Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041127
CDS Infomation

pacid=37433264 polypeptide=PGSC0003DMP400027884 locus=PGSC0003DMG400015919 ID=PGSC0003DMT400041127.v4.03 annot-version=v4.03
Sequence

ATGAGGGTATCATCATCTGGGTTCAATCCTCAGCAAGAGGAAGCAGGGGAGAAGAAATGC
TTGAATTCAGAGCTGTGGCACGCGTGTGCAGGACCACTAGTTTCACTTCCACCTGTAGGA
AGCAGAGTTGTGTATTTTCCTCAAGGGCACAGTGAGCAGGTTGCTGCCTCAACCAACAAG
GAAGTAGATGCTCATATCCCTAATTATCCTGGTTTACCGCCTCAACTAATTTGTCAGCTT
CACAACCTGACAATGCATGCAGATGTTGAAACTGATGAAGTATATGCTCAAATGACATTG
CAGCCACTAAGTCCACAAGAGCAAAAGGATGTGTGCCTGTTACCAGCAGAACTTGGCATC
CCGAGTAAACAACCAACCAACTATTTCTGCAAAACTTTGACGGCAAGTGACACCAGTACT
CATGGTGGATTCTCTGTCCCTCGCCGAGCAGCAGAAAAAGTTTTCCCCCCTCTTGATTAC
TCTCAGCAGCCACCCTGTCAAGAGTTGATTGCAAAAGATCTCCATGGGAATGAATGGAAA
TTCCGGCATATTTTTCGCGGACAACCGAAGAGGCATCTATTGACAACCGGATGGAGTGTG
TTTGTGAGTGCAAAGAGACTTGTTGCAGGCGATGCAGTCATCTTTATCTGGAACGAAAAC
AATCAATTGCTTTTGGGGATTCGACGTGCTAATCGTCCTCAAACTGTCATGCCTTCTTCA
GTCTTGTCAAGTGATAGCATGCACATTGGTCTCCTAGCTGCAGCGGCTCATGCAGCTGCA
ACTAATAGCCGCTTTACAATATTTTATAATCCAAGGGCCAGCCCATCAGAGTTTGTCATA
CCTCTGGCTAAGTATGCTAAAGCAGTGTATCATACTCGAATATCTGTTGGTATGAGGTTC
CGGATGCTGTTTGAAACAGAAGAATCAAGTGTCCGTAGGTACATGGGCACAATTACTGGC
ATCAGTGATTTAGATCCTGTTCGTTGGCCAAATTCACACTGGCGGTCTGTGAAGGTTGGA
TGGGATGAATCAACTGCTGGAGAGAGGCAGCCCAGAGTTTCTCTGTGGGAAATTGAACCT
CTGACAACATTTCCTATGTATCCTTCTCCTTTCTCCCTTAGGCTAAAGCGGCCTTGGCCA
TCTGGACTACCTTCTCTCCCTGGTTTCCCAAATGGTGATATGACTATGAATTCTCCACTC
TCATGGCTGCGTGGTGACATGGGAGATCAAGGGATGCAGTCGCTTAATTTCCAGGGATTT
GGTGTTACTCCGTTTATGCAACCAAGAATGGATGCTTCTATGTTAGGTTTGCAACCTGAC
ATTCTGCAAACAATGGCAGCACTAGATCCATCGAAACTTGCAAATCAATCCCTTATGCAG
TTCCAACATAGTATTCCTAACAGTTCAGCGCCTTTGAGTCAGAGTCAGATGTTGCAGCCT
TCTCATTCACAGCAAAATCTGATCCAAGGCTTTTCAGAAAACCACTTAATATCTCAGGCG
CAGATGCTTCAGCAGCAATTGCAGCGCCGTCAAAATTTTAATGATCAACAGCAATTGCTG
CAGCCACAGCTTCAGCGGCACCAAGAAGTGAACTCGCAGTTTCAACATCAACAGCAAACT
AAGACCATCTCCGGTCTCTCTCAGATGGCTTCAGCCACGCATCCCCATCTTTCTCATTTG
CAAGTCCTAAGTTCAACTGGTTCCCCGCAAACCTTTTCTGATATACTGGGTAACCATGTC
AATGCATCTAGTAATTCTAATATGCAAAGTCTGTTGAGTTCATTTTCCTGTGATGGAGCA
TCTACTGTCCTGAACGTGCATGAAACTCACCCTCTAGTGTCTTCGTCCTCATCATCAAAG
CGAATTGCTCTAGAATCTCAGCTCCCTTCTCGGGTTACTCCATTTGTGGTGTCCCAGCCT
GAGGATGTGATAGCGCACAATACTAAGGTCTCAGATCTTTCCTCTTTGCTGCCACCTTTT
CCTAGCAGAGAATCGTTTTCTGATTATAGAGGAGTAGAAGATAGCCAAAGCAATGCACTC
TATGGATTTACAGACTCTTTGAACATACTGCAGACCGGTATGTCCAACATGAAGGGTAGT
AGTGGTGATAATGGATCTTTATCTATTCCTTATGCTACCTCTACCTTCACAAGTACTGTG
GGCAATGAGTATCCCCTTAACTCAGACATGACAGCTTCAAGTTGTGTAGATGAATCAGGT
TTCTTGCAGTCCTCCGAAAATGGGGACCAAGCAAACCCAACTAATAGAATCTTTGTGAAG
GTTCAAAAATCAGGGTCCTTTGGACGGTCACTCGATATCTCCAAATTTAGCAGCTATCAC
GAACTTCGAAGTGAGCTTGCTCGCATGTTTGGGCTAGAAGGCTTGTTGGAGGACCCTGAG
AGATCAGGCTGGCAGCTTGTAATTGTTGACCGAGAGAATGATGTCCTCCTCCTCGGTGAC
GATCCTTGGCAGGAGTTTGTGAACAATGTTTGGTACATCAAGATACTTTCTCCACATGAA
GTGCAGCAGATGGGGAAAGAGGGACTTGATCTTCCAAATGGCGTCCAAGCGCAGACGCAG
ACGCTTCCTGGCAATGTCAATGGATGTGATGACTATATGAACCAGAAGGGCTCCCGAAAT
ACTATGAACGGGATACCGTTGGGGTCACTTGACTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027884
PEP Infomation

pacid=37433264 transcript=PGSC0003DMT400041127 locus=PGSC0003DMG400015919 ID=PGSC0003DMT400041127.v4.03 annot-version=v4.03
Sequence

MRVSSSGFNPQQEEAGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNK
EVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGI
PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWK
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSS
VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRF
RMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP
LTTFPMYPSPFSLRLKRPWPSGLPSLPGFPNGDMTMNSPLSWLRGDMGDQGMQSLNFQGF
GVTPFMQPRMDASMLGLQPDILQTMAALDPSKLANQSLMQFQHSIPNSSAPLSQSQMLQP
SHSQQNLIQGFSENHLISQAQMLQQQLQRRQNFNDQQQLLQPQLQRHQEVNSQFQHQQQT
KTISGLSQMASATHPHLSHLQVLSSTGSPQTFSDILGNHVNASSNSNMQSLLSSFSCDGA
STVLNVHETHPLVSSSSSSKRIALESQLPSRVTPFVVSQPEDVIAHNTKVSDLSSLLPPF
PSRESFSDYRGVEDSQSNALYGFTDSLNILQTGMSNMKGSSGDNGSLSIPYATSTFTSTV
GNEYPLNSDMTASSCVDESGFLQSSENGDQANPTNRIFVKVQKSGSFGRSLDISKFSSYH
ELRSELARMFGLEGLLEDPERSGWQLVIVDRENDVLLLGDDPWQEFVNNVWYIKILSPHE
VQQMGKEGLDLPNGVQAQTQTLPGNVNGCDDYMNQKGSRNTMNGIPLGSLDY*

Transcript Sequence

Transcript ID

PGSC0003DMT400041127
Transcript Infomation

pacid=37433264 locus=PGSC0003DMG400015919 ID=PGSC0003DMT400041127.v4.03 annot-version=v4.03
Sequence

ATGAGGGTATCATCATCTGGGTTCAATCCTCAGCAAGAGGAAGCAGGGGAGAAGAAATGC
TTGAATTCAGAGCTGTGGCACGCGTGTGCAGGACCACTAGTTTCACTTCCACCTGTAGGA
AGCAGAGTTGTGTATTTTCCTCAAGGGCACAGTGAGCAGGTTGCTGCCTCAACCAACAAG
GAAGTAGATGCTCATATCCCTAATTATCCTGGTTTACCGCCTCAACTAATTTGTCAGCTT
CACAACCTGACAATGCATGCAGATGTTGAAACTGATGAAGTATATGCTCAAATGACATTG
CAGCCACTAAGTCCACAAGAGCAAAAGGATGTGTGCCTGTTACCAGCAGAACTTGGCATC
CCGAGTAAACAACCAACCAACTATTTCTGCAAAACTTTGACGGCAAGTGACACCAGTACT
CATGGTGGATTCTCTGTCCCTCGCCGAGCAGCAGAAAAAGTTTTCCCCCCTCTTGATTAC
TCTCAGCAGCCACCCTGTCAAGAGTTGATTGCAAAAGATCTCCATGGGAATGAATGGAAA
TTCCGGCATATTTTTCGCGGACAACCGAAGAGGCATCTATTGACAACCGGATGGAGTGTG
TTTGTGAGTGCAAAGAGACTTGTTGCAGGCGATGCAGTCATCTTTATCTGGAACGAAAAC
AATCAATTGCTTTTGGGGATTCGACGTGCTAATCGTCCTCAAACTGTCATGCCTTCTTCA
GTCTTGTCAAGTGATAGCATGCACATTGGTCTCCTAGCTGCAGCGGCTCATGCAGCTGCA
ACTAATAGCCGCTTTACAATATTTTATAATCCAAGGGCCAGCCCATCAGAGTTTGTCATA
CCTCTGGCTAAGTATGCTAAAGCAGTGTATCATACTCGAATATCTGTTGGTATGAGGTTC
CGGATGCTGTTTGAAACAGAAGAATCAAGTGTCCGTAGGTACATGGGCACAATTACTGGC
ATCAGTGATTTAGATCCTGTTCGTTGGCCAAATTCACACTGGCGGTCTGTGAAGGTTGGA
TGGGATGAATCAACTGCTGGAGAGAGGCAGCCCAGAGTTTCTCTGTGGGAAATTGAACCT
CTGACAACATTTCCTATGTATCCTTCTCCTTTCTCCCTTAGGCTAAAGCGGCCTTGGCCA
TCTGGACTACCTTCTCTCCCTGGTTTCCCAAATGGTGATATGACTATGAATTCTCCACTC
TCATGGCTGCGTGGTGACATGGGAGATCAAGGGATGCAGTCGCTTAATTTCCAGGGATTT
GGTGTTACTCCGTTTATGCAACCAAGAATGGATGCTTCTATGTTAGGTTTGCAACCTGAC
ATTCTGCAAACAATGGCAGCACTAGATCCATCGAAACTTGCAAATCAATCCCTTATGCAG
TTCCAACATAGTATTCCTAACAGTTCAGCGCCTTTGAGTCAGAGTCAGATGTTGCAGCCT
TCTCATTCACAGCAAAATCTGATCCAAGGCTTTTCAGAAAACCACTTAATATCTCAGGCG
CAGATGCTTCAGCAGCAATTGCAGCGCCGTCAAAATTTTAATGATCAACAGCAATTGCTG
CAGCCACAGCTTCAGCGGCACCAAGAAGTGAACTCGCAGTTTCAACATCAACAGCAAACT
AAGACCATCTCCGGTCTCTCTCAGATGGCTTCAGCCACGCATCCCCATCTTTCTCATTTG
CAAGTCCTAAGTTCAACTGGTTCCCCGCAAACCTTTTCTGATATACTGGGTAACCATGTC
AATGCATCTAGTAATTCTAATATGCAAAGTCTGTTGAGTTCATTTTCCTGTGATGGAGCA
TCTACTGTCCTGAACGTGCATGAAACTCACCCTCTAGTGTCTTCGTCCTCATCATCAAAG
CGAATTGCTCTAGAATCTCAGCTCCCTTCTCGGGTTACTCCATTTGTGGTGTCCCAGCCT
GAGGATGTGATAGCGCACAATACTAAGGTCTCAGATCTTTCCTCTTTGCTGCCACCTTTT
CCTAGCAGAGAATCGTTTTCTGATTATAGAGGAGTAGAAGATAGCCAAAGCAATGCACTC
TATGGATTTACAGACTCTTTGAACATACTGCAGACCGGTATGTCCAACATGAAGGGTAGT
AGTGGTGATAATGGATCTTTATCTATTCCTTATGCTACCTCTACCTTCACAAGTACTGTG
GGCAATGAGTATCCCCTTAACTCAGACATGACAGCTTCAAGTTGTGTAGATGAATCAGGT
TTCTTGCAGTCCTCCGAAAATGGGGACCAAGCAAACCCAACTAATAGAATCTTTGTGAAG
GTTCAAAAATCAGGGTCCTTTGGACGGTCACTCGATATCTCCAAATTTAGCAGCTATCAC
GAACTTCGAAGTGAGCTTGCTCGCATGTTTGGGCTAGAAGGCTTGTTGGAGGACCCTGAG
AGATCAGGCTGGCAGCTTGTAATTGTTGACCGAGAGAATGATGTCCTCCTCCTCGGTGAC
GATCCTTGGCAGGAGTTTGTGAACAATGTTTGGTACATCAAGATACTTTCTCCACATGAA
GTGCAGCAGATGGGGAAAGAGGGACTTGATCTTCCAAATGGCGTCCAAGCGCAGACGCAG
ACGCTTCCTGGCAATGTCAATGGATGTGATGACTATATGAACCAGAAGGGCTCCCGAAAT
ACTATGAACGGGATACCGTTGGGGTCACTTGACTACTAA