Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041150
CDS Infomation

pacid=37434502 polypeptide=PGSC0003DMP400027895 locus=PGSC0003DMG400015925 ID=PGSC0003DMT400041150.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCAACACAAGAGTAATCGTCAACTCCAAAGAGCTCCTTGCTTCTCAAGTGCT
GGACAGAGGGCCGAGGCTTCACCATCTGTCATTGTGATTGGTGGGGGAATTGCTGGCCTT
GCAGCTGCTCGGGCGCTTTATGATGCATCATTTCAGGTGGTTGTTTTGGAATCACGAGAT
AGGATTGGAGGCCGTGTTCACACTGACTACTCGTTTGGTTTTCCTGTTGACTTGGGTGCA
TCTTGGTTGCATGGTGTCTGCAAAGAGAATCCTCTGGCACCTCTCATTGGAAGACTAGGA
CTCCCTCTCTATCGTACAAGTGGTGACAATTCTGTGTTGTATGACCATGATCTAGAGAGT
TATGCTCTTTTTGACATGGATGGTAATCAAGTTCCCCAAGACTTAGTGACTAAGGTTGGC
GAAACATTTGAGAGCATTTTGAAAGAGACTGATAGAATTAGACAAGAATTCAGCGAAGAC
ATGTCTATTGGTCGCGCTATATCAATGGCTTTTGATAGGAGACCCGACTTAAGGCTCGAT
GGCATTGCTCATAAGGTGTTGCAGTGGTACCTTTGCAGAATGGAAGGCTGGTTTGCTGCA
GATGCTGATTCCATCTCACTCAAGTACTGGGACCAGGAAGAATTGCTTCCTGGTGGGCAT
GGTCTTATGGTTCGGGGGTATCGTCCTGTCATCAACACACTAGCAAAAGGGCTTGACATT
CGCATAGATCACAGGGTTACACAAGTAGTAAGACGTTATAATGGAGTGAAAGTGACTGTT
GAGGATGGGAGAACTTTTGTAGCTGATGCTGCCGTTGTTGCTGTTCCTCTTGGTGTTTTA
AAATCGAACCGGATCAAGTTTGAACCCAGATTACCTGAATGGAAGGAGGCTGCCATCAAT
GAACTAGGTGTAGGGATTGAAAACAAGATTATTCTGCACTTTGAAAAGGTTTTTTGGCCA
AATGTTGAGTTCTTGGGGGTAGTTGCTCAGAGCTCATATGAATGTAGTTACTTTTTGAAT
CTTCACAAGGCCACTGGCCATCCTGTCCTAGTTTATATGCCTGCGGGGCAGCTAGCCCGT
GACATTGAGAAACTATCAGATGAGGATGCTGCCAATTTTGCTTTTAAGCAACTTCAGAGG
ATTCTTCCCAATGCGACTACTCCGATCCAACATCTTGTTTCTCATTGGGGTACAGATGTA
AACTCACTCGGATCCTACAGCTACGATGCAGTAGGGAAGCCTCATGAGTTCTATGAAAGG
CTGAGGATACCGGTGGATAACATATTTTTTGCTGGAGAGGCGACGAGTATGGATTACCCA
GGTTCTGTACATGGTGCATATTCAACAGGACTAATGGCTGCTGAGGACTGCAGGATGCGT
GTCCTAGAGCGGTACGGAGAGGTGGATCTGTTCCAGCCAGTCATGGGTGAGGACACTCCT
GTTGCTGTCCCCTTATTGATCTCCCGTATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027895
PEP Infomation

pacid=37434502 transcript=PGSC0003DMT400041150 locus=PGSC0003DMG400015925 ID=PGSC0003DMT400041150.v4.03 annot-version=v4.03
Sequence

MDSQHKSNRQLQRAPCFSSAGQRAEASPSVIVIGGGIAGLAAARALYDASFQVVVLESRD
RIGGRVHTDYSFGFPVDLGASWLHGVCKENPLAPLIGRLGLPLYRTSGDNSVLYDHDLES
YALFDMDGNQVPQDLVTKVGETFESILKETDRIRQEFSEDMSIGRAISMAFDRRPDLRLD
GIAHKVLQWYLCRMEGWFAADADSISLKYWDQEELLPGGHGLMVRGYRPVINTLAKGLDI
RIDHRVTQVVRRYNGVKVTVEDGRTFVADAAVVAVPLGVLKSNRIKFEPRLPEWKEAAIN
ELGVGIENKIILHFEKVFWPNVEFLGVVAQSSYECSYFLNLHKATGHPVLVYMPAGQLAR
DIEKLSDEDAANFAFKQLQRILPNATTPIQHLVSHWGTDVNSLGSYSYDAVGKPHEFYER
LRIPVDNIFFAGEATSMDYPGSVHGAYSTGLMAAEDCRMRVLERYGEVDLFQPVMGEDTP
VAVPLLISRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400041150
Transcript Infomation

pacid=37434502 locus=PGSC0003DMG400015925 ID=PGSC0003DMT400041150.v4.03 annot-version=v4.03
Sequence

ATGGATTCTCAACACAAGAGTAATCGTCAACTCCAAAGAGCTCCTTGCTTCTCAAGTGCT
GGACAGAGGGCCGAGGCTTCACCATCTGTCATTGTGATTGGTGGGGGAATTGCTGGCCTT
GCAGCTGCTCGGGCGCTTTATGATGCATCATTTCAGGTGGTTGTTTTGGAATCACGAGAT
AGGATTGGAGGCCGTGTTCACACTGACTACTCGTTTGGTTTTCCTGTTGACTTGGGTGCA
TCTTGGTTGCATGGTGTCTGCAAAGAGAATCCTCTGGCACCTCTCATTGGAAGACTAGGA
CTCCCTCTCTATCGTACAAGTGGTGACAATTCTGTGTTGTATGACCATGATCTAGAGAGT
TATGCTCTTTTTGACATGGATGGTAATCAAGTTCCCCAAGACTTAGTGACTAAGGTTGGC
GAAACATTTGAGAGCATTTTGAAAGAGACTGATAGAATTAGACAAGAATTCAGCGAAGAC
ATGTCTATTGGTCGCGCTATATCAATGGCTTTTGATAGGAGACCCGACTTAAGGCTCGAT
GGCATTGCTCATAAGGTGTTGCAGTGGTACCTTTGCAGAATGGAAGGCTGGTTTGCTGCA
GATGCTGATTCCATCTCACTCAAGTACTGGGACCAGGAAGAATTGCTTCCTGGTGGGCAT
GGTCTTATGGTTCGGGGGTATCGTCCTGTCATCAACACACTAGCAAAAGGGCTTGACATT
CGCATAGATCACAGGGTTACACAAGTAGTAAGACGTTATAATGGAGTGAAAGTGACTGTT
GAGGATGGGAGAACTTTTGTAGCTGATGCTGCCGTTGTTGCTGTTCCTCTTGGTGTTTTA
AAATCGAACCGGATCAAGTTTGAACCCAGATTACCTGAATGGAAGGAGGCTGCCATCAAT
GAACTAGGTGTAGGGATTGAAAACAAGATTATTCTGCACTTTGAAAAGGTTTTTTGGCCA
AATGTTGAGTTCTTGGGGGTAGTTGCTCAGAGCTCATATGAATGTAGTTACTTTTTGAAT
CTTCACAAGGCCACTGGCCATCCTGTCCTAGTTTATATGCCTGCGGGGCAGCTAGCCCGT
GACATTGAGAAACTATCAGATGAGGATGCTGCCAATTTTGCTTTTAAGCAACTTCAGAGG
ATTCTTCCCAATGCGACTACTCCGATCCAACATCTTGTTTCTCATTGGGGTACAGATGTA
AACTCACTCGGATCCTACAGCTACGATGCAGTAGGGAAGCCTCATGAGTTCTATGAAAGG
CTGAGGATACCGGTGGATAACATATTTTTTGCTGGAGAGGCGACGAGTATGGATTACCCA
GGTTCTGTACATGGTGCATATTCAACAGGACTAATGGCTGCTGAGGACTGCAGGATGCGT
GTCCTAGAGCGGTACGGAGAGGTGGATCTGTTCCAGCCAGTCATGGGTGAGGACACTCCT
GTTGCTGTCCCCTTATTGATCTCCCGTATGTAA