Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040909
CDS Infomation

pacid=37446836 polypeptide=PGSC0003DMP400027746 locus=PGSC0003DMG400015824 ID=PGSC0003DMT400040909.v4.03 annot-version=v4.03
Sequence

ATGGACTATGCAATTGTGCTCTTACTTGTTTTTCTCTGTCATGAAGTATTTACTGTTTCT
TCATCCAAATTACCTCATCTCTTTCACAAACATCAAACCAGTTCACTTCTAAAATTCAAG
AACACACTTACTGTAGATACCTCAGCCTCTTATCTCTGTCAAGAGCCTTATCCAAAAACG
AGTTCATGGAACATGAGCAGAGATTGTTGCTCATGGGATGGTGTCATATGCGATGAGATG
ACTGGCCATGTAATTGAACTGGACCTCAGCTGCAGCAATCTTGCTGGGACCATCGATTCC
AATAGCAGCCTCTTCCAACTCTCTCATCTCCAAAGGCTTGATCTTTCTCTGAATAACTTC
TCCAATTCTCACATCTCCCCTGAATTTGGCAAGTTTTCGAGCTTGACGCATCTTGATCTT
TCTGACTCCAATTTCTGTGGTCAAATTCCTTCTGAAATCTCTCATCTTTCCAAGTTGCAG
TCTCTTCGTCTCTATGGTCGCCTACGACTCATAGCTCACGATTTTAAATTGCTCCTTCAG
AACTTGACTCAATTAATAGAGCTAGATCTTACTTCCATAAACATCTCTTCCACCATTCCT
CTGAATTTTTCTTCTCATTTAACAACTCTTAGGCTGGGAGATACAGCATTGTATGGGATA
ATACCTGAGACTATATTTCACCTGCCAAACTTGGAAACACTTCACTTATGGGAAAATTTT
CAGCTCAGTGGTTATTTTCCAAAGACCAAATGGAACAGCAGCACATCTCTCCAGAAGTTA
CAACTCAGTTTTGTGAATTTTCCTCATAATTTGCCCGAGTCTATTGGCTATCTAACTTCA
CTGCGTTATTTGTATCTTCAAAATTGCAACCTTAGAGGGCCTATTCCTGAATCTCTTTCG
AAGCTCACTTGCATAGAGGATTTGTACCTTCAATATAACTCCCTGAATGGAACAATACCA
TCAGGGATTTTCTCCCTTCCATCACTAAGTCGTTTAGTCTTGAGCAATAACCACTTTTCT
GGTCAATTTGAGGATTTCAATTCCAATTCCAATTCACTAATCTTGATTGATTTAAGCAAT
AATCAGTTGCAAGGCCATCTTCCCAACTCAATTCAAAACCTTGTGAACCTAACAGATCTT
GATCTTTCTTTCAATAATTTTCATGTGGATGTCAGCCTCTTTTCAGACCTCAAACAGCTT
TTGTATCTTAGTCTTTCATACAATACTATTGATGAAAAGGAAGTTAATTCTACTTTGCCT
GAGTCACTTGAGTACTTACTATTGGCCGCATGTGAAGTGAAAGAATTGGCGTTTCTAAGA
TCTGCAAAACATCTTTCCAACTTGGATCTTTCAAATAATAAGCTTCAAGGAAGAATTCCT
GATTGGGCATGGTCTAACTGGATGTCATTGACAACTCTTAATATATCCCACAATATGCTG
ACGAGTGTGGATACAATTCCTCTTCAGATTGTATATACTATTGATTTACGATCCAATTTG
CTTCAAGGTTCACTACCTGTTCCACCAAATTCCACAACATTCTTCTTCATATCCTATAAT
TATCTCAGTGAAGAAATTCCTTCAGATATTTGCAATTTAACATCACTTGTAATGCTAGAT
TTGGCAAGAAACAATTTACGTGGAGAAATTCCGCCATGTTTGGGAAAAATCACTGCCCTC
CAAGTTTTGGATATGCGCCACAACAATCTTTCTGGGAACATTCCAACGACTTTCAGCAAT
GGAAGTTCACTGAGCAGCCTTAACTTGCATGGAAATAAACTAGAAGGGAAAATTCCCCAA
TCTTTGGCCAATTGCAAAAACTTGCAGCTTCTTGATTTAGGCAATAATAACCTCAACGGC
ACATTTCCTGTGTGGTTGGGAGCTCTGCCAGATCTGCTAGTTTTAAGCTTGAGATCAAAC
AAATTGCATGGACCCATCAGAACATCAAGGATTGTGAACATGTTTCCTGAGCTTCGAATC
ATAGATCTCTCTTATAATGCCTTTTCGGGAAGCTTACCTTCGAGTTTGTTTCAACATCTG
AAAGCCATGAGGACAATTGATCCATCAATGGGAGCACCAAGATATCATGGAGATACATAT
TATGAAGATTCTATTACAGTTGCAACCAAGGGATTTTATCGTGAAATTGTGAGAATCTTG
TATTTGTACACAGTTATCGATCTTTCAAGTAATAAATTTAGGGGGCAAATTCCAAGTATC
ATGGGGGATCTCATTGCAGTTCACATAATGAATTTATCTCATAATGGATTGCAAGGTCAT
ATACCGTCATCATTCGGAGATTTATCTTCAGTTGAATCATTGGACCTATCAGGAAACCAG
CTTTCAGGAGAGATACCACAACAACTGGCTTCTCTTACGTATCTTTCATTCTTAAATCTC
TCCCACAATCATCTCCAAGGATGCATCCCTCAAGGACCTCAATTTCACACTTATGAGAGC
AACTCATATGAAGGCAATGATGGATTACGTGGATTTCCTATTTCAAAAAGTTGTGGCGAT
GCTCGGGTATTAGATACAAATGATACCGTATCTGGACTAGATGATGAAGAAAGCAATTCT
GACTTTCAGAGTGATTTTTGGAAAGGTACTCTTATGGGCTATGGAAGTGGACTATGTATT
GGATTATCCATAATATATTTCATGATTTCAACTGGAAAACCGATTTGGCTTGCAAGAATC
ATCATAGAAATGGAGCACAAAATAATTATGGGAAGGAGAAAGAAGCAGCGAAGGCAAAGG
AATTACAGAAGAAGAAACATTAATCACTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027746
PEP Infomation

pacid=37446836 transcript=PGSC0003DMT400040909 locus=PGSC0003DMG400015824 ID=PGSC0003DMT400040909.v4.03 annot-version=v4.03
Sequence

MDYAIVLLLVFLCHEVFTVSSSKLPHLFHKHQTSSLLKFKNTLTVDTSASYLCQEPYPKT
SSWNMSRDCCSWDGVICDEMTGHVIELDLSCSNLAGTIDSNSSLFQLSHLQRLDLSLNNF
SNSHISPEFGKFSSLTHLDLSDSNFCGQIPSEISHLSKLQSLRLYGRLRLIAHDFKLLLQ
NLTQLIELDLTSINISSTIPLNFSSHLTTLRLGDTALYGIIPETIFHLPNLETLHLWENF
QLSGYFPKTKWNSSTSLQKLQLSFVNFPHNLPESIGYLTSLRYLYLQNCNLRGPIPESLS
KLTCIEDLYLQYNSLNGTIPSGIFSLPSLSRLVLSNNHFSGQFEDFNSNSNSLILIDLSN
NQLQGHLPNSIQNLVNLTDLDLSFNNFHVDVSLFSDLKQLLYLSLSYNTIDEKEVNSTLP
ESLEYLLLAACEVKELAFLRSAKHLSNLDLSNNKLQGRIPDWAWSNWMSLTTLNISHNML
TSVDTIPLQIVYTIDLRSNLLQGSLPVPPNSTTFFFISYNYLSEEIPSDICNLTSLVMLD
LARNNLRGEIPPCLGKITALQVLDMRHNNLSGNIPTTFSNGSSLSSLNLHGNKLEGKIPQ
SLANCKNLQLLDLGNNNLNGTFPVWLGALPDLLVLSLRSNKLHGPIRTSRIVNMFPELRI
IDLSYNAFSGSLPSSLFQHLKAMRTIDPSMGAPRYHGDTYYEDSITVATKGFYREIVRIL
YLYTVIDLSSNKFRGQIPSIMGDLIAVHIMNLSHNGLQGHIPSSFGDLSSVESLDLSGNQ
LSGEIPQQLASLTYLSFLNLSHNHLQGCIPQGPQFHTYESNSYEGNDGLRGFPISKSCGD
ARVLDTNDTVSGLDDEESNSDFQSDFWKGTLMGYGSGLCIGLSIIYFMISTGKPIWLARI
IIEMEHKIIMGRRKKQRRQRNYRRRNINHF*

Transcript Sequence

Transcript ID

PGSC0003DMT400040909
Transcript Infomation

pacid=37446836 locus=PGSC0003DMG400015824 ID=PGSC0003DMT400040909.v4.03 annot-version=v4.03
Sequence

ATGGACTATGCAATTGTGCTCTTACTTGTTTTTCTCTGTCATGAAGTATTTACTGTTTCT
TCATCCAAATTACCTCATCTCTTTCACAAACATCAAACCAGTTCACTTCTAAAATTCAAG
AACACACTTACTGTAGATACCTCAGCCTCTTATCTCTGTCAAGAGCCTTATCCAAAAACG
AGTTCATGGAACATGAGCAGAGATTGTTGCTCATGGGATGGTGTCATATGCGATGAGATG
ACTGGCCATGTAATTGAACTGGACCTCAGCTGCAGCAATCTTGCTGGGACCATCGATTCC
AATAGCAGCCTCTTCCAACTCTCTCATCTCCAAAGGCTTGATCTTTCTCTGAATAACTTC
TCCAATTCTCACATCTCCCCTGAATTTGGCAAGTTTTCGAGCTTGACGCATCTTGATCTT
TCTGACTCCAATTTCTGTGGTCAAATTCCTTCTGAAATCTCTCATCTTTCCAAGTTGCAG
TCTCTTCGTCTCTATGGTCGCCTACGACTCATAGCTCACGATTTTAAATTGCTCCTTCAG
AACTTGACTCAATTAATAGAGCTAGATCTTACTTCCATAAACATCTCTTCCACCATTCCT
CTGAATTTTTCTTCTCATTTAACAACTCTTAGGCTGGGAGATACAGCATTGTATGGGATA
ATACCTGAGACTATATTTCACCTGCCAAACTTGGAAACACTTCACTTATGGGAAAATTTT
CAGCTCAGTGGTTATTTTCCAAAGACCAAATGGAACAGCAGCACATCTCTCCAGAAGTTA
CAACTCAGTTTTGTGAATTTTCCTCATAATTTGCCCGAGTCTATTGGCTATCTAACTTCA
CTGCGTTATTTGTATCTTCAAAATTGCAACCTTAGAGGGCCTATTCCTGAATCTCTTTCG
AAGCTCACTTGCATAGAGGATTTGTACCTTCAATATAACTCCCTGAATGGAACAATACCA
TCAGGGATTTTCTCCCTTCCATCACTAAGTCGTTTAGTCTTGAGCAATAACCACTTTTCT
GGTCAATTTGAGGATTTCAATTCCAATTCCAATTCACTAATCTTGATTGATTTAAGCAAT
AATCAGTTGCAAGGCCATCTTCCCAACTCAATTCAAAACCTTGTGAACCTAACAGATCTT
GATCTTTCTTTCAATAATTTTCATGTGGATGTCAGCCTCTTTTCAGACCTCAAACAGCTT
TTGTATCTTAGTCTTTCATACAATACTATTGATGAAAAGGAAGTTAATTCTACTTTGCCT
GAGTCACTTGAGTACTTACTATTGGCCGCATGTGAAGTGAAAGAATTGGCGTTTCTAAGA
TCTGCAAAACATCTTTCCAACTTGGATCTTTCAAATAATAAGCTTCAAGGAAGAATTCCT
GATTGGGCATGGTCTAACTGGATGTCATTGACAACTCTTAATATATCCCACAATATGCTG
ACGAGTGTGGATACAATTCCTCTTCAGATTGTATATACTATTGATTTACGATCCAATTTG
CTTCAAGGTTCACTACCTGTTCCACCAAATTCCACAACATTCTTCTTCATATCCTATAAT
TATCTCAGTGAAGAAATTCCTTCAGATATTTGCAATTTAACATCACTTGTAATGCTAGAT
TTGGCAAGAAACAATTTACGTGGAGAAATTCCGCCATGTTTGGGAAAAATCACTGCCCTC
CAAGTTTTGGATATGCGCCACAACAATCTTTCTGGGAACATTCCAACGACTTTCAGCAAT
GGAAGTTCACTGAGCAGCCTTAACTTGCATGGAAATAAACTAGAAGGGAAAATTCCCCAA
TCTTTGGCCAATTGCAAAAACTTGCAGCTTCTTGATTTAGGCAATAATAACCTCAACGGC
ACATTTCCTGTGTGGTTGGGAGCTCTGCCAGATCTGCTAGTTTTAAGCTTGAGATCAAAC
AAATTGCATGGACCCATCAGAACATCAAGGATTGTGAACATGTTTCCTGAGCTTCGAATC
ATAGATCTCTCTTATAATGCCTTTTCGGGAAGCTTACCTTCGAGTTTGTTTCAACATCTG
AAAGCCATGAGGACAATTGATCCATCAATGGGAGCACCAAGATATCATGGAGATACATAT
TATGAAGATTCTATTACAGTTGCAACCAAGGGATTTTATCGTGAAATTGTGAGAATCTTG
TATTTGTACACAGTTATCGATCTTTCAAGTAATAAATTTAGGGGGCAAATTCCAAGTATC
ATGGGGGATCTCATTGCAGTTCACATAATGAATTTATCTCATAATGGATTGCAAGGTCAT
ATACCGTCATCATTCGGAGATTTATCTTCAGTTGAATCATTGGACCTATCAGGAAACCAG
CTTTCAGGAGAGATACCACAACAACTGGCTTCTCTTACGTATCTTTCATTCTTAAATCTC
TCCCACAATCATCTCCAAGGATGCATCCCTCAAGGACCTCAATTTCACACTTATGAGAGC
AACTCATATGAAGGCAATGATGGATTACGTGGATTTCCTATTTCAAAAAGTTGTGGCGAT
GCTCGGGTATTAGATACAAATGATACCGTATCTGGACTAGATGATGAAGAAAGCAATTCT
GACTTTCAGAGTGATTTTTGGAAAGGTACTCTTATGGGCTATGGAAGTGGACTATGTATT
GGATTATCCATAATATATTTCATGATTTCAACTGGAAAACCGATTTGGCTTGCAAGAATC
ATCATAGAAATGGAGCACAAAATAATTATGGGAAGGAGAAAGAAGCAGCGAAGGCAAAGG
AATTACAGAAGAAGAAACATTAATCACTTCTAG