Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040972
CDS Infomation

pacid=37469560 polypeptide=PGSC0003DMP400027780 locus=PGSC0003DMG400015851 ID=PGSC0003DMT400040972.v4.03 annot-version=v4.03
Sequence

ATGTCCATAGTTGCAGAGGCACCAGGTTACATCCAAGTTTTTTCTGATGGCTCAGTGAAG
CGATTCGAGCCAGAAATAGCTACTGCATCAATTGAACCTTCCAATGGCTACATGTCTAAG
GATGTCGTCATTGATTCTTCGAAACCTATATTAGGTAGAATGTACCTTCCTGAATCAAGT
GTTCACCAGCACTTTCCTGTTCTTGTCTACTTCCATGGTGGTGGATTTTGTATCGGCTCA
ACTACATGGCTCGGTTACCATGTTTTTCTTGGAGATTTAAGTGTGTCTTCAAAATCTATC
ATCCTTTCAGTAGACTATCGTCTTGCACCGGAAAATAGACTTCCTATAGCTTATGAAGAT
TGCTATTCTGCATTGGAATGGCTGATCAAGAACATAGAATTTGAACCATGGCTGAAAAGG
GCTGATCTTTCTCAGCTTTTTCTCTCCGGGGACAGTGCTGGAGGTAACATAGTTCATCAG
GTTGCTATCCAGGCGATTACAAGTGAAGTTTTCCGTGGTAGACTAAAGGGGTTGCTGCCA
ATTCATCCCTATTTTGGGAGTGAAAAGAGGACTGAATTAGAGATGGATAATGGATCAGCA
GGGGGCGTGGAAATGAACGACATGTTTTGGAGACTGAGCTTGCCTCAAGGATCAAATCGT
GATTATTTTGGATGTAATTTTGAGAATGCTCAACTATCTGTGGCTGAATGGTCTCAGTTT
CCAGCAGTGATTGTTTTTGTTGCTGGTTTGGACTTGTTGAAAGAAAGGGGAGTCACGTAC
GCTGAATTCTTAAAGAAGAAGAAAGGTGTGAAAAGTCATGTGAAGGTGGTTGAAGCTGAG
GAACAGGTTCATGTTTATCATGTATTTCATCCTGAATCAGAGGCTACTCGTTTGCTTCAG
AACCAAATGAGTGATTTCATAAATAGTTTTAGGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027780
PEP Infomation

pacid=37469560 transcript=PGSC0003DMT400040972 locus=PGSC0003DMG400015851 ID=PGSC0003DMT400040972.v4.03 annot-version=v4.03
Sequence

MSIVAEAPGYIQVFSDGSVKRFEPEIATASIEPSNGYMSKDVVIDSSKPILGRMYLPESS
VHQHFPVLVYFHGGGFCIGSTTWLGYHVFLGDLSVSSKSIILSVDYRLAPENRLPIAYED
CYSALEWLIKNIEFEPWLKRADLSQLFLSGDSAGGNIVHQVAIQAITSEVFRGRLKGLLP
IHPYFGSEKRTELEMDNGSAGGVEMNDMFWRLSLPQGSNRDYFGCNFENAQLSVAEWSQF
PAVIVFVAGLDLLKERGVTYAEFLKKKKGVKSHVKVVEAEEQVHVYHVFHPESEATRLLQ
NQMSDFINSFRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400040972
Transcript Infomation

pacid=37469560 locus=PGSC0003DMG400015851 ID=PGSC0003DMT400040972.v4.03 annot-version=v4.03
Sequence

ATGTCCATAGTTGCAGAGGCACCAGGTTACATCCAAGTTTTTTCTGATGGCTCAGTGAAG
CGATTCGAGCCAGAAATAGCTACTGCATCAATTGAACCTTCCAATGGCTACATGTCTAAG
GATGTCGTCATTGATTCTTCGAAACCTATATTAGGTAGAATGTACCTTCCTGAATCAAGT
GTTCACCAGCACTTTCCTGTTCTTGTCTACTTCCATGGTGGTGGATTTTGTATCGGCTCA
ACTACATGGCTCGGTTACCATGTTTTTCTTGGAGATTTAAGTGTGTCTTCAAAATCTATC
ATCCTTTCAGTAGACTATCGTCTTGCACCGGAAAATAGACTTCCTATAGCTTATGAAGAT
TGCTATTCTGCATTGGAATGGCTGATCAAGAACATAGAATTTGAACCATGGCTGAAAAGG
GCTGATCTTTCTCAGCTTTTTCTCTCCGGGGACAGTGCTGGAGGTAACATAGTTCATCAG
GTTGCTATCCAGGCGATTACAAGTGAAGTTTTCCGTGGTAGACTAAAGGGGTTGCTGCCA
ATTCATCCCTATTTTGGGAGTGAAAAGAGGACTGAATTAGAGATGGATAATGGATCAGCA
GGGGGCGTGGAAATGAACGACATGTTTTGGAGACTGAGCTTGCCTCAAGGATCAAATCGT
GATTATTTTGGATGTAATTTTGAGAATGCTCAACTATCTGTGGCTGAATGGTCTCAGTTT
CCAGCAGTGATTGTTTTTGTTGCTGGTTTGGACTTGTTGAAAGAAAGGGGAGTCACGTAC
GCTGAATTCTTAAAGAAGAAGAAAGGTGTGAAAAGTCATGTGAAGGTGGTTGAAGCTGAG
GAACAGGTTCATGTTTATCATGTATTTCATCCTGAATCAGAGGCTACTCGTTTGCTTCAG
AACCAAATGAGTGATTTCATAAATAGTTTTAGGAAATGA