Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400041043
CDS Infomation

pacid=37471517 polypeptide=PGSC0003DMP400027828 locus=PGSC0003DMG401015877 ID=PGSC0003DMT400041043.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTATACTGCTGTAATTTCTCTTCTTCAAACTGTTGATCAACCAAATATTGCA
GAACTCTTTCATGATCACAGTGCTGAAATGCTCGATTCTCTTCGTGCTACAGCTGAATAT
TTTCAAGATGTTCTTGAAAACACTAGCGATGAGAAAATCAAATCTTTGGAGGAAGATATT
AGAGTTGTTGTTAGTGAGGCAGAGGATGTTGTTGAAATGAAGATTTCTGAAATCATCAAA
GAAGAAAGCTGGACATTTGGAATTTTACAACACCAGGATATGCTACCAGTTGTTGAAAAA
ATGGATACGACAAAGAAGCAAGTGATGGAGATTCTTTCTCATGATGCTGATCAAATTCTT
GAATTAACCGCGGATTCCTTGATTGACGCTTCTTCTATGAGTGATCCAATGCTGTCAGAT
CACTTGAAAGATGATATTGTGCAGGGACTTGATGGTGACTTGGAGAAAATAGATAAGAGA
TTGAGAGGACCAACGTCGTATCTAGACATTGTCACCATATCAGGTATGGGTGGCATTGGC
AAAACAACACTCGCTAAAAAAGCTTATGATCATCTTCCAATCAGGTGTCACTTTGACATT
TTTGTTTGGGTTACAATATCTCAAGAATTTCGATATAGAAATGTATTGTTAGAAGCTTTA
CATTGCATTTCAAAGCAAAGAGTTAATGTGAACACAAAAGATTATGTTAAGATGAATGCT
AGTGAGTTAGCTGATCTGGTGCAAAAGAGTCTAAAGGGTCCAAGATACCTTGTTGTCGTT
GATGATATTTGGAGTAGGGATGTTTGGGATAGCATATCACAAATATTTCCTAATCGCAAC
AATGGGAGTCGAGTCTTATTGACTACTAGGGAAACTGATGTAGCAATATATGCAACTACT
AGTAGCCCTCATAAGATGGACCTCTTGAATTTAGATAACAGTTGGAAGTTACTTCGTGTT
AAGGTGTTTGGACTAGAACACGATCATCCTGCTGAGTTGGAAGAAATTGGAAAAACAATA
GCAGGAAAATGCCAAGGACTTCCCTTAATAATTTCAGTGATTGCAGGGCCTCTCTCTAAA
ACGGTGCCCAAGACATTAGAAAGTTGGAAGTATGTTGCCAAAACATTAAGTGAAATCATT
GCTAGTCATCCAAATAAATGCTTAGGAGTGCTCGGTTTGAGTTACCATCAGTTGCCTAAT
CGACTCAAACCGTGCTTTCTTTCTATGGGTGATTTCCCAGAGGATTTTCAAGTTGATACT
CGGAGATTGTTCCAATTATGGATCGCAGAAGGCTTCATAAGGGCGTCTGCTGGAAGTCGT
GAAAGTTTGGAGGAAGTGGCTGAACATTATTTGGAGGATCTTATCAACAGGAACTTGATA
ATGGCTAGAAAAAAGAGATTCAATGGTGAGGTAAAAGCATGCGGAATACATGATCTGCTG
CGTGAGTTCTGTTTGATAGAAGCTGAAATGACAAAGTTTATGCATGTTGTGAGAACTCCA
TTTTCACCAGCACAAAAGCCTAATTTTCGTCGCTTCAGTATTCAAAAGCGTATTGAGGAT
GCTTATAAGCTCTTACCCCCTGTAGCCAGATCTATCTACTGCTTTACTTACTTGGATCTA
CCTTATGAACCCCGTATTAAGATTCTCCCTAGATTGCCCATCTACCGTCATGATCCTATA
ATACATGGATTTTTCTCTTGTTTCAACCATCTCAGGGTATTGGCCATCTTTCCTTCCTCG
TTCAGCACATTTCCACTTGTGATTATGAAGTTATTTCATTTGAGATATCTCCAATTTCGA
TGTTTTGACAACAATATTCCTGAATCAATCTCAGAGCTTCTGAATTTGCAAACTCTAATT
TGTGAGGGTTTTCCTTTAGAGATAACTTTACCTAGGAAGATATGGATGTTGAAGAACTTG
AGGTATATACGTATAGGGGGAGCCACTTATTTACCAAGTCCTAGAATAGATAAGAATCTT
GTGACAGGGATGCCAAGTCTTGAGGAACTTTACGGTATTTGTTACTCTAGTTGTACAAAT
GAAGTCATTTCTAGCACTCCCAATCTAAAGAGATTGATCATTCGTGTACATTGGAGCATA
CTAAAGAATTTTCCGGATCGTCCCTTGGATATGTCCAGCTTGACAAAAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027828
PEP Infomation

pacid=37471517 transcript=PGSC0003DMT400041043 locus=PGSC0003DMG401015877 ID=PGSC0003DMT400041043.v4.03 annot-version=v4.03
Sequence

MAAYTAVISLLQTVDQPNIAELFHDHSAEMLDSLRATAEYFQDVLENTSDEKIKSLEEDI
RVVVSEAEDVVEMKISEIIKEESWTFGILQHQDMLPVVEKMDTTKKQVMEILSHDADQIL
ELTADSLIDASSMSDPMLSDHLKDDIVQGLDGDLEKIDKRLRGPTSYLDIVTISGMGGIG
KTTLAKKAYDHLPIRCHFDIFVWVTISQEFRYRNVLLEALHCISKQRVNVNTKDYVKMNA
SELADLVQKSLKGPRYLVVVDDIWSRDVWDSISQIFPNRNNGSRVLLTTRETDVAIYATT
SSPHKMDLLNLDNSWKLLRVKVFGLEHDHPAELEEIGKTIAGKCQGLPLIISVIAGPLSK
TVPKTLESWKYVAKTLSEIIASHPNKCLGVLGLSYHQLPNRLKPCFLSMGDFPEDFQVDT
RRLFQLWIAEGFIRASAGSRESLEEVAEHYLEDLINRNLIMARKKRFNGEVKACGIHDLL
REFCLIEAEMTKFMHVVRTPFSPAQKPNFRRFSIQKRIEDAYKLLPPVARSIYCFTYLDL
PYEPRIKILPRLPIYRHDPIIHGFFSCFNHLRVLAIFPSSFSTFPLVIMKLFHLRYLQFR
CFDNNIPESISELLNLQTLICEGFPLEITLPRKIWMLKNLRYIRIGGATYLPSPRIDKNL
VTGMPSLEELYGICYSSCTNEVISSTPNLKRLIIRVHWSILKNFPDRPLDMSSLTKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400041043
Transcript Infomation

pacid=37471517 locus=PGSC0003DMG401015877 ID=PGSC0003DMT400041043.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTATACTGCTGTAATTTCTCTTCTTCAAACTGTTGATCAACCAAATATTGCA
GAACTCTTTCATGATCACAGTGCTGAAATGCTCGATTCTCTTCGTGCTACAGCTGAATAT
TTTCAAGATGTTCTTGAAAACACTAGCGATGAGAAAATCAAATCTTTGGAGGAAGATATT
AGAGTTGTTGTTAGTGAGGCAGAGGATGTTGTTGAAATGAAGATTTCTGAAATCATCAAA
GAAGAAAGCTGGACATTTGGAATTTTACAACACCAGGATATGCTACCAGTTGTTGAAAAA
ATGGATACGACAAAGAAGCAAGTGATGGAGATTCTTTCTCATGATGCTGATCAAATTCTT
GAATTAACCGCGGATTCCTTGATTGACGCTTCTTCTATGAGTGATCCAATGCTGTCAGAT
CACTTGAAAGATGATATTGTGCAGGGACTTGATGGTGACTTGGAGAAAATAGATAAGAGA
TTGAGAGGACCAACGTCGTATCTAGACATTGTCACCATATCAGGTATGGGTGGCATTGGC
AAAACAACACTCGCTAAAAAAGCTTATGATCATCTTCCAATCAGGTGTCACTTTGACATT
TTTGTTTGGGTTACAATATCTCAAGAATTTCGATATAGAAATGTATTGTTAGAAGCTTTA
CATTGCATTTCAAAGCAAAGAGTTAATGTGAACACAAAAGATTATGTTAAGATGAATGCT
AGTGAGTTAGCTGATCTGGTGCAAAAGAGTCTAAAGGGTCCAAGATACCTTGTTGTCGTT
GATGATATTTGGAGTAGGGATGTTTGGGATAGCATATCACAAATATTTCCTAATCGCAAC
AATGGGAGTCGAGTCTTATTGACTACTAGGGAAACTGATGTAGCAATATATGCAACTACT
AGTAGCCCTCATAAGATGGACCTCTTGAATTTAGATAACAGTTGGAAGTTACTTCGTGTT
AAGGTGTTTGGACTAGAACACGATCATCCTGCTGAGTTGGAAGAAATTGGAAAAACAATA
GCAGGAAAATGCCAAGGACTTCCCTTAATAATTTCAGTGATTGCAGGGCCTCTCTCTAAA
ACGGTGCCCAAGACATTAGAAAGTTGGAAGTATGTTGCCAAAACATTAAGTGAAATCATT
GCTAGTCATCCAAATAAATGCTTAGGAGTGCTCGGTTTGAGTTACCATCAGTTGCCTAAT
CGACTCAAACCGTGCTTTCTTTCTATGGGTGATTTCCCAGAGGATTTTCAAGTTGATACT
CGGAGATTGTTCCAATTATGGATCGCAGAAGGCTTCATAAGGGCGTCTGCTGGAAGTCGT
GAAAGTTTGGAGGAAGTGGCTGAACATTATTTGGAGGATCTTATCAACAGGAACTTGATA
ATGGCTAGAAAAAAGAGATTCAATGGTGAGGTAAAAGCATGCGGAATACATGATCTGCTG
CGTGAGTTCTGTTTGATAGAAGCTGAAATGACAAAGTTTATGCATGTTGTGAGAACTCCA
TTTTCACCAGCACAAAAGCCTAATTTTCGTCGCTTCAGTATTCAAAAGCGTATTGAGGAT
GCTTATAAGCTCTTACCCCCTGTAGCCAGATCTATCTACTGCTTTACTTACTTGGATCTA
CCTTATGAACCCCGTATTAAGATTCTCCCTAGATTGCCCATCTACCGTCATGATCCTATA
ATACATGGATTTTTCTCTTGTTTCAACCATCTCAGGGTATTGGCCATCTTTCCTTCCTCG
TTCAGCACATTTCCACTTGTGATTATGAAGTTATTTCATTTGAGATATCTCCAATTTCGA
TGTTTTGACAACAATATTCCTGAATCAATCTCAGAGCTTCTGAATTTGCAAACTCTAATT
TGTGAGGGTTTTCCTTTAGAGATAACTTTACCTAGGAAGATATGGATGTTGAAGAACTTG
AGGTATATACGTATAGGGGGAGCCACTTATTTACCAAGTCCTAGAATAGATAAGAATCTT
GTGACAGGGATGCCAAGTCTTGAGGAACTTTACGGTATTTGTTACTCTAGTTGTACAAAT
GAAGTCATTTCTAGCACTCCCAATCTAAAGAGATTGATCATTCGTGTACATTGGAGCATA
CTAAAGAATTTTCCGGATCGTCCCTTGGATATGTCCAGCTTGACAAAAACTTGA