Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041135
CDS Infomation

pacid=37433332 polypeptide=PGSC0003DMP400027887 locus=PGSC0003DMG400015920 ID=PGSC0003DMT400041135.v4.03 annot-version=v4.03
Sequence

ATGCCGGCGAAGAATATGTTGTTTCGGTTAGGGATATTCCTATCCTTGTTTTTGCTCAAT
CCGATTCCATCTCAATCTGCAGTTTCCAGCATAGATCTGGGATCAGAATGGTTCAAAGTC
GCCGTGGTTAACCTAAAACCCGGACAACCTCCAATCTCTATAGCGATTAACGAAATGTCC
AAACGGAAAACTCCCTCACTCGTCGCATTTCACTCTGGGAGTCGCCTCATCGGTGAAGAA
GCTTCTGGAATCGTCGCTCGTTATCCAAACAAGGTCTATTCTCATCTCCGTGATCTAATA
TCAAAACCCTTTTCCCACGTTTCCAAAACCCTAGAATCTCTTTACCTGAGTTACGACATT
TCTCCCGAGGAATCGCGGAATGTGGCGGTTTTTAAAACTGAAAATGGTAATTTTACGGCG
GAGGAGTTGGTAGCGATGTTGTTCAAGTATGCTCTTGGATTGGCGGAAGCGCATACTAGG
GGAACACCGGTGAAGGATGCTGTGGTGACTGTGCCTCCGTATATGGGAGTAGCGGAGAGG
AAAGGGCTGCTTGTTGCTGCGGAATTGGCTGGTATTAATGTGTTGGCGCTTGTGAATGAA
CATTCTGGTGCAGCGTTGCAGTATGGGATTGATAAAGATTTTTCTAATGGTTCAAGGCAT
GTGATTTTCTATGATATGGGTGCGGGTAGTACATATGCTGCCTTGGTGTATTTCTCTGCT
TATAATACTAAGGAGTTTGGGAAGACTGTATCAGCTAACCAATTTCAGGTCAAGGATGTT
AGATGGGATGCGGAGCTGGGAGGAGAACATATGGAACTAAGATTGGTGGAGCACTTTGCA
GATGAGTTCAATAAACAGGTAGGAAATGGGGTTGACATAAGGAAGTCTCCAAAGGCAATG
GCAAAGTTGAAGAAGCAAGTCAAACGAACAAAGGAAATTCTTAGTGCAAACACAGCAGCT
CCAATTTCAGTTGAATCTATTTATGATGATCGGGATTTTAGGAGCTCAATAACCCGTGAG
AAGTTTGAAGAGTTATGTGCCGATTTGTGGGAAAAAGCTCTAGTACCATTGAAGGAAGTT
CTTACTCATTCTGGTTTGAAAATAGAAGACATTTATGCAGTGGAGTTGATTGGAGGTGCC
ACTAGGGTGCCAAAATTGCAGGCTAAGCTGCAGGAATTTCTTGGAAGGAAAGAACTGGAC
AGACACTTGGACTCCGATGAAGCAATTACACTTGGGGCATCATTGCATGCTGCTAATATA
AGTGATGGAATCAAATTGAATCGTAAATTGGGAATGATTGATGGTTCTCCATATGGATAT
GTGATTGAAGTAGATGGTCCAGATCTTCCTAAAGATGAAAGCACCAAACAGTTGACCATA
CCACGTATGAAGAAACTACCTAGCAAGATGTTCAGATCTATTGTTCACAAAAAGGATTTT
GAAGTTTCACTAGCGTATGAAAGCGATGACTTCTTGCCACCTGGAACTACTTCACGTACA
TTTGCTCAGTATGCAGTGTCAGGTCTTACTGATGCCAGCGAGAAGTATGCATCACGGAAT
CTTTCTGCCCCTGTCAAGGCTAATTTACATTTCTCACTTAGTAGAAGTGGAATATTTTCA
TTAGATCGAGCAGATGCTGTTATTGAAATAACTGAATGGGTCGAAGTTCCACTAAAGAAT
CTGACAGTGGACAACTCGACCTCTGCTTCTGTGAACACATCAACTGAAAGTGGCCCCACT
AGTACAGAGGAAAGCGATGAAAAGTTGAATACAGACACTGTTAATAGTAACACCTCTGAT
CCTGGTACAAATGATTCTAGCACCATAAGTCCCGTTACAGAGAAGAAGCTGAAGAAACGG
ACTTTCCGAGTTCCACTTAAGATTGATGAGAAGATTACTGGGCCAGGAGCACCTCTTTCA
AAAGAATCTTTTAGTGAAGCTAAAAGAAAATTGGAAGCACTGGACAAAAAAGACGAAGAA
AGAAGAAGAACGGCTGAATTGAAGAATAGCTTGGAAGGATACATATATGATACAAGAGAC
AAGCTTGAATCTGGAGATTTTGTGAAAATATCAACCAGTCAAGAGTGCCAGTCCTTTATT
GAGAAACTTGATGAGGTACAAGAATGGTTGTACACAGATGGTGAAGATGCTTCTGCCACC
CAGTTTCAAGAGCATTTAGATAAATTGAAAGCTATTGGGGATCCCATATTTTTCAGACAT
AAAGAACTTACTGCACGCCCTGCTGCATCTGATCATGCTCGCAAATACCTTAATGAAGTG
CAACAGATTGTGCGTGGATGGGAAACCAACAAATCATGGCTTCCTAAGGGAAAAATAGAT
GAGGTTCTAAATGAAGCTGAGAAAGTGAAGAAATGGTTAAATCAGAAGGAGGCTGAACAG
AAAGACACTCCTGGATCTGATATGCCTGCATTTACTTCTGAAGAAGTATATGTAAAGGTT
TTTGATCTTCAAGACAAGGTTAACAAGGTAAATAAAATACCAAAGCCAAAGCCTAAGGTT
GAGAAGCCTTTGAAAAATGAAACTGAAAACAGCAAGGAGAAAGCAGACACTACCAAATCC
TCTTCTGAGGAGGGTACCTCCCAGAAAGAACAAACAGCTGCAGAGGCAGAGAAGGCATCC
GCAGATGAAAAGTCGGATCATGATGAGTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027887
PEP Infomation

pacid=37433332 transcript=PGSC0003DMT400041135 locus=PGSC0003DMG400015920 ID=PGSC0003DMT400041135.v4.03 annot-version=v4.03
Sequence

MPAKNMLFRLGIFLSLFLLNPIPSQSAVSSIDLGSEWFKVAVVNLKPGQPPISIAINEMS
KRKTPSLVAFHSGSRLIGEEASGIVARYPNKVYSHLRDLISKPFSHVSKTLESLYLSYDI
SPEESRNVAVFKTENGNFTAEELVAMLFKYALGLAEAHTRGTPVKDAVVTVPPYMGVAER
KGLLVAAELAGINVLALVNEHSGAALQYGIDKDFSNGSRHVIFYDMGAGSTYAALVYFSA
YNTKEFGKTVSANQFQVKDVRWDAELGGEHMELRLVEHFADEFNKQVGNGVDIRKSPKAM
AKLKKQVKRTKEILSANTAAPISVESIYDDRDFRSSITREKFEELCADLWEKALVPLKEV
LTHSGLKIEDIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDSDEAITLGASLHAANI
SDGIKLNRKLGMIDGSPYGYVIEVDGPDLPKDESTKQLTIPRMKKLPSKMFRSIVHKKDF
EVSLAYESDDFLPPGTTSRTFAQYAVSGLTDASEKYASRNLSAPVKANLHFSLSRSGIFS
LDRADAVIEITEWVEVPLKNLTVDNSTSASVNTSTESGPTSTEESDEKLNTDTVNSNTSD
PGTNDSSTISPVTEKKLKKRTFRVPLKIDEKITGPGAPLSKESFSEAKRKLEALDKKDEE
RRRTAELKNSLEGYIYDTRDKLESGDFVKISTSQECQSFIEKLDEVQEWLYTDGEDASAT
QFQEHLDKLKAIGDPIFFRHKELTARPAASDHARKYLNEVQQIVRGWETNKSWLPKGKID
EVLNEAEKVKKWLNQKEAEQKDTPGSDMPAFTSEEVYVKVFDLQDKVNKVNKIPKPKPKV
EKPLKNETENSKEKADTTKSSSEEGTSQKEQTAAEAEKASADEKSDHDEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400041135
Transcript Infomation

pacid=37433332 locus=PGSC0003DMG400015920 ID=PGSC0003DMT400041135.v4.03 annot-version=v4.03
Sequence

ATGCCGGCGAAGAATATGTTGTTTCGGTTAGGGATATTCCTATCCTTGTTTTTGCTCAAT
CCGATTCCATCTCAATCTGCAGTTTCCAGCATAGATCTGGGATCAGAATGGTTCAAAGTC
GCCGTGGTTAACCTAAAACCCGGACAACCTCCAATCTCTATAGCGATTAACGAAATGTCC
AAACGGAAAACTCCCTCACTCGTCGCATTTCACTCTGGGAGTCGCCTCATCGGTGAAGAA
GCTTCTGGAATCGTCGCTCGTTATCCAAACAAGGTCTATTCTCATCTCCGTGATCTAATA
TCAAAACCCTTTTCCCACGTTTCCAAAACCCTAGAATCTCTTTACCTGAGTTACGACATT
TCTCCCGAGGAATCGCGGAATGTGGCGGTTTTTAAAACTGAAAATGGTAATTTTACGGCG
GAGGAGTTGGTAGCGATGTTGTTCAAGTATGCTCTTGGATTGGCGGAAGCGCATACTAGG
GGAACACCGGTGAAGGATGCTGTGGTGACTGTGCCTCCGTATATGGGAGTAGCGGAGAGG
AAAGGGCTGCTTGTTGCTGCGGAATTGGCTGGTATTAATGTGTTGGCGCTTGTGAATGAA
CATTCTGGTGCAGCGTTGCAGTATGGGATTGATAAAGATTTTTCTAATGGTTCAAGGCAT
GTGATTTTCTATGATATGGGTGCGGGTAGTACATATGCTGCCTTGGTGTATTTCTCTGCT
TATAATACTAAGGAGTTTGGGAAGACTGTATCAGCTAACCAATTTCAGGTCAAGGATGTT
AGATGGGATGCGGAGCTGGGAGGAGAACATATGGAACTAAGATTGGTGGAGCACTTTGCA
GATGAGTTCAATAAACAGGTAGGAAATGGGGTTGACATAAGGAAGTCTCCAAAGGCAATG
GCAAAGTTGAAGAAGCAAGTCAAACGAACAAAGGAAATTCTTAGTGCAAACACAGCAGCT
CCAATTTCAGTTGAATCTATTTATGATGATCGGGATTTTAGGAGCTCAATAACCCGTGAG
AAGTTTGAAGAGTTATGTGCCGATTTGTGGGAAAAAGCTCTAGTACCATTGAAGGAAGTT
CTTACTCATTCTGGTTTGAAAATAGAAGACATTTATGCAGTGGAGTTGATTGGAGGTGCC
ACTAGGGTGCCAAAATTGCAGGCTAAGCTGCAGGAATTTCTTGGAAGGAAAGAACTGGAC
AGACACTTGGACTCCGATGAAGCAATTACACTTGGGGCATCATTGCATGCTGCTAATATA
AGTGATGGAATCAAATTGAATCGTAAATTGGGAATGATTGATGGTTCTCCATATGGATAT
GTGATTGAAGTAGATGGTCCAGATCTTCCTAAAGATGAAAGCACCAAACAGTTGACCATA
CCACGTATGAAGAAACTACCTAGCAAGATGTTCAGATCTATTGTTCACAAAAAGGATTTT
GAAGTTTCACTAGCGTATGAAAGCGATGACTTCTTGCCACCTGGAACTACTTCACGTACA
TTTGCTCAGTATGCAGTGTCAGGTCTTACTGATGCCAGCGAGAAGTATGCATCACGGAAT
CTTTCTGCCCCTGTCAAGGCTAATTTACATTTCTCACTTAGTAGAAGTGGAATATTTTCA
TTAGATCGAGCAGATGCTGTTATTGAAATAACTGAATGGGTCGAAGTTCCACTAAAGAAT
CTGACAGTGGACAACTCGACCTCTGCTTCTGTGAACACATCAACTGAAAGTGGCCCCACT
AGTACAGAGGAAAGCGATGAAAAGTTGAATACAGACACTGTTAATAGTAACACCTCTGAT
CCTGGTACAAATGATTCTAGCACCATAAGTCCCGTTACAGAGAAGAAGCTGAAGAAACGG
ACTTTCCGAGTTCCACTTAAGATTGATGAGAAGATTACTGGGCCAGGAGCACCTCTTTCA
AAAGAATCTTTTAGTGAAGCTAAAAGAAAATTGGAAGCACTGGACAAAAAAGACGAAGAA
AGAAGAAGAACGGCTGAATTGAAGAATAGCTTGGAAGGATACATATATGATACAAGAGAC
AAGCTTGAATCTGGAGATTTTGTGAAAATATCAACCAGTCAAGAGTGCCAGTCCTTTATT
GAGAAACTTGATGAGGTACAAGAATGGTTGTACACAGATGGTGAAGATGCTTCTGCCACC
CAGTTTCAAGAGCATTTAGATAAATTGAAAGCTATTGGGGATCCCATATTTTTCAGACAT
AAAGAACTTACTGCACGCCCTGCTGCATCTGATCATGCTCGCAAATACCTTAATGAAGTG
CAACAGATTGTGCGTGGATGGGAAACCAACAAATCATGGCTTCCTAAGGGAAAAATAGAT
GAGGTTCTAAATGAAGCTGAGAAAGTGAAGAAATGGTTAAATCAGAAGGAGGCTGAACAG
AAAGACACTCCTGGATCTGATATGCCTGCATTTACTTCTGAAGAAGTATATGTAAAGGTT
TTTGATCTTCAAGACAAGGTTAACAAGGTAAATAAAATACCAAAGCCAAAGCCTAAGGTT
GAGAAGCCTTTGAAAAATGAAACTGAAAACAGCAAGGAGAAAGCAGACACTACCAAATCC
TCTTCTGAGGAGGGTACCTCCCAGAAAGAACAAACAGCTGCAGAGGCAGAGAAGGCATCC
GCAGATGAAAAGTCGGATCATGATGAGTTATGA