Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040940
CDS Infomation

pacid=37445837 polypeptide=PGSC0003DMP400027762 locus=PGSC0003DMG400015835 ID=PGSC0003DMT400040940.v4.03 annot-version=v4.03
Sequence

ATGGTTATGTTATTGCTCCTCCTAATCTTAGTCCCCTGCACCATTCCATCATGTTACAGT
TATTTGTTTGAAGGCGAGAGTGTTAACTGTGAAGGTGCTTACAATTGTGGAAACATACGT
GGTGTTAACTACCCGTTCTGGGGAGGTGGTTCACGATCAAGATTATGTGGTAACGACAAT
TTATATCTACAGTGCGAAGATAATCAGACCACTTTGTCTGTTCTTTATTTCATTAGAAAT
ACTATTGGGTATAAACCTTCAGAATTTCATGTACTGATGATTAATCAATCCTCATTCCGT
ATGAAGATTGTTCATCATAATCATTGGAAGAATGTTTGTCCGGAATCTTCTTCACTCTAC
AGTCTTTACAAGTACAACACCACCTTAATCAATGGTCTCAGGTATGTACCAGGAACTACA
TTTATAAACATACACTATGGCTGCAGTCCTGAGGTCCTGTCGACTGTACAGGTGCAGAGC
AATTTTAGTTGTTTTATAATTGGAACAATCAACACTGGTGTGTTCTTTACCGATGAAATT
GTAACAAATGTTCTAGGATGTTCCTTCAGCATACTGGTTCCTCTTGTTTCTACTGCTTAC
AATAAACTGTGGGACGCAACTATAACGCTGCAAGAAGCTGTGAATGAGGGGTTTGAAGTG
GATTACAGTGATGCCTTAGGTGGCTGTTTGGCATGTCAGGATTCAGGAGGAATATGTGAA
GTTAGTCTTGAGTTTCGGTGTCGTTGTGGAGACACAACTCATCCTTCTACCTGTCCAGAT
AATGCTAAGCTACCGGCATATTTGGTGGCGCAGCCAAACACTGATTTTGCAAGAAAGATT
CATTCACTCAAGTTGACAATAGGATTGTCAGTTGCTGGAATTGGCATATTAATCTGCTTT
GGAATCTGGTATACACAGTATAGAAAATCATTCAACAAGTGCATAGGATTCATTAACGGA
AAAACAGAAGATCAGAGTCTAGAGGCATTACTAAAGCAATATGGATCTCTGGCACCAAGG
AGATATAGCTATTGGGAAATCAAGAAAATGACGAATAGATTCAAAGATAAGCTTGGTGAA
GGAGGTTTTGGAGGGGTCTACAAAGGTGAACTTTCTGATGGCCGTGCAGTTGCAGTGAAG
ATTTTAAAAGCATCTAAGGGTGATGAAGAAGAATTTATCAATGAAGTTGCAAGCATCAGC
CAAACTTCACATGTCAATGTCGTGTCTCTTTTAGGATATTGTCTTGATGGGAGCAAAAGA
GCTCTAATTTATGACTTCATGCCAAATGGATCCTTAGAGAAATACATATACGGTGATGGT
TCTCTCTTGGGACTGAACAAATTGTATCAAATTGCAGTTGGAATTGCTAAAGGATTGGAG
TATCTTCACCGTGGATGCAATACAAGAATTTTGCATTTTGACATAAAGCCTCATAACATA
CTCCTTGATGAAGAGTTCTGTCCTAAGATATCAGATTTTGGTTTGGCAAAACTATGCACC
AGGAAAGAAAGCATTGTTTCCATGTTAGGAGCACGAGGGACGATTGGTTATATTGCTCCC
GAAGTAATCAGTAGGAGTTTTGGAGGAGTGTCACACAAATCTGATGTCTATAGTTATGGA
ATGATGGTTCTAGAAATGGTTGGAGGAAGAAAGAATGTCAAGGAAGAAGTGAGCCATACA
AGTGAGATATATTTTCCTTACTGGGCATATCAGCATGTTCAGCTAGACGATGACCTGAAG
CTACATGGGATTATAGACATAGAAGAAGAAGAAACTGCTAGAAAGATGATATTAGTAGGT
CTGTGGTGCATCCAAACTGATCCAGCACAAAGACCATCAATGAGTAAGGTTATTGACATG
CTAGAGGGAAGCCTCGTCTTAGAAATCCCACCAAAACCTTTATTATGTACTCCTTATTGT
TCAGGAAGACATTCTTTGAACACACAGGCAATGCCACTGAACGCCTCCGTAATTTCTTCA
TCCAGTTCATCACTTTGTTCTACTGAAGAATCAGCAAATTTCATAGGCACAGCTACCAAA
GACGGAACTTTCCAGAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027762
PEP Infomation

pacid=37445837 transcript=PGSC0003DMT400040940 locus=PGSC0003DMG400015835 ID=PGSC0003DMT400040940.v4.03 annot-version=v4.03
Sequence

MVMLLLLLILVPCTIPSCYSYLFEGESVNCEGAYNCGNIRGVNYPFWGGGSRSRLCGNDN
LYLQCEDNQTTLSVLYFIRNTIGYKPSEFHVLMINQSSFRMKIVHHNHWKNVCPESSSLY
SLYKYNTTLINGLRYVPGTTFINIHYGCSPEVLSTVQVQSNFSCFIIGTINTGVFFTDEI
VTNVLGCSFSILVPLVSTAYNKLWDATITLQEAVNEGFEVDYSDALGGCLACQDSGGICE
VSLEFRCRCGDTTHPSTCPDNAKLPAYLVAQPNTDFARKIHSLKLTIGLSVAGIGILICF
GIWYTQYRKSFNKCIGFINGKTEDQSLEALLKQYGSLAPRRYSYWEIKKMTNRFKDKLGE
GGFGGVYKGELSDGRAVAVKILKASKGDEEEFINEVASISQTSHVNVVSLLGYCLDGSKR
ALIYDFMPNGSLEKYIYGDGSLLGLNKLYQIAVGIAKGLEYLHRGCNTRILHFDIKPHNI
LLDEEFCPKISDFGLAKLCTRKESIVSMLGARGTIGYIAPEVISRSFGGVSHKSDVYSYG
MMVLEMVGGRKNVKEEVSHTSEIYFPYWAYQHVQLDDDLKLHGIIDIEEEETARKMILVG
LWCIQTDPAQRPSMSKVIDMLEGSLVLEIPPKPLLCTPYCSGRHSLNTQAMPLNASVISS
SSSSLCSTEESANFIGTATKDGTFQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400040940
Transcript Infomation

pacid=37445837 locus=PGSC0003DMG400015835 ID=PGSC0003DMT400040940.v4.03 annot-version=v4.03
Sequence

ATGGTTATGTTATTGCTCCTCCTAATCTTAGTCCCCTGCACCATTCCATCATGTTACAGT
TATTTGTTTGAAGGCGAGAGTGTTAACTGTGAAGGTGCTTACAATTGTGGAAACATACGT
GGTGTTAACTACCCGTTCTGGGGAGGTGGTTCACGATCAAGATTATGTGGTAACGACAAT
TTATATCTACAGTGCGAAGATAATCAGACCACTTTGTCTGTTCTTTATTTCATTAGAAAT
ACTATTGGGTATAAACCTTCAGAATTTCATGTACTGATGATTAATCAATCCTCATTCCGT
ATGAAGATTGTTCATCATAATCATTGGAAGAATGTTTGTCCGGAATCTTCTTCACTCTAC
AGTCTTTACAAGTACAACACCACCTTAATCAATGGTCTCAGGTATGTACCAGGAACTACA
TTTATAAACATACACTATGGCTGCAGTCCTGAGGTCCTGTCGACTGTACAGGTGCAGAGC
AATTTTAGTTGTTTTATAATTGGAACAATCAACACTGGTGTGTTCTTTACCGATGAAATT
GTAACAAATGTTCTAGGATGTTCCTTCAGCATACTGGTTCCTCTTGTTTCTACTGCTTAC
AATAAACTGTGGGACGCAACTATAACGCTGCAAGAAGCTGTGAATGAGGGGTTTGAAGTG
GATTACAGTGATGCCTTAGGTGGCTGTTTGGCATGTCAGGATTCAGGAGGAATATGTGAA
GTTAGTCTTGAGTTTCGGTGTCGTTGTGGAGACACAACTCATCCTTCTACCTGTCCAGAT
AATGCTAAGCTACCGGCATATTTGGTGGCGCAGCCAAACACTGATTTTGCAAGAAAGATT
CATTCACTCAAGTTGACAATAGGATTGTCAGTTGCTGGAATTGGCATATTAATCTGCTTT
GGAATCTGGTATACACAGTATAGAAAATCATTCAACAAGTGCATAGGATTCATTAACGGA
AAAACAGAAGATCAGAGTCTAGAGGCATTACTAAAGCAATATGGATCTCTGGCACCAAGG
AGATATAGCTATTGGGAAATCAAGAAAATGACGAATAGATTCAAAGATAAGCTTGGTGAA
GGAGGTTTTGGAGGGGTCTACAAAGGTGAACTTTCTGATGGCCGTGCAGTTGCAGTGAAG
ATTTTAAAAGCATCTAAGGGTGATGAAGAAGAATTTATCAATGAAGTTGCAAGCATCAGC
CAAACTTCACATGTCAATGTCGTGTCTCTTTTAGGATATTGTCTTGATGGGAGCAAAAGA
GCTCTAATTTATGACTTCATGCCAAATGGATCCTTAGAGAAATACATATACGGTGATGGT
TCTCTCTTGGGACTGAACAAATTGTATCAAATTGCAGTTGGAATTGCTAAAGGATTGGAG
TATCTTCACCGTGGATGCAATACAAGAATTTTGCATTTTGACATAAAGCCTCATAACATA
CTCCTTGATGAAGAGTTCTGTCCTAAGATATCAGATTTTGGTTTGGCAAAACTATGCACC
AGGAAAGAAAGCATTGTTTCCATGTTAGGAGCACGAGGGACGATTGGTTATATTGCTCCC
GAAGTAATCAGTAGGAGTTTTGGAGGAGTGTCACACAAATCTGATGTCTATAGTTATGGA
ATGATGGTTCTAGAAATGGTTGGAGGAAGAAAGAATGTCAAGGAAGAAGTGAGCCATACA
AGTGAGATATATTTTCCTTACTGGGCATATCAGCATGTTCAGCTAGACGATGACCTGAAG
CTACATGGGATTATAGACATAGAAGAAGAAGAAACTGCTAGAAAGATGATATTAGTAGGT
CTGTGGTGCATCCAAACTGATCCAGCACAAAGACCATCAATGAGTAAGGTTATTGACATG
CTAGAGGGAAGCCTCGTCTTAGAAATCCCACCAAAACCTTTATTATGTACTCCTTATTGT
TCAGGAAGACATTCTTTGAACACACAGGCAATGCCACTGAACGCCTCCGTAATTTCTTCA
TCCAGTTCATCACTTTGTTCTACTGAAGAATCAGCAAATTTCATAGGCACAGCTACCAAA
GACGGAACTTTCCAGAAGTAA