Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040840
CDS Infomation

pacid=37463432 polypeptide=PGSC0003DMP400027702 locus=PGSC0003DMG400015790 ID=PGSC0003DMT400040840.v4.03 annot-version=v4.03
Sequence

ATGAGTGGTGAAGATATGATTAAAGCTGAAGGGATCTGTGATGTGGAGGATACTGTATTT
GTAGCTGTGGGGAAGAATGTGAAAGAGGGAAAATCTGTACTTTCTTGGGCTTTGAAGAGC
TTTGCTGGCAGGAGAATTTGTGTTCTTCATGTTCATCAACCTAATCATTTGTTTTCATCC
AAGGATGGGAAGCTTTCAGGTGCAAAGCTGAAACAGCACATGGTGAAGGCATGCCAAGAA
CTTGATCGCCTAAGACTGCACAAACTTCTAAACCAGTATCTTCTCTTTATAACCCAAGCT
GGGATACAAGGGGGTAAGGTGTGGCTTGAAATAAATAATGTGGAGAGAGGGATAATACAT
ATTATTGAAGAACACAAAATTCGGTGGCTTGTCATGGGAGCAGCAGCAGAGACTCACTAC
TCAAAGCAACTGTCAGAGCTCAAGTCCAGCAAAGCTAAATTTGTGTGCCAACATGCACCA
ATGCACTGTCAAATTTGGTTTACTTGCAACGAGTGCCTGATACAGACGAGGTCTATGAAT
AACTCTCTTTCAAGTAGCTTGGAGTCATTATCTTCTCCAGAAGATAACGGAGGAACCAAA
ATGCGCAATCATGTTGGCGACGGTTATGAAGATTTGAACATTTTAGAAAATGCATCAAGC
CCAGCTAACAAAATAGTCAAGGTAGAGATCAAGGGAGACTATTCGCCCGTGCATGAAGCA
CATTTGCATTGTGCAACGTCCCAGCCTTTGCTGGAAGAAGGAAGTTTTCACGGAAAAGCC
TCTAGTGATGAAAGGAGTAGAGTGGAGCATGCTATGATGGATGCTGAGAACTCAAAACAG
AGGGCTTTTGAAGAGTCAGTAAAACGGTGGAGAGCTGAAGAAGATGCTATGGAGGCTATC
CGCATGGCTGAAGTGTCATATAGATTATTCAAGGAAAAGGAAGATCAAAGAAAAGAAAAG
GAGGAAAATTTTGCAAAGCAAAAAGAAGGGATTGAGGAATTGAAGATTCAGCACGACCTG
TGCCTAAATGAACTTCAGATGATCCAGGAGAAGAAGCCTGTACTAGAAAGTCAAATAACT
GAATCCTCCTATGCAGGGAAGGAGTTAGAGGAGAAGATAATTCAAGCAGTAGAGCTCCTA
ATATCCTTTAGGAAGCAGAGGGATGAGATGCAGATAGAGCGTGACAATGCAATCAAAGAA
GTTAACAGATTTAGAAAATTGGTACAAGATGATGCCGATGAGTATTGTATCAAAAACTTC
TTTTCAATATCTTTCTCTGACATCATAGAGGCTACACGAAATTTTGATCCATCTTCAAAG
ATCGGAGAAGGAAAATTCGGAAGTGTTTACAAGGGAATTATTCACCACGTAAAAGTAGCT
ATAAAGATGTTGCCAGCTTGTGGTTCTTTCAGTGATTCGGATTTCCAACATAAGGCAGAA
AGTCTGAGCAGAGTGAGGCATCCAAACCTTGTTACCCTGATTGGGATTTGCTCAGAGTCT
AGGTCCCTCGCTTATGAATTCCTTGAAAATGGAAACCTTGAAGATCACCTGGCCTGCTGC
AAAAAATCCCGTCCTCTTCATTGGCAACATCGGATAAGAATTGCTGTCGAGATATGCTCT
GCTCTTATCTTTGTTCATGCCAACGATCCTTGCATTGTCCATGGGAACTTGAGACCTACC
AACATTCTCCTTGATGCTAAATTTGTCAGTAAAATAAGTGATTTCGGAGTCCATCTCTTG
ATTTCCCAGACTGAGAATTCCAATAATGATGATCCAGAGGCTTCCATTTATGTGGACCCA
GAATATATTGACAATGGACAGTTTACTGTAGAATCTGATGTTTACTCATTTGGCGTCATA
CTTTTACGACTTTTGACTGCAAGACCAGCTTTGGGTATAGTGAGGGACGTCAAGTGTGCT
TTGGAAAGTGGGAACTTGGGTTCAGTTTTGGACTCTTCAGCTGGTGATTGGCCAATTGAA
CAAGCGGAACTGTTAGCTTATCTAGCATTGAGTTGCTGTGAGAAAGATCCTTTAAATCGG
CCTAATATGCTCTCTGAAGTTTGGCCAACCATTGAGCCAATGAGAGATATATGCAAACCA
CACTCAGATTTGAATACTTCATCTCAGGGTTCCAAGGGTCAAAAACGAATTCCTCCTCAT
TTCGTTTGTCCTATTTTTCAGGATGTCATGGAAGATCCACACATAGCAGCAGATGGTTAT
ACATATGAAGGTGATGCAATTAAAGGATGGCTGTATAGCGGACACGATACTTCTCCCATG
ACAAACCTCAAACTCGACACCTGTGATTTGATTCCCAATTATGCTCTCTATCGCGCAATT
CAGGAATGGCAGCAACAGTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027702
PEP Infomation

pacid=37463432 transcript=PGSC0003DMT400040840 locus=PGSC0003DMG400015790 ID=PGSC0003DMT400040840.v4.03 annot-version=v4.03
Sequence

MSGEDMIKAEGICDVEDTVFVAVGKNVKEGKSVLSWALKSFAGRRICVLHVHQPNHLFSS
KDGKLSGAKLKQHMVKACQELDRLRLHKLLNQYLLFITQAGIQGGKVWLEINNVERGIIH
IIEEHKIRWLVMGAAAETHYSKQLSELKSSKAKFVCQHAPMHCQIWFTCNECLIQTRSMN
NSLSSSLESLSSPEDNGGTKMRNHVGDGYEDLNILENASSPANKIVKVEIKGDYSPVHEA
HLHCATSQPLLEEGSFHGKASSDERSRVEHAMMDAENSKQRAFEESVKRWRAEEDAMEAI
RMAEVSYRLFKEKEDQRKEKEENFAKQKEGIEELKIQHDLCLNELQMIQEKKPVLESQIT
ESSYAGKELEEKIIQAVELLISFRKQRDEMQIERDNAIKEVNRFRKLVQDDADEYCIKNF
FSISFSDIIEATRNFDPSSKIGEGKFGSVYKGIIHHVKVAIKMLPACGSFSDSDFQHKAE
SLSRVRHPNLVTLIGICSESRSLAYEFLENGNLEDHLACCKKSRPLHWQHRIRIAVEICS
ALIFVHANDPCIVHGNLRPTNILLDAKFVSKISDFGVHLLISQTENSNNDDPEASIYVDP
EYIDNGQFTVESDVYSFGVILLRLLTARPALGIVRDVKCALESGNLGSVLDSSAGDWPIE
QAELLAYLALSCCEKDPLNRPNMLSEVWPTIEPMRDICKPHSDLNTSSQGSKGQKRIPPH
FVCPIFQDVMEDPHIAADGYTYEGDAIKGWLYSGHDTSPMTNLKLDTCDLIPNYALYRAI
QEWQQQF*

Transcript Sequence

Transcript ID

PGSC0003DMT400040840
Transcript Infomation

pacid=37463432 locus=PGSC0003DMG400015790 ID=PGSC0003DMT400040840.v4.03 annot-version=v4.03
Sequence

ATGAGTGGTGAAGATATGATTAAAGCTGAAGGGATCTGTGATGTGGAGGATACTGTATTT
GTAGCTGTGGGGAAGAATGTGAAAGAGGGAAAATCTGTACTTTCTTGGGCTTTGAAGAGC
TTTGCTGGCAGGAGAATTTGTGTTCTTCATGTTCATCAACCTAATCATTTGTTTTCATCC
AAGGATGGGAAGCTTTCAGGTGCAAAGCTGAAACAGCACATGGTGAAGGCATGCCAAGAA
CTTGATCGCCTAAGACTGCACAAACTTCTAAACCAGTATCTTCTCTTTATAACCCAAGCT
GGGATACAAGGGGGTAAGGTGTGGCTTGAAATAAATAATGTGGAGAGAGGGATAATACAT
ATTATTGAAGAACACAAAATTCGGTGGCTTGTCATGGGAGCAGCAGCAGAGACTCACTAC
TCAAAGCAACTGTCAGAGCTCAAGTCCAGCAAAGCTAAATTTGTGTGCCAACATGCACCA
ATGCACTGTCAAATTTGGTTTACTTGCAACGAGTGCCTGATACAGACGAGGTCTATGAAT
AACTCTCTTTCAAGTAGCTTGGAGTCATTATCTTCTCCAGAAGATAACGGAGGAACCAAA
ATGCGCAATCATGTTGGCGACGGTTATGAAGATTTGAACATTTTAGAAAATGCATCAAGC
CCAGCTAACAAAATAGTCAAGGTAGAGATCAAGGGAGACTATTCGCCCGTGCATGAAGCA
CATTTGCATTGTGCAACGTCCCAGCCTTTGCTGGAAGAAGGAAGTTTTCACGGAAAAGCC
TCTAGTGATGAAAGGAGTAGAGTGGAGCATGCTATGATGGATGCTGAGAACTCAAAACAG
AGGGCTTTTGAAGAGTCAGTAAAACGGTGGAGAGCTGAAGAAGATGCTATGGAGGCTATC
CGCATGGCTGAAGTGTCATATAGATTATTCAAGGAAAAGGAAGATCAAAGAAAAGAAAAG
GAGGAAAATTTTGCAAAGCAAAAAGAAGGGATTGAGGAATTGAAGATTCAGCACGACCTG
TGCCTAAATGAACTTCAGATGATCCAGGAGAAGAAGCCTGTACTAGAAAGTCAAATAACT
GAATCCTCCTATGCAGGGAAGGAGTTAGAGGAGAAGATAATTCAAGCAGTAGAGCTCCTA
ATATCCTTTAGGAAGCAGAGGGATGAGATGCAGATAGAGCGTGACAATGCAATCAAAGAA
GTTAACAGATTTAGAAAATTGGTACAAGATGATGCCGATGAGTATTGTATCAAAAACTTC
TTTTCAATATCTTTCTCTGACATCATAGAGGCTACACGAAATTTTGATCCATCTTCAAAG
ATCGGAGAAGGAAAATTCGGAAGTGTTTACAAGGGAATTATTCACCACGTAAAAGTAGCT
ATAAAGATGTTGCCAGCTTGTGGTTCTTTCAGTGATTCGGATTTCCAACATAAGGCAGAA
AGTCTGAGCAGAGTGAGGCATCCAAACCTTGTTACCCTGATTGGGATTTGCTCAGAGTCT
AGGTCCCTCGCTTATGAATTCCTTGAAAATGGAAACCTTGAAGATCACCTGGCCTGCTGC
AAAAAATCCCGTCCTCTTCATTGGCAACATCGGATAAGAATTGCTGTCGAGATATGCTCT
GCTCTTATCTTTGTTCATGCCAACGATCCTTGCATTGTCCATGGGAACTTGAGACCTACC
AACATTCTCCTTGATGCTAAATTTGTCAGTAAAATAAGTGATTTCGGAGTCCATCTCTTG
ATTTCCCAGACTGAGAATTCCAATAATGATGATCCAGAGGCTTCCATTTATGTGGACCCA
GAATATATTGACAATGGACAGTTTACTGTAGAATCTGATGTTTACTCATTTGGCGTCATA
CTTTTACGACTTTTGACTGCAAGACCAGCTTTGGGTATAGTGAGGGACGTCAAGTGTGCT
TTGGAAAGTGGGAACTTGGGTTCAGTTTTGGACTCTTCAGCTGGTGATTGGCCAATTGAA
CAAGCGGAACTGTTAGCTTATCTAGCATTGAGTTGCTGTGAGAAAGATCCTTTAAATCGG
CCTAATATGCTCTCTGAAGTTTGGCCAACCATTGAGCCAATGAGAGATATATGCAAACCA
CACTCAGATTTGAATACTTCATCTCAGGGTTCCAAGGGTCAAAAACGAATTCCTCCTCAT
TTCGTTTGTCCTATTTTTCAGGATGTCATGGAAGATCCACACATAGCAGCAGATGGTTAT
ACATATGAAGGTGATGCAATTAAAGGATGGCTGTATAGCGGACACGATACTTCTCCCATG
ACAAACCTCAAACTCGACACCTGTGATTTGATTCCCAATTATGCTCTCTATCGCGCAATT
CAGGAATGGCAGCAACAGTTCTGA