Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040999
CDS Infomation

pacid=37438103 polypeptide=PGSC0003DMP400027800 locus=PGSC0003DMG400015860 ID=PGSC0003DMT400040999.v4.03 annot-version=v4.03
Sequence

ATGGCAGATAGTAAAGAAGCAGCACAAGTTATGTCAATTACCATATACCCACTCAAATCA
TGCCGTGGTATTTCAGTTCCTGAAGCAGCCCTTTCTTCTACTGGATTTCGATGGGATCGG
CAGTGGATCGTTGTGAACTCCAAAGGTAGAGCATGTACTCAAAGAGTAGAGCCATCGCTT
GCTCTGATTGAGGTTGAACTGCCAAATGAGGCATTTTCAGAGGGCTGGGAACCAAATCCA
AGCTCATTTTTAGTGATAAGAGCTCCTGGTATGGATGTGCTTAAAGTCCCACTGGCTGAA
CCATCTGAAGTAGCAAACGGTGTCTCAGTGTGGGAATGGTCTGGCTCTGCTTTGGATGAA
GGAGATGAAGCATCAAAGTGGTTCTCCAAATATCTAGGGAAACCTAGTCGTCTCGTACGT
TTCAATGAAGTATCACAGTCTAGACCTACCGACCCTAACTATGCTCCTGGGTACAAAATA
AAATTTAATGATGCATACCCCTTCCTCCTTATATCCCAGAAATCACTGGATGTATTAAAC
GAGCAACTCAAGGAGCCTGTGTCAATCAACCGCTTCAGACCAAATATCCTCATTGACGGA
TCCAATCCATTTTGTGAAGATTTATGGAAGGATGTCAAAATAGGTGAAAATACATTCCAT
AGCACAGAGTTATGCTATCGCTGCAAGGTACCAACAATTAATCAAGAAACTGCAGAAGCA
GGTTCCGAGCCAAGTGAAACGCTCATGAAGTTCCGTTCAGATAAAGTCCTAAAGACAAAT
AAGAAACCGCAAGGACGAATTTACTTTGGTCAGATGTTAGTGTGGGAGGATTATGTTGCA
CAAGAGAAGAGAAAGACCATCAAAGTGGGTGATCCTGTCTATGTCCTCAAGATGGTTTCG
TCCTATGATGATGTATCTGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027800
PEP Infomation

pacid=37438103 transcript=PGSC0003DMT400040999 locus=PGSC0003DMG400015860 ID=PGSC0003DMT400040999.v4.03 annot-version=v4.03
Sequence

MADSKEAAQVMSITIYPLKSCRGISVPEAALSSTGFRWDRQWIVVNSKGRACTQRVEPSL
ALIEVELPNEAFSEGWEPNPSSFLVIRAPGMDVLKVPLAEPSEVANGVSVWEWSGSALDE
GDEASKWFSKYLGKPSRLVRFNEVSQSRPTDPNYAPGYKIKFNDAYPFLLISQKSLDVLN
EQLKEPVSINRFRPNILIDGSNPFCEDLWKDVKIGENTFHSTELCYRCKVPTINQETAEA
GSEPSETLMKFRSDKVLKTNKKPQGRIYFGQMLVWEDYVAQEKRKTIKVGDPVYVLKMVS
SYDDVSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400040999
Transcript Infomation

pacid=37438103 locus=PGSC0003DMG400015860 ID=PGSC0003DMT400040999.v4.03 annot-version=v4.03
Sequence

ATGGCAGATAGTAAAGAAGCAGCACAAGTTATGTCAATTACCATATACCCACTCAAATCA
TGCCGTGGTATTTCAGTTCCTGAAGCAGCCCTTTCTTCTACTGGATTTCGATGGGATCGG
CAGTGGATCGTTGTGAACTCCAAAGGTAGAGCATGTACTCAAAGAGTAGAGCCATCGCTT
GCTCTGATTGAGGTTGAACTGCCAAATGAGGCATTTTCAGAGGGCTGGGAACCAAATCCA
AGCTCATTTTTAGTGATAAGAGCTCCTGGTATGGATGTGCTTAAAGTCCCACTGGCTGAA
CCATCTGAAGTAGCAAACGGTGTCTCAGTGTGGGAATGGTCTGGCTCTGCTTTGGATGAA
GGAGATGAAGCATCAAAGTGGTTCTCCAAATATCTAGGGAAACCTAGTCGTCTCGTACGT
TTCAATGAAGTATCACAGTCTAGACCTACCGACCCTAACTATGCTCCTGGGTACAAAATA
AAATTTAATGATGCATACCCCTTCCTCCTTATATCCCAGAAATCACTGGATGTATTAAAC
GAGCAACTCAAGGAGCCTGTGTCAATCAACCGCTTCAGACCAAATATCCTCATTGACGGA
TCCAATCCATTTTGTGAAGATTTATGGAAGGATGTCAAAATAGGTGAAAATACATTCCAT
AGCACAGAGTTATGCTATCGCTGCAAGGTACCAACAATTAATCAAGAAACTGCAGAAGCA
GGTTCCGAGCCAAGTGAAACGCTCATGAAGTTCCGTTCAGATAAAGTCCTAAAGACAAAT
AAGAAACCGCAAGGACGAATTTACTTTGGTCAGATGTTAGTGTGGGAGGATTATGTTGCA
CAAGAGAAGAGAAAGACCATCAAAGTGGGTGATCCTGTCTATGTCCTCAAGATGGTTTCG
TCCTATGATGATGTATCTGTGTGA