Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041156
CDS Infomation

pacid=37434809 polypeptide=PGSC0003DMP400027897 locus=PGSC0003DMG401015926 ID=PGSC0003DMT400041156.v4.03 annot-version=v4.03
Sequence

ATGAATCCATGTCTTCCTGAATGGAATATTGAGACTGAACTTCCTGTTCCACATCAAAAG
AAGCCTATGGGATTTGATCATGAGCTAGTGGAGTTGTTGTGGCGAAACGGGGAGGTAGTA
TTACATAACCAAACACATAAAAAGCAGCCAGGCTATGATCCTAATGAATGCAGACAGTTT
AACAAATATGATCAACCAACAATAAGAGTTGCTGGAAATCAGACTAATTTGATTCAAGAT
GATGAAACTGTCTCGTGGCTAAACTGCCCTATCTATGATTCGTTTGACAAAGAATTTTGT
TCCCCTTTCTTATCTGATATTTCAACAAATCCTCACCTAGGGGAGGAACCTGATAAGTCA
ATTAGGCAATCAGAGGACAATAATAAGGTTTTCAAGCTTGATCCTTTAGAGATCAACCAT
GTTCTTCCGCAATCACATCATTCTGGTTTCAATCCAAATCCAATGCCACCTCCAAGATTT
CACAACTTTGGATCAGCACAACAGAAACATCATATAGTAGGGGGGAATCAGAAAGGTGTT
AACTTTCCTCCACCGATAAGGTCATCCAATGTGCAGCTTGGTGGCAAAGAAGCTAGAAGC
AATCTGATGCTGCAAGATATCAAAGAGGGGTCTGTGATGACAGTTGGTTCAAGCCACTGT
GGAAGCAATCAAGTTGATACTAGCAGGTTTTCAAGTAGTGCAAATAGAGGGTTGTCTGCA
GCAATGATCACTGATTATACCGGAAAAATCAGTCCACAAAGTGATACAATGGACCGAGAC
ACATTTGAACCAGCTAATACATCTTCGTCTTCAGGAAGATCGGGTAGTAGTTATGCAAGA
GCATGCAATCAATCTACAGCGACCAATAGCCAGGGCCACAAAAGGAAGAGTAGAGACGGT
GAAGAACCAGAATGCCAGAGTAAAGCTGATGAGCTAGAATCAGCTGGAGGAAACAAGGCA
GCCCAAAAATCTGGAACTGCCCGAAGGAGCCGTGCTGCAGAAGTGCATAATCTCTCTGAA
AGGAGACGGAGGGACAGAATCAATGAGAAAATGAAGGCCTTGCAAGAGCTTCTTCCTCAC
TCTACTAAGACAGACAAAGCATCAATGTTGGATGAGGCTATTGAATACTTGAAGTCACTT
CAGATGCAACTGCAGATGATGTGGATGGGAAGTGGCATGGCATCAATGATGTTTCCTGGT
GTCCAACACTACATGTCCAGAATGGGAATGGGGATGGGTCCGCCTTCGGTGCCTTCCATG
CACAATGCTATGCATTTAGCTAGGCTTCCTTTGGTTGATCCAGCAATCCCTTTGACACAA
GCTGCCCCTAATAATCAAGCAGCTGCAATGTGCCAGAATTCAATGTTGAATCAAGTTAAC
TATCAACGCCATTTGCAGAATCCCAATTTTCCAGAACAATATGCTAGTTACATGGGGTTC
CATCCACTTCAAGGCACTTCTCAGCCTATAAACATTTTTGGCTTAGGTTCACATACAGCA
CAGCGAAGTCAGCAGTTACCGCATCCAACTAATAGTAATGCACCCGCCACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027897
PEP Infomation

pacid=37434809 transcript=PGSC0003DMT400041156 locus=PGSC0003DMG401015926 ID=PGSC0003DMT400041156.v4.03 annot-version=v4.03
Sequence

MNPCLPEWNIETELPVPHQKKPMGFDHELVELLWRNGEVVLHNQTHKKQPGYDPNECRQF
NKYDQPTIRVAGNQTNLIQDDETVSWLNCPIYDSFDKEFCSPFLSDISTNPHLGEEPDKS
IRQSEDNNKVFKLDPLEINHVLPQSHHSGFNPNPMPPPRFHNFGSAQQKHHIVGGNQKGV
NFPPPIRSSNVQLGGKEARSNLMLQDIKEGSVMTVGSSHCGSNQVDTSRFSSSANRGLSA
AMITDYTGKISPQSDTMDRDTFEPANTSSSSGRSGSSYARACNQSTATNSQGHKRKSRDG
EEPECQSKADELESAGGNKAAQKSGTARRSRAAEVHNLSERRRRDRINEKMKALQELLPH
STKTDKASMLDEAIEYLKSLQMQLQMMWMGSGMASMMFPGVQHYMSRMGMGMGPPSVPSM
HNAMHLARLPLVDPAIPLTQAAPNNQAAAMCQNSMLNQVNYQRHLQNPNFPEQYASYMGF
HPLQGTSQPINIFGLGSHTAQRSQQLPHPTNSNAPAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400041156
Transcript Infomation

pacid=37434809 locus=PGSC0003DMG401015926 ID=PGSC0003DMT400041156.v4.03 annot-version=v4.03
Sequence

ATGAATCCATGTCTTCCTGAATGGAATATTGAGACTGAACTTCCTGTTCCACATCAAAAG
AAGCCTATGGGATTTGATCATGAGCTAGTGGAGTTGTTGTGGCGAAACGGGGAGGTAGTA
TTACATAACCAAACACATAAAAAGCAGCCAGGCTATGATCCTAATGAATGCAGACAGTTT
AACAAATATGATCAACCAACAATAAGAGTTGCTGGAAATCAGACTAATTTGATTCAAGAT
GATGAAACTGTCTCGTGGCTAAACTGCCCTATCTATGATTCGTTTGACAAAGAATTTTGT
TCCCCTTTCTTATCTGATATTTCAACAAATCCTCACCTAGGGGAGGAACCTGATAAGTCA
ATTAGGCAATCAGAGGACAATAATAAGGTTTTCAAGCTTGATCCTTTAGAGATCAACCAT
GTTCTTCCGCAATCACATCATTCTGGTTTCAATCCAAATCCAATGCCACCTCCAAGATTT
CACAACTTTGGATCAGCACAACAGAAACATCATATAGTAGGGGGGAATCAGAAAGGTGTT
AACTTTCCTCCACCGATAAGGTCATCCAATGTGCAGCTTGGTGGCAAAGAAGCTAGAAGC
AATCTGATGCTGCAAGATATCAAAGAGGGGTCTGTGATGACAGTTGGTTCAAGCCACTGT
GGAAGCAATCAAGTTGATACTAGCAGGTTTTCAAGTAGTGCAAATAGAGGGTTGTCTGCA
GCAATGATCACTGATTATACCGGAAAAATCAGTCCACAAAGTGATACAATGGACCGAGAC
ACATTTGAACCAGCTAATACATCTTCGTCTTCAGGAAGATCGGGTAGTAGTTATGCAAGA
GCATGCAATCAATCTACAGCGACCAATAGCCAGGGCCACAAAAGGAAGAGTAGAGACGGT
GAAGAACCAGAATGCCAGAGTAAAGCTGATGAGCTAGAATCAGCTGGAGGAAACAAGGCA
GCCCAAAAATCTGGAACTGCCCGAAGGAGCCGTGCTGCAGAAGTGCATAATCTCTCTGAA
AGGAGACGGAGGGACAGAATCAATGAGAAAATGAAGGCCTTGCAAGAGCTTCTTCCTCAC
TCTACTAAGACAGACAAAGCATCAATGTTGGATGAGGCTATTGAATACTTGAAGTCACTT
CAGATGCAACTGCAGATGATGTGGATGGGAAGTGGCATGGCATCAATGATGTTTCCTGGT
GTCCAACACTACATGTCCAGAATGGGAATGGGGATGGGTCCGCCTTCGGTGCCTTCCATG
CACAATGCTATGCATTTAGCTAGGCTTCCTTTGGTTGATCCAGCAATCCCTTTGACACAA
GCTGCCCCTAATAATCAAGCAGCTGCAATGTGCCAGAATTCAATGTTGAATCAAGTTAAC
TATCAACGCCATTTGCAGAATCCCAATTTTCCAGAACAATATGCTAGTTACATGGGGTTC
CATCCACTTCAAGGCACTTCTCAGCCTATAAACATTTTTGGCTTAGGTTCACATACAGCA
CAGCGAAGTCAGCAGTTACCGCATCCAACTAATAGTAATGCACCCGCCACTTGA