Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041394
CDS Infomation

pacid=37431476 polypeptide=PGSC0003DMP400028053 locus=PGSC0003DMG400016039 ID=PGSC0003DMT400041394.v4.03 annot-version=v4.03
Sequence

ATGGCATCATTTATTAACATCTCTTTCGATGTGAATATTTATAGAGATCTCCACGAGCCT
GCTCTCGTAATTGGGGGATGCTTTGTCTTGGTAGCATTGATCCTATCGCTTCTCTTAATT
TTTCAGCATCTCAGATACTATACTAATCCATCGGAACAAAAATGGATCGTCGGGGTCATT
TTCATGGTTCCTGTCTATGCAACTGAATCAATTTTATCCTTGTGGAACCCAAAACTTTCC
CTTGCCTGCGACATATTGAGGAACTGTTATGAAGCATTTGCACTCTATTCTTTTGGAAGT
TACTTGATCGCTTGCCTTGGGGGTGAGCGACAGGTTGTTGAACTGCTCGAAGATGAATCA
AGGAAACAAATTAGCCAGTCATTGCTAGGAGGAGAGGAGAAACCCGTGACACAAAAAAGG
ACGTTGTATAACTTCATTTTCCACCCATATGTCGTGGGGAAGCACTTGTTCACTATAGAA
AAATTTGGTCTTGTACAATATATGATTTTGAAGACGGTCAGTGCATTCCTAGCTCTTATT
TTGGAGATTTTTGGGGTATATGGTGATGGAAAGTTTAACTGGCACTATGGATATCCCTAT
ATCACTGTGGTACTAAACTTCAGCCAGATGTGGGCATTATATTGTCTTGTCCAATTTTAT
AATGTGACTCACCATAAACTCCAGTCGATAAAACCACTAGCAAAATTCATTAGCTTCAAG
GCCATTGTTTTTGCAACATGGTGGCAAGGGGTCGGTATCGCCTTGTTGTGTTCTTTAAGG
GTGCTCCCGAAGGAACGAAAGTTCCAGACTGGATTGCAAGATTTTCTGATCTGCATAGAG
ATGGCTATTGCTGCTATTGCTCATGTTTTTGTCTTCTCCTCATCACCGTATCACTATGTG
CCAACATCTGTATATGAAGAGTTTACTGCCCAAAAGGCTGAAACAACTCTAAATATAGAA
GATGGAGAGAAATCAGCCGTTGTTGAAAAGATAGAAACTAAGGCTGAGGTTCCAGGGACA
AGTGTTAGAGAAAGTGTTCAGGACATTGTTGTTGAAGGAGGTCAAAAAGTTGTGAAGGAT
GTAGTTTTGACCATAAACCAAGCGATGGGGCCGGTAGAGAAGGGTATGACAAAGATCCAA
GAAACTTTCCACCAAACATCAGTCGATGACGAGGAAGAAGAAAAACAAGAGACAGAAATT
ATGATTGAAGAACAAGAAGAGAATTCATCAGGCGAAAACAGATATAAACGAGAGACGGAG
ATTAAGATTGAGGAAGAAGAACATAAATTATCAAGAGACAACAGATCTCAGGTGTCTGTA
TCGCGAGATAAAACAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028053
PEP Infomation

pacid=37431476 transcript=PGSC0003DMT400041394 locus=PGSC0003DMG400016039 ID=PGSC0003DMT400041394.v4.03 annot-version=v4.03
Sequence

MASFINISFDVNIYRDLHEPALVIGGCFVLVALILSLLLIFQHLRYYTNPSEQKWIVGVI
FMVPVYATESILSLWNPKLSLACDILRNCYEAFALYSFGSYLIACLGGERQVVELLEDES
RKQISQSLLGGEEKPVTQKRTLYNFIFHPYVVGKHLFTIEKFGLVQYMILKTVSAFLALI
LEIFGVYGDGKFNWHYGYPYITVVLNFSQMWALYCLVQFYNVTHHKLQSIKPLAKFISFK
AIVFATWWQGVGIALLCSLRVLPKERKFQTGLQDFLICIEMAIAAIAHVFVFSSSPYHYV
PTSVYEEFTAQKAETTLNIEDGEKSAVVEKIETKAEVPGTSVRESVQDIVVEGGQKVVKD
VVLTINQAMGPVEKGMTKIQETFHQTSVDDEEEEKQETEIMIEEQEENSSGENRYKRETE
IKIEEEEHKLSRDNRSQVSVSRDKTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400041394
Transcript Infomation

pacid=37431476 locus=PGSC0003DMG400016039 ID=PGSC0003DMT400041394.v4.03 annot-version=v4.03
Sequence

ATGGCATCATTTATTAACATCTCTTTCGATGTGAATATTTATAGAGATCTCCACGAGCCT
GCTCTCGTAATTGGGGGATGCTTTGTCTTGGTAGCATTGATCCTATCGCTTCTCTTAATT
TTTCAGCATCTCAGATACTATACTAATCCATCGGAACAAAAATGGATCGTCGGGGTCATT
TTCATGGTTCCTGTCTATGCAACTGAATCAATTTTATCCTTGTGGAACCCAAAACTTTCC
CTTGCCTGCGACATATTGAGGAACTGTTATGAAGCATTTGCACTCTATTCTTTTGGAAGT
TACTTGATCGCTTGCCTTGGGGGTGAGCGACAGGTTGTTGAACTGCTCGAAGATGAATCA
AGGAAACAAATTAGCCAGTCATTGCTAGGAGGAGAGGAGAAACCCGTGACACAAAAAAGG
ACGTTGTATAACTTCATTTTCCACCCATATGTCGTGGGGAAGCACTTGTTCACTATAGAA
AAATTTGGTCTTGTACAATATATGATTTTGAAGACGGTCAGTGCATTCCTAGCTCTTATT
TTGGAGATTTTTGGGGTATATGGTGATGGAAAGTTTAACTGGCACTATGGATATCCCTAT
ATCACTGTGGTACTAAACTTCAGCCAGATGTGGGCATTATATTGTCTTGTCCAATTTTAT
AATGTGACTCACCATAAACTCCAGTCGATAAAACCACTAGCAAAATTCATTAGCTTCAAG
GCCATTGTTTTTGCAACATGGTGGCAAGGGGTCGGTATCGCCTTGTTGTGTTCTTTAAGG
GTGCTCCCGAAGGAACGAAAGTTCCAGACTGGATTGCAAGATTTTCTGATCTGCATAGAG
ATGGCTATTGCTGCTATTGCTCATGTTTTTGTCTTCTCCTCATCACCGTATCACTATGTG
CCAACATCTGTATATGAAGAGTTTACTGCCCAAAAGGCTGAAACAACTCTAAATATAGAA
GATGGAGAGAAATCAGCCGTTGTTGAAAAGATAGAAACTAAGGCTGAGGTTCCAGGGACA
AGTGTTAGAGAAAGTGTTCAGGACATTGTTGTTGAAGGAGGTCAAAAAGTTGTGAAGGAT
GTAGTTTTGACCATAAACCAAGCGATGGGGCCGGTAGAGAAGGGTATGACAAAGATCCAA
GAAACTTTCCACCAAACATCAGTCGATGACGAGGAAGAAGAAAAACAAGAGACAGAAATT
ATGATTGAAGAACAAGAAGAGAATTCATCAGGCGAAAACAGATATAAACGAGAGACGGAG
ATTAAGATTGAGGAAGAAGAACATAAATTATCAAGAGACAACAGATCTCAGGTGTCTGTA
TCGCGAGATAAAACAAGTTGA