Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040843
CDS Infomation

pacid=37460028 polypeptide=PGSC0003DMP400027705 locus=PGSC0003DMG400015791 ID=PGSC0003DMT400040843.v4.03 annot-version=v4.03
Sequence

ATGCCGGTTGCAAAGCTCAGCATTGGTGCTACTCCAGCTGCAATGAAAGCAGACGAGGGA
AATGATCCTCTTGATACCTTAATTAGGCAAGCCATAGGAAAGGAGCCTCTTTTTTCTTTC
TCAAGAACAGGGGATGGGCCTGTCCAGTGGATTCAACTGCTTAATGGATTAGAGCAGCAA
GATAATGCTGGTGGTTGGCCAATGCTAACACCAGCGAAATATCAGAAGTGTGAAAAATGT
TCACGGGAATTTTATTCCCCTATAAATTATCGGAGGCATATGCGTCTACATCGTCGAGCC
TTAAACTTTGATAAGGAGTCTCGCAAATATAGGGATCTGCTGGGAGCATTCTGGGATAAG
CTCTCACTTGATGATATTAAGGAAGTTGTATCATTGCATGATGTTTCAATAAAGGATATT
TCTGGATCTTCACTTGTTCAGGACCTGGCAACATCTATGCGAAAACCGGCGGTCTGGACT
CTTCCCCAAGATTATTATAAGGCTGGCTTAGCTTTGTTGGACCTCATCCAAGGTATACCT
TCCAAGTTTAACTCTCGGGAATTATTTAGCATCCTTGATGATGCTAGCGAAAGAACATTT
TTATGTGCTGGTACAGCTGAGTCTCTGCAAAAATATGTTTTTGATGGGGATGCTTCCAAA
AAAGGTCCTGAGCTGAAAAACTTGGTAGCTTGCACTAGCTTCCTTTTTGAACAGAAACTG
GTAAAAGCATGGTTTGCAGACAAAGATGCTGAAGCTTTGAGATGCCAGAAGTTGCTTTTT
GAAGAGGAGGAAGCTGCTCAAAAAAAGCAAGCTGAGTTGTTGGAAAGGAAAAAACAGAAA
AAGCTTAGACAGAAGGAACAGAGAGAAAGGGAGCAATCAAATTGGGAAAGAGGTGATTTG
GAGGTTCCAATGGCAGAATCTTCCATCCTTTCAGCTGCAGTATCTGATTCTAACTCAAGT
ACTCCCGAAGTATCTGACGATACCTCCTCCTGCCTTGAACTTGTACAATTCTCTAACAAT
GAAGCTATAGACATTGAAGCGCAACTTAATCTCTCTAACCAGCAGCATCTGGATCTGGTA
GAAATTCAGGATGTTGAGCCCCAACCAGTATCTGCACAGAGTCGACGACATTTCCCCCAT
ACCCAGTGGCAAGTGCCAAAGTCACAAAGAATGGGGCGAAATGGTTCCCATAACAACCAG
AATCATCAAGTACAAAAACTTGAACCAGTGCAGAAGCATGGAGTTTTTAAAGACCGAGGT
ACCCCTGTTAATAGCAGTAAAATTTGGACTAAAAAAATTAGAGTGCTAAATGGTGAGCGC
TTTAGACCGGAGCCGCAGAAGGAGGCAATAGATCAAAATCAGAGTAACTGTGAAGTGATG
ATTGGTTCTATTTCTGTTCCAATGAAAAATTGCAGCACTCCCGGACTGGGTAACTGTCCT
GCTGTAGAAAGAGACAACTTCGACAGCACAGAACCAGCCATGACTAAAAAGTGTAATCTT
GCAGTGAAACCAGCAAAGCAAGATGCTCTTCAGGGTGGGTCAAATGGGGCAGCTGTGAAG
CTTTGGAGGCCTGTGAGCAGGCATGGAAGTGGACAACATCCCGAAGAGGCTGTGATTAGT
GAAAAGTTGGATAATCAGATTTCATCCACTGAAAATTGTTTGCAATCGTGCTCTATGGAC
AACCCTATTGGCAAAAGTAAGAATTACACATATCAGGTTGATGGTAATGTTCATCAAGGT
CTGGGATTTTGCAGTACTTCTGCAAAAGCTTTTCTCTCTCAGAGATGGAAGGAGGCTATC
TCCGGGGATCATGTTACATTAGTCCTTTCCAATGACACCGAAGTTTATGGACATCCAGAT
GCGCAAAACAGCAGTTCAGAAGCAGCTCCAACATCAGATGATCAGGAGCATGGCGTTCTT
GTCAAAGCTGATAACCAGCAGACAAATACTGGAGTTTCTAATTTATCTTCCCGTGGCAAT
TCTAAACTTAAGTTCAGGCAGAAGCCTGATAAGTCTATTAAGACAAGGTACATTCCAAAG
CAAAAACCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400027705
PEP Infomation

pacid=37460028 transcript=PGSC0003DMT400040843 locus=PGSC0003DMG400015791 ID=PGSC0003DMT400040843.v4.03 annot-version=v4.03
Sequence

MPVAKLSIGATPAAMKADEGNDPLDTLIRQAIGKEPLFSFSRTGDGPVQWIQLLNGLEQQ
DNAGGWPMLTPAKYQKCEKCSREFYSPINYRRHMRLHRRALNFDKESRKYRDLLGAFWDK
LSLDDIKEVVSLHDVSIKDISGSSLVQDLATSMRKPAVWTLPQDYYKAGLALLDLIQGIP
SKFNSRELFSILDDASERTFLCAGTAESLQKYVFDGDASKKGPELKNLVACTSFLFEQKL
VKAWFADKDAEALRCQKLLFEEEEAAQKKQAELLERKKQKKLRQKEQREREQSNWERGDL
EVPMAESSILSAAVSDSNSSTPEVSDDTSSCLELVQFSNNEAIDIEAQLNLSNQQHLDLV
EIQDVEPQPVSAQSRRHFPHTQWQVPKSQRMGRNGSHNNQNHQVQKLEPVQKHGVFKDRG
TPVNSSKIWTKKIRVLNGERFRPEPQKEAIDQNQSNCEVMIGSISVPMKNCSTPGLGNCP
AVERDNFDSTEPAMTKKCNLAVKPAKQDALQGGSNGAAVKLWRPVSRHGSGQHPEEAVIS
EKLDNQISSTENCLQSCSMDNPIGKSKNYTYQVDGNVHQGLGFCSTSAKAFLSQRWKEAI
SGDHVTLVLSNDTEVYGHPDAQNSSSEAAPTSDDQEHGVLVKADNQQTNTGVSNLSSRGN
SKLKFRQKPDKSIKTRYIPKQKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400040843
Transcript Infomation

pacid=37460028 locus=PGSC0003DMG400015791 ID=PGSC0003DMT400040843.v4.03 annot-version=v4.03
Sequence

ATGCCGGTTGCAAAGCTCAGCATTGGTGCTACTCCAGCTGCAATGAAAGCAGACGAGGGA
AATGATCCTCTTGATACCTTAATTAGGCAAGCCATAGGAAAGGAGCCTCTTTTTTCTTTC
TCAAGAACAGGGGATGGGCCTGTCCAGTGGATTCAACTGCTTAATGGATTAGAGCAGCAA
GATAATGCTGGTGGTTGGCCAATGCTAACACCAGCGAAATATCAGAAGTGTGAAAAATGT
TCACGGGAATTTTATTCCCCTATAAATTATCGGAGGCATATGCGTCTACATCGTCGAGCC
TTAAACTTTGATAAGGAGTCTCGCAAATATAGGGATCTGCTGGGAGCATTCTGGGATAAG
CTCTCACTTGATGATATTAAGGAAGTTGTATCATTGCATGATGTTTCAATAAAGGATATT
TCTGGATCTTCACTTGTTCAGGACCTGGCAACATCTATGCGAAAACCGGCGGTCTGGACT
CTTCCCCAAGATTATTATAAGGCTGGCTTAGCTTTGTTGGACCTCATCCAAGGTATACCT
TCCAAGTTTAACTCTCGGGAATTATTTAGCATCCTTGATGATGCTAGCGAAAGAACATTT
TTATGTGCTGGTACAGCTGAGTCTCTGCAAAAATATGTTTTTGATGGGGATGCTTCCAAA
AAAGGTCCTGAGCTGAAAAACTTGGTAGCTTGCACTAGCTTCCTTTTTGAACAGAAACTG
GTAAAAGCATGGTTTGCAGACAAAGATGCTGAAGCTTTGAGATGCCAGAAGTTGCTTTTT
GAAGAGGAGGAAGCTGCTCAAAAAAAGCAAGCTGAGTTGTTGGAAAGGAAAAAACAGAAA
AAGCTTAGACAGAAGGAACAGAGAGAAAGGGAGCAATCAAATTGGGAAAGAGGTGATTTG
GAGGTTCCAATGGCAGAATCTTCCATCCTTTCAGCTGCAGTATCTGATTCTAACTCAAGT
ACTCCCGAAGTATCTGACGATACCTCCTCCTGCCTTGAACTTGTACAATTCTCTAACAAT
GAAGCTATAGACATTGAAGCGCAACTTAATCTCTCTAACCAGCAGCATCTGGATCTGGTA
GAAATTCAGGATGTTGAGCCCCAACCAGTATCTGCACAGAGTCGACGACATTTCCCCCAT
ACCCAGTGGCAAGTGCCAAAGTCACAAAGAATGGGGCGAAATGGTTCCCATAACAACCAG
AATCATCAAGTACAAAAACTTGAACCAGTGCAGAAGCATGGAGTTTTTAAAGACCGAGGT
ACCCCTGTTAATAGCAGTAAAATTTGGACTAAAAAAATTAGAGTGCTAAATGGTGAGCGC
TTTAGACCGGAGCCGCAGAAGGAGGCAATAGATCAAAATCAGAGTAACTGTGAAGTGATG
ATTGGTTCTATTTCTGTTCCAATGAAAAATTGCAGCACTCCCGGACTGGGTAACTGTCCT
GCTGTAGAAAGAGACAACTTCGACAGCACAGAACCAGCCATGACTAAAAAGTGTAATCTT
GCAGTGAAACCAGCAAAGCAAGATGCTCTTCAGGGTGGGTCAAATGGGGCAGCTGTGAAG
CTTTGGAGGCCTGTGAGCAGGCATGGAAGTGGACAACATCCCGAAGAGGCTGTGATTAGT
GAAAAGTTGGATAATCAGATTTCATCCACTGAAAATTGTTTGCAATCGTGCTCTATGGAC
AACCCTATTGGCAAAAGTAAGAATTACACATATCAGGTTGATGGTAATGTTCATCAAGGT
CTGGGATTTTGCAGTACTTCTGCAAAAGCTTTTCTCTCTCAGAGATGGAAGGAGGCTATC
TCCGGGGATCATGTTACATTAGTCCTTTCCAATGACACCGAAGTTTATGGACATCCAGAT
GCGCAAAACAGCAGTTCAGAAGCAGCTCCAACATCAGATGATCAGGAGCATGGCGTTCTT
GTCAAAGCTGATAACCAGCAGACAAATACTGGAGTTTCTAATTTATCTTCCCGTGGCAAT
TCTAAACTTAAGTTCAGGCAGAAGCCTGATAAGTCTATTAAGACAAGGTACATTCCAAAG
CAAAAACCATAA