Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041169
CDS Infomation

pacid=37434884 polypeptide=PGSC0003DMP400027909 locus=PGSC0003DMG401015931 ID=PGSC0003DMT400041169.v4.03 annot-version=v4.03
Sequence

ATGTCTTCCTCCAAGCGAAATCACAAGGAAAAGATTGTTCGTCGCAACAAAGAAGAGAAG
GTTGAAGAGCCGGAGTTACCAAAGTACAGAGACAGAGCTAAAGAAAGGAGAGAAGATCAA
AATCCTGATTATGAACTCACTGAATTCGGTGGTTTTCATGCTGTTGCTCCTCCCGGGAAT
GTTGATCTCCTCTCTGCTGATGCTCAGAAATTATCTATTGAGAAGAGCAAGTATCTTGGA
GGTGATGTGGAACATACACATTTGGTGAAAGGGTTGGATTATGCTTTACTTCACAAAGTG
AGAAGTGAAATAGATAAGAAGCCAGAAGCTGGAGATGAGGCGTTTGAAGGAAAACCTAGA
GGTGTAAAGGAAGATCATCAATTGTCATTCCGCACTGCAACTGCCAAGTCAGTATACCAA
TGGATAATCAAGCCTCAGACTGTTATAAAGACCAATGAAATGTTTCTTCCTGGACGGATG
GCTTTTATTTTTAATATGGATAGTGGATACTCCAATGATATTCCTACAACTCTACACAGA
AGCAAAGCTGACTGTCCAGTCCTCGAGGAAATGGTTACAGTCAGTGTTGATGGTTCTGTT
CTAGACCGAATAGCTAAAATCATGTCCTATCTCCGTCTTGGATCATCAGGAAAAGTTCTC
AAAAAGAAGAAGAAGGAAAAAGATAGCAAAGGAAAGACAGTTATATTCAATGGTTATGAC
GAAGTATCGAAGTCTGATGCGTCAAAGAGCCAAAGTGATAAAGAAACCGTGCATCCATCT
GCACAACTTCCTAAAAAGAACCATTCAGAAAGAAGAGAGGATCAGGGACCTGCTGTTGCT
AGAACTGAAGAAGAAGATATCTTCATAGGGGAAGGTGTTGACTACTCCGTTCCTGCTGGA
GATATGGGTCAAAGCCCTGTATCGGAGGACATGGAAGAATCTCCTCGAAACAAAGAGAGG
ACCTCATATTTCAGTGAACCTGCCTATGGCCCAGTACCTCCATCTGAGCCTTCTCATGAT
TGGCAACATGCGAATGGATATGATGCAGTGCAAGCACAAGCGGTAGCTGGTGTTTACCAA
CCAGAGTGGCAAGATTATCAGTATCCTGAACAGGTGGCTTATCCTGAGCAATATCTCCAG
CAGAATTATGATATGCAAGCTGGTGTTGACGGTCTTCAGGATCCACAGTTTATGACTCAA
GAAGAAAAGGATAGAGGCCTAGGGTCAGTATTCAAGAGGGATGATCAGAGGCTTCTACAA
CTGAGAGAGAGAGATGCCAGAGAGAAGGATCCTAACTTTATTTCTGAAAGTTATTCGGAG
TGCTATCCTGGTTACCAAGAGTACAATCGTGAGGTTGTTGACAGTGATGATGAAGCTGAT
TTGTCAAAAATGGACATGGGTGGACGCGCAAAGGGCCGGCTTCATCGTTGGGACTTTGAG
ACAGAAGAGGAGTGGGCGACATACAATGAGCAGAAGGAAGCAATGCCGAAAGCTGCATTC
CAGTTTGGAGTGAAGATGCAGGATGGTAGGAAGACGAGGAAACAAAACAAAGACCAGAAG
CTTACCAATGAGCTGCATAAGATAAACAAAATACTCACCAGAAAGAAGATGGAGAAAGAC
AAAGGTGAAGCACTTGAAGACGGTGAAATACAACCTGGAAAGAAGCAGCGTGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027909
PEP Infomation

pacid=37434884 transcript=PGSC0003DMT400041169 locus=PGSC0003DMG401015931 ID=PGSC0003DMT400041169.v4.03 annot-version=v4.03
Sequence

MSSSKRNHKEKIVRRNKEEKVEEPELPKYRDRAKERREDQNPDYELTEFGGFHAVAPPGN
VDLLSADAQKLSIEKSKYLGGDVEHTHLVKGLDYALLHKVRSEIDKKPEAGDEAFEGKPR
GVKEDHQLSFRTATAKSVYQWIIKPQTVIKTNEMFLPGRMAFIFNMDSGYSNDIPTTLHR
SKADCPVLEEMVTVSVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKEKDSKGKTVIFNGYD
EVSKSDASKSQSDKETVHPSAQLPKKNHSERREDQGPAVARTEEEDIFIGEGVDYSVPAG
DMGQSPVSEDMEESPRNKERTSYFSEPAYGPVPPSEPSHDWQHANGYDAVQAQAVAGVYQ
PEWQDYQYPEQVAYPEQYLQQNYDMQAGVDGLQDPQFMTQEEKDRGLGSVFKRDDQRLLQ
LRERDAREKDPNFISESYSECYPGYQEYNREVVDSDDEADLSKMDMGGRAKGRLHRWDFE
TEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILTRKKMEKD
KGEALEDGEIQPGKKQRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400041169
Transcript Infomation

pacid=37434884 locus=PGSC0003DMG401015931 ID=PGSC0003DMT400041169.v4.03 annot-version=v4.03
Sequence

ATGTCTTCCTCCAAGCGAAATCACAAGGAAAAGATTGTTCGTCGCAACAAAGAAGAGAAG
GTTGAAGAGCCGGAGTTACCAAAGTACAGAGACAGAGCTAAAGAAAGGAGAGAAGATCAA
AATCCTGATTATGAACTCACTGAATTCGGTGGTTTTCATGCTGTTGCTCCTCCCGGGAAT
GTTGATCTCCTCTCTGCTGATGCTCAGAAATTATCTATTGAGAAGAGCAAGTATCTTGGA
GGTGATGTGGAACATACACATTTGGTGAAAGGGTTGGATTATGCTTTACTTCACAAAGTG
AGAAGTGAAATAGATAAGAAGCCAGAAGCTGGAGATGAGGCGTTTGAAGGAAAACCTAGA
GGTGTAAAGGAAGATCATCAATTGTCATTCCGCACTGCAACTGCCAAGTCAGTATACCAA
TGGATAATCAAGCCTCAGACTGTTATAAAGACCAATGAAATGTTTCTTCCTGGACGGATG
GCTTTTATTTTTAATATGGATAGTGGATACTCCAATGATATTCCTACAACTCTACACAGA
AGCAAAGCTGACTGTCCAGTCCTCGAGGAAATGGTTACAGTCAGTGTTGATGGTTCTGTT
CTAGACCGAATAGCTAAAATCATGTCCTATCTCCGTCTTGGATCATCAGGAAAAGTTCTC
AAAAAGAAGAAGAAGGAAAAAGATAGCAAAGGAAAGACAGTTATATTCAATGGTTATGAC
GAAGTATCGAAGTCTGATGCGTCAAAGAGCCAAAGTGATAAAGAAACCGTGCATCCATCT
GCACAACTTCCTAAAAAGAACCATTCAGAAAGAAGAGAGGATCAGGGACCTGCTGTTGCT
AGAACTGAAGAAGAAGATATCTTCATAGGGGAAGGTGTTGACTACTCCGTTCCTGCTGGA
GATATGGGTCAAAGCCCTGTATCGGAGGACATGGAAGAATCTCCTCGAAACAAAGAGAGG
ACCTCATATTTCAGTGAACCTGCCTATGGCCCAGTACCTCCATCTGAGCCTTCTCATGAT
TGGCAACATGCGAATGGATATGATGCAGTGCAAGCACAAGCGGTAGCTGGTGTTTACCAA
CCAGAGTGGCAAGATTATCAGTATCCTGAACAGGTGGCTTATCCTGAGCAATATCTCCAG
CAGAATTATGATATGCAAGCTGGTGTTGACGGTCTTCAGGATCCACAGTTTATGACTCAA
GAAGAAAAGGATAGAGGCCTAGGGTCAGTATTCAAGAGGGATGATCAGAGGCTTCTACAA
CTGAGAGAGAGAGATGCCAGAGAGAAGGATCCTAACTTTATTTCTGAAAGTTATTCGGAG
TGCTATCCTGGTTACCAAGAGTACAATCGTGAGGTTGTTGACAGTGATGATGAAGCTGAT
TTGTCAAAAATGGACATGGGTGGACGCGCAAAGGGCCGGCTTCATCGTTGGGACTTTGAG
ACAGAAGAGGAGTGGGCGACATACAATGAGCAGAAGGAAGCAATGCCGAAAGCTGCATTC
CAGTTTGGAGTGAAGATGCAGGATGGTAGGAAGACGAGGAAACAAAACAAAGACCAGAAG
CTTACCAATGAGCTGCATAAGATAAACAAAATACTCACCAGAAAGAAGATGGAGAAAGAC
AAAGGTGAAGCACTTGAAGACGGTGAAATACAACCTGGAAAGAAGCAGCGTGTATGA