Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041144
CDS Infomation

pacid=37433756 polypeptide=PGSC0003DMP400027890 locus=PGSC0003DMG400015923 ID=PGSC0003DMT400041144.v4.03 annot-version=v4.03
Sequence

ATGAATAAGTTCTTCAAAACCTCCAAAGTGGCTCTCAGGTTCTTTAATGGCGGCCTCAAC
CGAAGCAATTACGGAGTCCGCCAGCTGTCTCAATTTGCTGGTGACTTTGAAACTGAGTCC
AGAAAATTACTGGAGGGTGTTGTTACGAATTCCGCTAATTATGTTCCATTGACACCAATA
AGTTTCTTGGAGAGAGCAGCAGATGTTTATCGCCATAAAACTTCCGTTGTGTTTGGGTCT
TGTGTGAAGTATACATGGGAAGAGACACACTCTAGGTGTCTCAAACTTGCTTCTGCTTTG
GTTCAGCTAGGAATTTCAAGGGGAGATGTGGTTGCAGCTTTGGCTCCCAATGTACCAGCA
ATGCAGGAGCTGCATTTCGCAGTACCAATGGCGGAAGCAGTTCTTTGTACATTAAATACT
CGTCTTGATTCATCAATGGTAGCTCATTTACTGAAACATTCAGAAGCGAAGATAATATTT
GTTGATCAACAATTGCTCCAAGTTGCTCAACAAGCACTCTCTCTTCTTTCAAAAGACAAA
ATTAAACCACCAATTCTTGTGCTAATACCTGAATATGAGAATTCCTCTCCGACCAATGAC
ATTCATGAATACGAAAATCTTTTATCAAGTGGGAGTAGCAATTTTACAATAAGATTGCCA
AAAAGTGAATTTGATCCTATCAGTATCAATTATACTTCTGGCACAGTGTCGTCACCAAAA
GGGGTTGTGTACAATCACAGAGGTGCATATCTCAATTCTATTTCTACTTTCCTCTGTCAT
GGTATGGGTCCGATGCCATCGTACCTTTGGACACTTCCAATGTTTCACTGCAATGGATGG
TGCATGATTTGGGGAATGGCTGCACTTGGTGGCACAAATGTTTGCCTTAGGAATGTCTCC
GCAAAAAATATATTTGAAAGTATTTCTCTCAACAAGGTCACACATATGAGTGCAGCACCA
ATTATCTTGAGTATGATGGCAAATTCTTCACCAAATGATAGGAAGCCACTTCCCCATAAG
GTCGAAATAATGACAGGCGGATCACCACCGCCTCCACAAATTCTTTCCAAAATGGAGCAA
CTCGGATTTGGAGTATCCCATGGATATGGACTAACAGAAACTTATAGTGCTGCTACGATT
TGCTTTTGGAAGCCTGAGTGGGATTCTTTGCCCCTTGAGGAACGAGCTGCGCTTAAATCA
AGACAAGGGGTGCAACATCTTTGTATAGAAAAAGTTGATGTTAGAGATCCCGAGACCATG
GAAAAGGTGCCAGCTGATGGGAAGAGCATTGGTGAGATTGTGTGCAGAGGGAATACTGTG
ATGAGTGGATATTTGAAAGATGCTAAAGCAACCGAAGAAGCTTTTAGAGGCGGATGGTTT
CATAGTGGTGATCTTGCAGTGAAACATCCAGATGGGTACATAGAAATTAAGGATCGATTG
AAGGACATTATAATTTCTGGAGGTGAAAATATAAGCACACTCGAAGTGGAGAGAGTATTA
TATAGTCATCCAGCAGTCGTCGAAGCAGCTGTGGTCGCACGACCAGATGATCAATGGGGA
CAAACACCTTGTGCATTCATAACACTAAAGGAAGGATTTGATGAAATTACTGAGCAAGAG
ATAATCAACTTCTGTAGAGATCATTTGCCTCGTTACATGGCACCTCGAACGGTCCTTTTT
GAAGATTTACCAAAAACATCAACTGGCAAGGTACAAAAATTCATATTGAGGGAGAAAGCA
AAAGCTTTGGGCAGTCTATTTTCCACTGAAAAGATAAGTGCTGCAAGTTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027890
PEP Infomation

pacid=37433756 transcript=PGSC0003DMT400041144 locus=PGSC0003DMG400015923 ID=PGSC0003DMT400041144.v4.03 annot-version=v4.03
Sequence

MNKFFKTSKVALRFFNGGLNRSNYGVRQLSQFAGDFETESRKLLEGVVTNSANYVPLTPI
SFLERAADVYRHKTSVVFGSCVKYTWEETHSRCLKLASALVQLGISRGDVVAALAPNVPA
MQELHFAVPMAEAVLCTLNTRLDSSMVAHLLKHSEAKIIFVDQQLLQVAQQALSLLSKDK
IKPPILVLIPEYENSSPTNDIHEYENLLSSGSSNFTIRLPKSEFDPISINYTSGTVSSPK
GVVYNHRGAYLNSISTFLCHGMGPMPSYLWTLPMFHCNGWCMIWGMAALGGTNVCLRNVS
AKNIFESISLNKVTHMSAAPIILSMMANSSPNDRKPLPHKVEIMTGGSPPPPQILSKMEQ
LGFGVSHGYGLTETYSAATICFWKPEWDSLPLEERAALKSRQGVQHLCIEKVDVRDPETM
EKVPADGKSIGEIVCRGNTVMSGYLKDAKATEEAFRGGWFHSGDLAVKHPDGYIEIKDRL
KDIIISGGENISTLEVERVLYSHPAVVEAAVVARPDDQWGQTPCAFITLKEGFDEITEQE
IINFCRDHLPRYMAPRTVLFEDLPKTSTGKVQKFILREKAKALGSLFSTEKISAASC*

Transcript Sequence

Transcript ID

PGSC0003DMT400041144
Transcript Infomation

pacid=37433756 locus=PGSC0003DMG400015923 ID=PGSC0003DMT400041144.v4.03 annot-version=v4.03
Sequence

ATGAATAAGTTCTTCAAAACCTCCAAAGTGGCTCTCAGGTTCTTTAATGGCGGCCTCAAC
CGAAGCAATTACGGAGTCCGCCAGCTGTCTCAATTTGCTGGTGACTTTGAAACTGAGTCC
AGAAAATTACTGGAGGGTGTTGTTACGAATTCCGCTAATTATGTTCCATTGACACCAATA
AGTTTCTTGGAGAGAGCAGCAGATGTTTATCGCCATAAAACTTCCGTTGTGTTTGGGTCT
TGTGTGAAGTATACATGGGAAGAGACACACTCTAGGTGTCTCAAACTTGCTTCTGCTTTG
GTTCAGCTAGGAATTTCAAGGGGAGATGTGGTTGCAGCTTTGGCTCCCAATGTACCAGCA
ATGCAGGAGCTGCATTTCGCAGTACCAATGGCGGAAGCAGTTCTTTGTACATTAAATACT
CGTCTTGATTCATCAATGGTAGCTCATTTACTGAAACATTCAGAAGCGAAGATAATATTT
GTTGATCAACAATTGCTCCAAGTTGCTCAACAAGCACTCTCTCTTCTTTCAAAAGACAAA
ATTAAACCACCAATTCTTGTGCTAATACCTGAATATGAGAATTCCTCTCCGACCAATGAC
ATTCATGAATACGAAAATCTTTTATCAAGTGGGAGTAGCAATTTTACAATAAGATTGCCA
AAAAGTGAATTTGATCCTATCAGTATCAATTATACTTCTGGCACAGTGTCGTCACCAAAA
GGGGTTGTGTACAATCACAGAGGTGCATATCTCAATTCTATTTCTACTTTCCTCTGTCAT
GGTATGGGTCCGATGCCATCGTACCTTTGGACACTTCCAATGTTTCACTGCAATGGATGG
TGCATGATTTGGGGAATGGCTGCACTTGGTGGCACAAATGTTTGCCTTAGGAATGTCTCC
GCAAAAAATATATTTGAAAGTATTTCTCTCAACAAGGTCACACATATGAGTGCAGCACCA
ATTATCTTGAGTATGATGGCAAATTCTTCACCAAATGATAGGAAGCCACTTCCCCATAAG
GTCGAAATAATGACAGGCGGATCACCACCGCCTCCACAAATTCTTTCCAAAATGGAGCAA
CTCGGATTTGGAGTATCCCATGGATATGGACTAACAGAAACTTATAGTGCTGCTACGATT
TGCTTTTGGAAGCCTGAGTGGGATTCTTTGCCCCTTGAGGAACGAGCTGCGCTTAAATCA
AGACAAGGGGTGCAACATCTTTGTATAGAAAAAGTTGATGTTAGAGATCCCGAGACCATG
GAAAAGGTGCCAGCTGATGGGAAGAGCATTGGTGAGATTGTGTGCAGAGGGAATACTGTG
ATGAGTGGATATTTGAAAGATGCTAAAGCAACCGAAGAAGCTTTTAGAGGCGGATGGTTT
CATAGTGGTGATCTTGCAGTGAAACATCCAGATGGGTACATAGAAATTAAGGATCGATTG
AAGGACATTATAATTTCTGGAGGTGAAAATATAAGCACACTCGAAGTGGAGAGAGTATTA
TATAGTCATCCAGCAGTCGTCGAAGCAGCTGTGGTCGCACGACCAGATGATCAATGGGGA
CAAACACCTTGTGCATTCATAACACTAAAGGAAGGATTTGATGAAATTACTGAGCAAGAG
ATAATCAACTTCTGTAGAGATCATTTGCCTCGTTACATGGCACCTCGAACGGTCCTTTTT
GAAGATTTACCAAAAACATCAACTGGCAAGGTACAAAAATTCATATTGAGGGAGAAAGCA
AAAGCTTTGGGCAGTCTATTTTCCACTGAAAAGATAAGTGCTGCAAGTTGTTAG