Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040971
CDS Infomation

pacid=37468398 polypeptide=PGSC0003DMP400027779 locus=PGSC0003DMG400015850 ID=PGSC0003DMT400040971.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTTGGAAAATATTGAAGAGTCACATAGAGGAAACATTGCCTGAATGGCAAGAC
AAATTCTTGTGTTACAAAGATCTGAAGAAAGAATTGAAATTGATTTATCCTCAGGATGCT
AGACCTATGAAAAGGCAGAGGTTGAATAATGATGAGGTTACCAAGGAGGTGAATGATTTT
GTGAAGCTGTTAGAAGAGGAGATTGATAAGTTTAACAGTTTCTTTGTCGAGAAAGAAGAG
GACTACATCATTCACCTTAAGGTATTGAAAGAAAGGGTAGCTGAGATGAGAAAGTCAAAT
GTAGAGGTGAATAGATTAGGTAGGGACATTGTCGATCTTCATGGAGAAATGGTTTTATTG
GAGAATTACAGTGCTCTTAACTATACAGGAGTTGTGAAGATTTTAAAGAAATATGACAAA
CTCAGTGGGGAGCTTCTTCGATTGCCTTTTATCCAAAAGGTGCTCGCAGAGCCATTCTTC
GAAACTGAGGTTCTAAATAAACTAGTGAAGGAGTGTGATACACTTCTTAGCCTTTTATAC
CAAACTGAGCCACTCAAAGTAGCAGGAGCAGGGGGAGGAGGTAGTGGCGGAGAAAGGCCA
GTCAAAGTTCCTCAAGACCTTGCAGAGATAAAGAATATGGAGAACATGTACTTGAGACTT
ACCTATTCAGCACTCAGAGTCTTGCAGGAGATGCGTAGCAGAAGTTCAACTGTCAGCATG
TTCTCTTTGCCACCAATGAACACCAACGCGCTCGACAATGTATGGAAAAATGCTCCAGTG
GTCATACAAGAAGCAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027779
PEP Infomation

pacid=37468398 transcript=PGSC0003DMT400040971 locus=PGSC0003DMG400015850 ID=PGSC0003DMT400040971.v4.03 annot-version=v4.03
Sequence

MKFWKILKSHIEETLPEWQDKFLCYKDLKKELKLIYPQDARPMKRQRLNNDEVTKEVNDF
VKLLEEEIDKFNSFFVEKEEDYIIHLKVLKERVAEMRKSNVEVNRLGRDIVDLHGEMVLL
ENYSALNYTGVVKILKKYDKLSGELLRLPFIQKVLAEPFFETEVLNKLVKECDTLLSLLY
QTEPLKVAGAGGGGSGGERPVKVPQDLAEIKNMENMYLRLTYSALRVLQEMRSRSSTVSM
FSLPPMNTNALDNVWKNAPVVIQEAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400040971
Transcript Infomation

pacid=37468398 locus=PGSC0003DMG400015850 ID=PGSC0003DMT400040971.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTTGGAAAATATTGAAGAGTCACATAGAGGAAACATTGCCTGAATGGCAAGAC
AAATTCTTGTGTTACAAAGATCTGAAGAAAGAATTGAAATTGATTTATCCTCAGGATGCT
AGACCTATGAAAAGGCAGAGGTTGAATAATGATGAGGTTACCAAGGAGGTGAATGATTTT
GTGAAGCTGTTAGAAGAGGAGATTGATAAGTTTAACAGTTTCTTTGTCGAGAAAGAAGAG
GACTACATCATTCACCTTAAGGTATTGAAAGAAAGGGTAGCTGAGATGAGAAAGTCAAAT
GTAGAGGTGAATAGATTAGGTAGGGACATTGTCGATCTTCATGGAGAAATGGTTTTATTG
GAGAATTACAGTGCTCTTAACTATACAGGAGTTGTGAAGATTTTAAAGAAATATGACAAA
CTCAGTGGGGAGCTTCTTCGATTGCCTTTTATCCAAAAGGTGCTCGCAGAGCCATTCTTC
GAAACTGAGGTTCTAAATAAACTAGTGAAGGAGTGTGATACACTTCTTAGCCTTTTATAC
CAAACTGAGCCACTCAAAGTAGCAGGAGCAGGGGGAGGAGGTAGTGGCGGAGAAAGGCCA
GTCAAAGTTCCTCAAGACCTTGCAGAGATAAAGAATATGGAGAACATGTACTTGAGACTT
ACCTATTCAGCACTCAGAGTCTTGCAGGAGATGCGTAGCAGAAGTTCAACTGTCAGCATG
TTCTCTTTGCCACCAATGAACACCAACGCGCTCGACAATGTATGGAAAAATGCTCCAGTG
GTCATACAAGAAGCAAAGTAG