Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041148
CDS Infomation

pacid=37432199 polypeptide=PGSC0003DMP400027893 locus=PGSC0003DMG400015924 ID=PGSC0003DMT400041148.v4.03 annot-version=v4.03
Sequence

ATGATGGTTTTCCTCAAACCATTCATTTCTCCTTCATCCTCTTCTCTTTGGAGTAAATCA
AATAGTGGTGAGAATTCATTGAACACAAATGTTAAAATATGTAAAAGAGCTGAAGTGGTG
TGTCAAGGCATGCTGACGCCAAGAAAGTTCATGCAGAAGAGGAGGAAAGTAGAGGTTTTC
AAGAGTACTGAGGATGAAGCAGACCAGAAAAACTGGAGAAAGATGATGAATGAAATTGAA
GAAGCTGGTTCTGCTGTTTCAGTGCTGAGAACCCAGAGGGACAAGAACCAGGCTCTTCCA
AAGAACCTTGTTCTTGGAAGCTTGGTTAGATTTAAGCAGCTTAAGAAGTGGAACCTTGTT
AGTGAGATTCTTGAATGGCTTCGAACTCAGCATTGGTGGGATTTTAATGAGATGGACTTT
CTGATGCTTATTACGGCCTACGGGAAGCAAGGGGACTTCAGTAAAGCTGAAAGGATTTTA
GGCTACATGAATAAGAAGGGCTATCCTGCCAATGTGATATCTCACACTGCTCTGATGGAG
GCATATGGAAAAGGAGGTCAGTACGCCAAGGCAGAAGCGATATTTCGGAGAATGCAAACT
TCAGGCCCTGAACCTTCTGCCATTACATACCAAATCATTCTCAAAATCTTTGTTGAGGGT
GACAAATTTAATGAAGCTCAAGAAGTCTTTGAAGCCCTTATGGATATGGATGCACCTCCT
CTAAAACCAGACCAGAAAATGTTCCACATGATGATCTATATGTATAAGAAGGCAGGAAAA
TATGAAAAAGCCCGTCATCTATTTTCTTTGATGGCCGAGCGAGGAATTCCACAAAATACA
GTTACTTACAACAGTTTGATGTCATTTGAGACCAACTATAAGGAGGTTGCAAACATATAT
GATCAGATGCAAAGAGCTGGTCTTCGACCTGATGTTGTTAGCTATGCACTGCTCATTAGT
GCATATGGAAAGGCTAGAAGAGAAGAGGAGGCACTAGCTGTTTTTGAGGAAATGCTTGAT
GCTGGTGTCAGGCCAACACAAAAGTCTTACAACATCTTGCTAGATGCATTTGCTATCTCA
GGAATGGTAGAACAGGCCCGGACTGTCTTCAAAAGCATGCGTAGAGACAGATGTAGCCCT
GACCTTTGCTCATACACAACAATGCTATCAGCTTATATTAATGCATCAGATATGGAAGGT
GCAGAGAAATTTTTCAGAAGAATAAAGCAAGATGGATTGGAGCCCAATGTTGTTACATAT
GGCACACTGATTAAGGGATATGCAAAAACAAATGACCTCGAAAAGATGATGGAGAAATAT
GAAGATATGCGGGTCCATGGTATCAAGGCTAACCAAACTATCTTCACTACAATCATGGAC
GCGTATGGCAGGAATAAGGATTTTGGCAGTGCCGTTGCTTGGTTCAATGAAATGGCATCT
TCCGGCGTCTCTCCTGATCAAAAAGCAAAGAACATTCTCTTGTCCTTGGCAAAAACATCA
GAAGAACAGATGGAAGCTAAGCAGATCACAGGATGTGCCAACGAGCTGATAGTCAACAGT
ATTCCCAGTGACATCAATGATAATGATGAAAACGAGTATGACGATGATGATGGAAGTGGT
GGTGATGATGATGACGACATTGATGAAAAAGAGAGCATTTTGTCAGGAGAAAAATTGGAT
AAACTGATAATTAGTGGAAGTGCTGCATCTCAGACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400027893
PEP Infomation

pacid=37432199 transcript=PGSC0003DMT400041148 locus=PGSC0003DMG400015924 ID=PGSC0003DMT400041148.v4.03 annot-version=v4.03
Sequence

MMVFLKPFISPSSSSLWSKSNSGENSLNTNVKICKRAEVVCQGMLTPRKFMQKRRKVEVF
KSTEDEADQKNWRKMMNEIEEAGSAVSVLRTQRDKNQALPKNLVLGSLVRFKQLKKWNLV
SEILEWLRTQHWWDFNEMDFLMLITAYGKQGDFSKAERILGYMNKKGYPANVISHTALME
AYGKGGQYAKAEAIFRRMQTSGPEPSAITYQIILKIFVEGDKFNEAQEVFEALMDMDAPP
LKPDQKMFHMMIYMYKKAGKYEKARHLFSLMAERGIPQNTVTYNSLMSFETNYKEVANIY
DQMQRAGLRPDVVSYALLISAYGKARREEEALAVFEEMLDAGVRPTQKSYNILLDAFAIS
GMVEQARTVFKSMRRDRCSPDLCSYTTMLSAYINASDMEGAEKFFRRIKQDGLEPNVVTY
GTLIKGYAKTNDLEKMMEKYEDMRVHGIKANQTIFTTIMDAYGRNKDFGSAVAWFNEMAS
SGVSPDQKAKNILLSLAKTSEEQMEAKQITGCANELIVNSIPSDINDNDENEYDDDDGSG
GDDDDDIDEKESILSGEKLDKLIISGSAASQT*

Transcript Sequence

Transcript ID

PGSC0003DMT400041148
Transcript Infomation

pacid=37432199 locus=PGSC0003DMG400015924 ID=PGSC0003DMT400041148.v4.03 annot-version=v4.03
Sequence

ATGATGGTTTTCCTCAAACCATTCATTTCTCCTTCATCCTCTTCTCTTTGGAGTAAATCA
AATAGTGGTGAGAATTCATTGAACACAAATGTTAAAATATGTAAAAGAGCTGAAGTGGTG
TGTCAAGGCATGCTGACGCCAAGAAAGTTCATGCAGAAGAGGAGGAAAGTAGAGGTTTTC
AAGAGTACTGAGGATGAAGCAGACCAGAAAAACTGGAGAAAGATGATGAATGAAATTGAA
GAAGCTGGTTCTGCTGTTTCAGTGCTGAGAACCCAGAGGGACAAGAACCAGGCTCTTCCA
AAGAACCTTGTTCTTGGAAGCTTGGTTAGATTTAAGCAGCTTAAGAAGTGGAACCTTGTT
AGTGAGATTCTTGAATGGCTTCGAACTCAGCATTGGTGGGATTTTAATGAGATGGACTTT
CTGATGCTTATTACGGCCTACGGGAAGCAAGGGGACTTCAGTAAAGCTGAAAGGATTTTA
GGCTACATGAATAAGAAGGGCTATCCTGCCAATGTGATATCTCACACTGCTCTGATGGAG
GCATATGGAAAAGGAGGTCAGTACGCCAAGGCAGAAGCGATATTTCGGAGAATGCAAACT
TCAGGCCCTGAACCTTCTGCCATTACATACCAAATCATTCTCAAAATCTTTGTTGAGGGT
GACAAATTTAATGAAGCTCAAGAAGTCTTTGAAGCCCTTATGGATATGGATGCACCTCCT
CTAAAACCAGACCAGAAAATGTTCCACATGATGATCTATATGTATAAGAAGGCAGGAAAA
TATGAAAAAGCCCGTCATCTATTTTCTTTGATGGCCGAGCGAGGAATTCCACAAAATACA
GTTACTTACAACAGTTTGATGTCATTTGAGACCAACTATAAGGAGGTTGCAAACATATAT
GATCAGATGCAAAGAGCTGGTCTTCGACCTGATGTTGTTAGCTATGCACTGCTCATTAGT
GCATATGGAAAGGCTAGAAGAGAAGAGGAGGCACTAGCTGTTTTTGAGGAAATGCTTGAT
GCTGGTGTCAGGCCAACACAAAAGTCTTACAACATCTTGCTAGATGCATTTGCTATCTCA
GGAATGGTAGAACAGGCCCGGACTGTCTTCAAAAGCATGCGTAGAGACAGATGTAGCCCT
GACCTTTGCTCATACACAACAATGCTATCAGCTTATATTAATGCATCAGATATGGAAGGT
GCAGAGAAATTTTTCAGAAGAATAAAGCAAGATGGATTGGAGCCCAATGTTGTTACATAT
GGCACACTGATTAAGGGATATGCAAAAACAAATGACCTCGAAAAGATGATGGAGAAATAT
GAAGATATGCGGGTCCATGGTATCAAGGCTAACCAAACTATCTTCACTACAATCATGGAC
GCGTATGGCAGGAATAAGGATTTTGGCAGTGCCGTTGCTTGGTTCAATGAAATGGCATCT
TCCGGCGTCTCTCCTGATCAAAAAGCAAAGAACATTCTCTTGTCCTTGGCAAAAACATCA
GAAGAACAGATGGAAGCTAAGCAGATCACAGGATGTGCCAACGAGCTGATAGTCAACAGT
ATTCCCAGTGACATCAATGATAATGATGAAAACGAGTATGACGATGATGATGGAAGTGGT
GGTGATGATGATGACGACATTGATGAAAAAGAGAGCATTTTGTCAGGAGAAAAATTGGAT
AAACTGATAATTAGTGGAAGTGCTGCATCTCAGACATAA