Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041327
CDS Infomation

pacid=37442110 polypeptide=PGSC0003DMP400028007 locus=PGSC0003DMG400016003 ID=PGSC0003DMT400041327.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCTTCACTAGATATGATAAGGCAACATCTTCTTGATGATGTTGTTTTCATG
GAAAATTATTGTTCCTCTTCTTCATCATCAGAAACAAGTAGTACCCTTTATTCTCAAACC
TCATTGAATTCGGAATCTTTAGAATCATTAACCTCTGAGATCAAACTTGAAAGCAATTTC
TCTTTTTATCCTGATTTCATCAATACAGCTCAAAGTTTAAATCTTGAATCTGCCTCTCGT
TTGTTCGATAACTCAACAATTGAATTCCAAGCTAAACCCCAAAAGAAAAGAAGTTTCAAT
GATCGAAAACCTTCGTTAAACATTTCAATTCCTTCTGTCAAGAAAACAGAGGAACCAAAA
ACAGGGGAAGTAAAAACAGAGTACTCTGTTCAGAAAATGGTGGAAAATTCGGAGAAAAAG
CGATACAGAGGAGTGAGACAAAGGCCATGGGGGAAATTTGCAGCGGAGATTCGTGATCCA
ACTAGAAAGGGGACACGGGTTTGGTTAGGAACATTCGGTACTGCAATCGATGCAGCTTTG
GCATATGACAGAGCAGCATTTAGGCTCAGAGGGAGTAAAGCAATCATGAATTTCCCACTT
GAAGTAAGCAATTTCAAGCAAGAAAATCATGAGATTGAGAAAAATGTAGTAAGTTTGAAT
TTGAATACGAATTCTTGTGGGAAAAGGGTAAGAGGAGAAATGGAGAATGATGACAGAGTT
GTGGTGAAGAAAGAGGTGAAAAGAGAACAAATGGTAGCAACTCCATTAACACCTTCAAAT
TGGTCTTCAATTTGGGATAGTGGAAATGGAAAAGGTATTTTTGAAGTGCCACCTTTGTCA
CCATTATCACCACATCCAAGTTTTGGTTACTCTCAACTTTTGGTTTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400028007
PEP Infomation

pacid=37442110 transcript=PGSC0003DMT400041327 locus=PGSC0003DMG400016003 ID=PGSC0003DMT400041327.v4.03 annot-version=v4.03
Sequence

MDSSSLDMIRQHLLDDVVFMENYCSSSSSSETSSTLYSQTSLNSESLESLTSEIKLESNF
SFYPDFINTAQSLNLESASRLFDNSTIEFQAKPQKKRSFNDRKPSLNISIPSVKKTEEPK
TGEVKTEYSVQKMVENSEKKRYRGVRQRPWGKFAAEIRDPTRKGTRVWLGTFGTAIDAAL
AYDRAAFRLRGSKAIMNFPLEVSNFKQENHEIEKNVVSLNLNTNSCGKRVRGEMENDDRV
VVKKEVKREQMVATPLTPSNWSSIWDSGNGKGIFEVPPLSPLSPHPSFGYSQLLVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400041327
Transcript Infomation

pacid=37442110 locus=PGSC0003DMG400016003 ID=PGSC0003DMT400041327.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCTTCACTAGATATGATAAGGCAACATCTTCTTGATGATGTTGTTTTCATG
GAAAATTATTGTTCCTCTTCTTCATCATCAGAAACAAGTAGTACCCTTTATTCTCAAACC
TCATTGAATTCGGAATCTTTAGAATCATTAACCTCTGAGATCAAACTTGAAAGCAATTTC
TCTTTTTATCCTGATTTCATCAATACAGCTCAAAGTTTAAATCTTGAATCTGCCTCTCGT
TTGTTCGATAACTCAACAATTGAATTCCAAGCTAAACCCCAAAAGAAAAGAAGTTTCAAT
GATCGAAAACCTTCGTTAAACATTTCAATTCCTTCTGTCAAGAAAACAGAGGAACCAAAA
ACAGGGGAAGTAAAAACAGAGTACTCTGTTCAGAAAATGGTGGAAAATTCGGAGAAAAAG
CGATACAGAGGAGTGAGACAAAGGCCATGGGGGAAATTTGCAGCGGAGATTCGTGATCCA
ACTAGAAAGGGGACACGGGTTTGGTTAGGAACATTCGGTACTGCAATCGATGCAGCTTTG
GCATATGACAGAGCAGCATTTAGGCTCAGAGGGAGTAAAGCAATCATGAATTTCCCACTT
GAAGTAAGCAATTTCAAGCAAGAAAATCATGAGATTGAGAAAAATGTAGTAAGTTTGAAT
TTGAATACGAATTCTTGTGGGAAAAGGGTAAGAGGAGAAATGGAGAATGATGACAGAGTT
GTGGTGAAGAAAGAGGTGAAAAGAGAACAAATGGTAGCAACTCCATTAACACCTTCAAAT
TGGTCTTCAATTTGGGATAGTGGAAATGGAAAAGGTATTTTTGAAGTGCCACCTTTGTCA
CCATTATCACCACATCCAAGTTTTGGTTACTCTCAACTTTTGGTTTCATAG