Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041176
CDS Infomation

pacid=37432582 polypeptide=PGSC0003DMP400027914 locus=PGSC0003DMG400015933 ID=PGSC0003DMT400041176.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTTATTTTGTGGAGTGATTTTGGTACTTTTATGTATAACTAGTACTTGTCCT
TTGAAGAGCTATGCTGTTGATGAGGATTTTTTTCAATCAGAATGTTTGCAAGTGCCAACA
TCCGAGTTTTTGGGTTCGGTTAAGTCTACCATCGACATTGTTCGTCAAGTCACTTCGTTA
GTGTCAAAATTCGCTAGCTTCTTTGGCGATTTTCGACTTTCTAATGCCATTTCTGATTGT
CTTGATCTGTTGGATCTCTCAGCAGATGAACTTACTTGGACTCTTACTGCTTCTCAGAAT
CCCAAAGGGAAAAACAACAGTACAGGTAATCTAAGTGCAGATTTGAAGAATTATTTAAGT
GGAGCATTAATTAATCAAGATACATGCACCGAAGGATTCGATGGCACAAACGGACTAGTC
AAGAATTTGGTTGCGGGAAGTCTCAACCAAGTCACTTCATTAGTCCGCGACATTCTTCTT
ATGGTCCGCCCCGTCCCTAAGAAAAACGTCTTCCCCTCGGAGGCCAATGCCAGACGTGGG
AAGCCGTGGCAATTCTCCCGAGAAAGAAAATTAACGTCAAATGAAGAAGACAACAATTCA
TTCCCTTCGTGGATCAAACGAAAAGATAGAAGGTTATTGCAAGCATCAAGTCCGACTAAA
GGGGTAGTTACAGACGTTGTGGTAGCTCATGATGGAACTGGTAATTTTACACGAATTAAA
GATGCGATAGACGCAGCACCACAATTAAGTACAAAAAGATTTGTGATATATATTAAGAAG
GGAATTTATAAAGAGTATGTGGAGATTAGCAAGAAAAAATGGAATATTATGATGATTGGT
GATGGAATTGATGTTACTATTATTTCTGGGAATAGAAATTTTATTGATGGATGGACCACT
TATAGATCTGCAACATTTGCGGTAAAAGGTCAAGGATTCATAGCACGGGACATAACATTT
GAGAACACAGCAGGACCCGAAAAACACCAAGCAGTTGCATTTCGGTCCGACTCTGACTTA
TCCGTCTTGTTCCGATGCGCGGTGAGGGGCTACCAAGACACTCTCTACGCTCACTCCATG
CGACAATTCTACAGGGACTGTACTATTACTGGCACAGTCGATTTCATTTTCGGAGACGGT
ACAGCCATTTTCCAAAACTGTCAAATATTAGCACGAAAAGGACTGTCACAACAAAAAAAC
ACAATTACAGCCCAAGGTCGAAAGGAAATCGCTGAAACAACAGGTTTCACTATCCAATTT
TCGAACATATCTGGTGAACCGGATCTATTAGCTTCTCTCAATTCTACGTATACGTATCTT
GGAAGACCATGGAAGACGTATTCGCGAACTGTGATCATGCAATCTTACATGAGTAATGTA
ATTAGACCTCAAGGTTGGTTAGAATGGAACGGAAATATTTCACTTGACACATTGTATTAT
GCGGAGTACCAAAATTATGGGCCTGGCGCTGGTTTGGGCGGTAGAGTTAATTGGCCTGGT
TTTCATTTGCTCAATGATTCATCACAGGCAAATAATTTTACCGTTTCTCAGTTCCTTTTG
GGAAACTCATGGCTGCCTCCTACAGGAGTTAAGTATACCGCTGGTCTAGCGGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027914
PEP Infomation

pacid=37432582 transcript=PGSC0003DMT400041176 locus=PGSC0003DMG400015933 ID=PGSC0003DMT400041176.v4.03 annot-version=v4.03
Sequence

MGNLFCGVILVLLCITSTCPLKSYAVDEDFFQSECLQVPTSEFLGSVKSTIDIVRQVTSL
VSKFASFFGDFRLSNAISDCLDLLDLSADELTWTLTASQNPKGKNNSTGNLSADLKNYLS
GALINQDTCTEGFDGTNGLVKNLVAGSLNQVTSLVRDILLMVRPVPKKNVFPSEANARRG
KPWQFSRERKLTSNEEDNNSFPSWIKRKDRRLLQASSPTKGVVTDVVVAHDGTGNFTRIK
DAIDAAPQLSTKRFVIYIKKGIYKEYVEISKKKWNIMMIGDGIDVTIISGNRNFIDGWTT
YRSATFAVKGQGFIARDITFENTAGPEKHQAVAFRSDSDLSVLFRCAVRGYQDTLYAHSM
RQFYRDCTITGTVDFIFGDGTAIFQNCQILARKGLSQQKNTITAQGRKEIAETTGFTIQF
SNISGEPDLLASLNSTYTYLGRPWKTYSRTVIMQSYMSNVIRPQGWLEWNGNISLDTLYY
AEYQNYGPGAGLGGRVNWPGFHLLNDSSQANNFTVSQFLLGNSWLPPTGVKYTAGLAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400041176
Transcript Infomation

pacid=37432582 locus=PGSC0003DMG400015933 ID=PGSC0003DMT400041176.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTTATTTTGTGGAGTGATTTTGGTACTTTTATGTATAACTAGTACTTGTCCT
TTGAAGAGCTATGCTGTTGATGAGGATTTTTTTCAATCAGAATGTTTGCAAGTGCCAACA
TCCGAGTTTTTGGGTTCGGTTAAGTCTACCATCGACATTGTTCGTCAAGTCACTTCGTTA
GTGTCAAAATTCGCTAGCTTCTTTGGCGATTTTCGACTTTCTAATGCCATTTCTGATTGT
CTTGATCTGTTGGATCTCTCAGCAGATGAACTTACTTGGACTCTTACTGCTTCTCAGAAT
CCCAAAGGGAAAAACAACAGTACAGGTAATCTAAGTGCAGATTTGAAGAATTATTTAAGT
GGAGCATTAATTAATCAAGATACATGCACCGAAGGATTCGATGGCACAAACGGACTAGTC
AAGAATTTGGTTGCGGGAAGTCTCAACCAAGTCACTTCATTAGTCCGCGACATTCTTCTT
ATGGTCCGCCCCGTCCCTAAGAAAAACGTCTTCCCCTCGGAGGCCAATGCCAGACGTGGG
AAGCCGTGGCAATTCTCCCGAGAAAGAAAATTAACGTCAAATGAAGAAGACAACAATTCA
TTCCCTTCGTGGATCAAACGAAAAGATAGAAGGTTATTGCAAGCATCAAGTCCGACTAAA
GGGGTAGTTACAGACGTTGTGGTAGCTCATGATGGAACTGGTAATTTTACACGAATTAAA
GATGCGATAGACGCAGCACCACAATTAAGTACAAAAAGATTTGTGATATATATTAAGAAG
GGAATTTATAAAGAGTATGTGGAGATTAGCAAGAAAAAATGGAATATTATGATGATTGGT
GATGGAATTGATGTTACTATTATTTCTGGGAATAGAAATTTTATTGATGGATGGACCACT
TATAGATCTGCAACATTTGCGGTAAAAGGTCAAGGATTCATAGCACGGGACATAACATTT
GAGAACACAGCAGGACCCGAAAAACACCAAGCAGTTGCATTTCGGTCCGACTCTGACTTA
TCCGTCTTGTTCCGATGCGCGGTGAGGGGCTACCAAGACACTCTCTACGCTCACTCCATG
CGACAATTCTACAGGGACTGTACTATTACTGGCACAGTCGATTTCATTTTCGGAGACGGT
ACAGCCATTTTCCAAAACTGTCAAATATTAGCACGAAAAGGACTGTCACAACAAAAAAAC
ACAATTACAGCCCAAGGTCGAAAGGAAATCGCTGAAACAACAGGTTTCACTATCCAATTT
TCGAACATATCTGGTGAACCGGATCTATTAGCTTCTCTCAATTCTACGTATACGTATCTT
GGAAGACCATGGAAGACGTATTCGCGAACTGTGATCATGCAATCTTACATGAGTAATGTA
ATTAGACCTCAAGGTTGGTTAGAATGGAACGGAAATATTTCACTTGACACATTGTATTAT
GCGGAGTACCAAAATTATGGGCCTGGCGCTGGTTTGGGCGGTAGAGTTAATTGGCCTGGT
TTTCATTTGCTCAATGATTCATCACAGGCAAATAATTTTACCGTTTCTCAGTTCCTTTTG
GGAAACTCATGGCTGCCTCCTACAGGAGTTAAGTATACCGCTGGTCTAGCGGTTTAA