Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041092
CDS Infomation

pacid=37442246 polypeptide=PGSC0003DMP400027866 locus=PGSC0003DMG400015904 ID=PGSC0003DMT400041092.v4.03 annot-version=v4.03
Sequence

ATGGAAGATAAATCCATTCCATTCGAATCAAGTCACTCCGTATCAAACAACGATAACAAT
CACGGATGGCAAAAGGTGACATATGTGAAGAAGCAGAAAAAAAAGCAGCAAAAACTCTCG
GATTCAGGCAAGGTAATCGCCAATGGATCTGCTATTTCCGGCGCCGATAATGTGTATAAG
TCGCTTGAGAAGCACTCCGATGAACGCCGCAAGAGAATTGCAGCTCAGACGGCTGCGATG
TACGCTGTTGGCGATGCTCCGGTTAGATCGGCGATGAAACACCGGTCGGACGATGAAGAC
GAGGATAACGATGCTGAAGGTGGTGCTGAAAATGGTGTGGTTGGGGAGAAGAAGACGGAC
AAAGTAAAAAAACCGAAGAAGCCAAAAGTTACTGTGGCTGAAGCTGCTGCGAAGATCGAT
GCAGCTGATCTAGATGCTTTTCTCGCTGATATAACTGTTTCCTATGAATCTCAGCAAGAA
ATACAATTGATGCGTTTTGCGGATTACTTTGGACGGTCATTTGCGGCAGTGGCTGGTTCA
CAATTTCCGTGGTTGAAATTGTTCAGGGAGTCCCCTATCAGTAAAATTGCAGATGTTCCT
GTTTCACATCTTCCTGAACCAGTTTATAAAACATCAGTGGATTGGATCAACCAACGTTCT
TTCGAGGCTCTTGGATCGTTTGTGCTGTGGGGACTAGACAGTATTCTTGTGGACTTAACG
GCCCAACTAGCAGGTTCTAAGGGCTCCAAGAAAGGTGGCCAACAAACATCGTCAAAATCT
CAGGTTGCCATGTTTTTAGTTTTGGCAATGGTACTACGACGAAAGCCTGATGTTTTAATC
ACTATACTCCCGACGCTTCGGGAAAGTCCAAAGTATCAAGGGCAAGACAAACTTACAGTT
ATTCCATGGATGATAGTCCAGGCCTGTCAGGGCGATCTCTGCGTTGGATTGTACTTGTGG
GCACATCATACCTTGCCTTTAGTTGGAGGAAAATCAGGTTCCAATCCGCAGACAAGGGAC
TTGATTTTGCAGGTGGTAGAAAGGATCCTCTCTGCACCAAAAGCTCGTACAATTTTAGTA
AATGGGGCTGTTAGGAAGGGAGAGCGTCTGATGCCGCCTTCATCCCTTGACCTGCTTCTA
CGAGTGACTTTCCCCGCTCCTTCTGCGCGAGTCAAGGCAACTGAAAGGTTTGAGGCAGTA
TATCCCACTCTTAAGGAGGTTGCGCTTGCTGGTTCCCCTGGAAGCAAAGCAATGAAGCAA
GTTTCACAACAGATACTTCTACTAGCTGTAAAGGCCGTTGGAGGAGGCAATCCAGAACTA
TCTCGAGAGGCAGCAAACATATTCAATTGGTGTTTGACCCAGAGTGCTGACTGTTACAAG
CAGTGGGACAAGATTTACCTGGATAACATAGAAGCAAGTGTTGCAGTGTTGAGAAAGCTC
ACCGAGGGGTGGAAGGAGTTATCGAGGAGACAGTCTTCTCCGGAGGCTTTGAAGGAGACT
CTCAAGAGCTTCAGACAGAAGAATGAGAAATCATTAACTGGTGGAGTGGTTGCTCACCAG
TCACACTTGAGAGATGCAGATAAGTACTGTAAAATGTTGTTAGCAAGGCTGTCTCATGGA
CATGGGTGTCTGAAAGGATTTGTTGTTGTTCTTTTGGCTATGGCGGTGGGAGGTGCTATT
GTGTCACAGAACTTGGAGGATTGGGATTGGAACAAGTTTTCAGCTTTGCTTAATGTCCCA
CAGTCGTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027866
PEP Infomation

pacid=37442246 transcript=PGSC0003DMT400041092 locus=PGSC0003DMG400015904 ID=PGSC0003DMT400041092.v4.03 annot-version=v4.03
Sequence

MEDKSIPFESSHSVSNNDNNHGWQKVTYVKKQKKKQQKLSDSGKVIANGSAISGADNVYK
SLEKHSDERRKRIAAQTAAMYAVGDAPVRSAMKHRSDDEDEDNDAEGGAENGVVGEKKTD
KVKKPKKPKVTVAEAAAKIDAADLDAFLADITVSYESQQEIQLMRFADYFGRSFAAVAGS
QFPWLKLFRESPISKIADVPVSHLPEPVYKTSVDWINQRSFEALGSFVLWGLDSILVDLT
AQLAGSKGSKKGGQQTSSKSQVAMFLVLAMVLRRKPDVLITILPTLRESPKYQGQDKLTV
IPWMIVQACQGDLCVGLYLWAHHTLPLVGGKSGSNPQTRDLILQVVERILSAPKARTILV
NGAVRKGERLMPPSSLDLLLRVTFPAPSARVKATERFEAVYPTLKEVALAGSPGSKAMKQ
VSQQILLLAVKAVGGGNPELSREAANIFNWCLTQSADCYKQWDKIYLDNIEASVAVLRKL
TEGWKELSRRQSSPEALKETLKSFRQKNEKSLTGGVVAHQSHLRDADKYCKMLLARLSHG
HGCLKGFVVVLLAMAVGGAIVSQNLEDWDWNKFSALLNVPQSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400041092
Transcript Infomation

pacid=37442246 locus=PGSC0003DMG400015904 ID=PGSC0003DMT400041092.v4.03 annot-version=v4.03
Sequence

ATGGAAGATAAATCCATTCCATTCGAATCAAGTCACTCCGTATCAAACAACGATAACAAT
CACGGATGGCAAAAGGTGACATATGTGAAGAAGCAGAAAAAAAAGCAGCAAAAACTCTCG
GATTCAGGCAAGGTAATCGCCAATGGATCTGCTATTTCCGGCGCCGATAATGTGTATAAG
TCGCTTGAGAAGCACTCCGATGAACGCCGCAAGAGAATTGCAGCTCAGACGGCTGCGATG
TACGCTGTTGGCGATGCTCCGGTTAGATCGGCGATGAAACACCGGTCGGACGATGAAGAC
GAGGATAACGATGCTGAAGGTGGTGCTGAAAATGGTGTGGTTGGGGAGAAGAAGACGGAC
AAAGTAAAAAAACCGAAGAAGCCAAAAGTTACTGTGGCTGAAGCTGCTGCGAAGATCGAT
GCAGCTGATCTAGATGCTTTTCTCGCTGATATAACTGTTTCCTATGAATCTCAGCAAGAA
ATACAATTGATGCGTTTTGCGGATTACTTTGGACGGTCATTTGCGGCAGTGGCTGGTTCA
CAATTTCCGTGGTTGAAATTGTTCAGGGAGTCCCCTATCAGTAAAATTGCAGATGTTCCT
GTTTCACATCTTCCTGAACCAGTTTATAAAACATCAGTGGATTGGATCAACCAACGTTCT
TTCGAGGCTCTTGGATCGTTTGTGCTGTGGGGACTAGACAGTATTCTTGTGGACTTAACG
GCCCAACTAGCAGGTTCTAAGGGCTCCAAGAAAGGTGGCCAACAAACATCGTCAAAATCT
CAGGTTGCCATGTTTTTAGTTTTGGCAATGGTACTACGACGAAAGCCTGATGTTTTAATC
ACTATACTCCCGACGCTTCGGGAAAGTCCAAAGTATCAAGGGCAAGACAAACTTACAGTT
ATTCCATGGATGATAGTCCAGGCCTGTCAGGGCGATCTCTGCGTTGGATTGTACTTGTGG
GCACATCATACCTTGCCTTTAGTTGGAGGAAAATCAGGTTCCAATCCGCAGACAAGGGAC
TTGATTTTGCAGGTGGTAGAAAGGATCCTCTCTGCACCAAAAGCTCGTACAATTTTAGTA
AATGGGGCTGTTAGGAAGGGAGAGCGTCTGATGCCGCCTTCATCCCTTGACCTGCTTCTA
CGAGTGACTTTCCCCGCTCCTTCTGCGCGAGTCAAGGCAACTGAAAGGTTTGAGGCAGTA
TATCCCACTCTTAAGGAGGTTGCGCTTGCTGGTTCCCCTGGAAGCAAAGCAATGAAGCAA
GTTTCACAACAGATACTTCTACTAGCTGTAAAGGCCGTTGGAGGAGGCAATCCAGAACTA
TCTCGAGAGGCAGCAAACATATTCAATTGGTGTTTGACCCAGAGTGCTGACTGTTACAAG
CAGTGGGACAAGATTTACCTGGATAACATAGAAGCAAGTGTTGCAGTGTTGAGAAAGCTC
ACCGAGGGGTGGAAGGAGTTATCGAGGAGACAGTCTTCTCCGGAGGCTTTGAAGGAGACT
CTCAAGAGCTTCAGACAGAAGAATGAGAAATCATTAACTGGTGGAGTGGTTGCTCACCAG
TCACACTTGAGAGATGCAGATAAGTACTGTAAAATGTTGTTAGCAAGGCTGTCTCATGGA
CATGGGTGTCTGAAAGGATTTGTTGTTGTTCTTTTGGCTATGGCGGTGGGAGGTGCTATT
GTGTCACAGAACTTGGAGGATTGGGATTGGAACAAGTTTTCAGCTTTGCTTAATGTCCCA
CAGTCGTCCTAA