCGCCTCTGCTTCTCTA
GACAGCTTCATTCGAGTGTTTGAGGTTGATACTAATAACACCATCGCTACTCTCGAAGCT
CCTCCATCTGAAGTCTGGCAATTGCAATTTAGTCCCGATGGTAGCACTTTGGCAGCAGCT
GGAGGTGGTAGTTCATCAGTCAAGCTATGGGACACCACTCAGTGGCAACTTGTTGCCACA
TTGTCAATTCCGCGTCAAGGAGGTTCGCAACCATCCGAGAAAAGTGGCAGCAAGAAATTT
GTCCTCTCGGTTGCATGGAATACTGATGGGAGGCTTCTTGCCTGTGGTTCAGTTGATGGA
ACAATCTCTGTTTTTGATGTAGCTCGTGCGAAATTCCTCCACTTCTTGGAAGGCCATTGC
ATGCCTGTGCGCTCTCTTGTGTTTTCACCTTCACTCCATGATTCAAGGATACTTTTCTCA
GGATCAGATGATGGTCATGTGCATGTGTATGATGCTGAGGGAAAGACCTTGCTCACATCT
TTGTCAGGTCATGCGAGTTGGGTTTTGAGTGTGGATGTTTCTCCAGATGGGGCAGCCGTT
GCAACAGGTTCAAGTGACAAGACCGTTAAGCTGTGGGATCTTAAAATGAGAGCAGCTACG
CAGACATTAACTAACCACACAGACCAGGTATGGTCTGTGGCTTTTGGACCGCCATCAAGG
ATTGATGTTAGGTCTTGTATGCTTGCCAGTGTATCTGATGACAAGAGTATATCTTTCTAC
CAATACTCCTGA