Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040825
CDS Infomation

pacid=37463447 polypeptide=PGSC0003DMP400027690 locus=PGSC0003DMG400015786 ID=PGSC0003DMT400040825.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTTTGACTACAACATGGTGTCCAAACTCTTTTCAGCTTCGGTTAGCATTCAGA
AGCAAAAAGCCGTTGGCAGTTTTTGCAGGAATGCGTGTCGGCAAGCTGGATTATCGTGGG
GTTCGTTTGGTTTCGATTACTATGAATAGTGTGTCAAATGGTGGAGTGGAAAAAACAAGT
GCAGGAGGTGTAAATTCGACTGCTTCAGCAGATGGCTTCTCTGGATGGTCTGGAGCTGAT
GGTGCTGAGAAACCTAGTGACTCACAGGGGAAGAAGTCCATCGCTGGGATGGTGGGAGCA
GGAGCAGCTGGTATTATCCTTGTGTCTGGCCTTACCTTTGCTGCATTGTCAATAAGCAGA
CGGAGTTCAACAAGAATTAAACAGCAGATGGAGCCCTTAACAACACAGGAAGAAATGTCA
ATCGATTCTGACAATCATAATGACACAGTTCAAGAGGAGAATGTTTTAGGTGATAATGAA
TTCAAAGATAATAGCGGTGAAGAGTTCCAGGCAAGTAGAATTAGTGAGGATACTGATGAT
GGCAATCCATCCAGTGTTGGTGTCTTTGTTGATGAGAGTCACGAGACCCATATTCAGAAT
GATTTGGATGACAGGAAAGCTAGTGATGATGCAGTAGTTGCTAGTGAAGCCATATCTGAA
TCCCCTGAAGCAACCTTTGTCATGTCAAGCTATGAAAGTGAGGAAGATAGTCTTGGTGCT
GGAAAACCAGAACCAACAACTGAACCAGAACAGAAGAACTATAATGATGACGAAGTTGCT
GCTGCATCAGTTATAAGTCCAAATTCAACATATGAAATTGATGACCAGGTGGGAGTATCT
AGTTTGGAAGGACCAGGACACTCTGAAATTTCATTGGACTCCCCTCCTATTGAGCCTTCT
GACCTCAACACTGCTGTTAATCCGCAATCAGAAGCACTTTTAGAACCCGTGATTACACGC
GAAGTGTATGCAGAGACTCAAAGCTCATTTTCCACCACCAATGTTGACCTGACCGAAATG
CTGGAGGTTCCAAGTGATGGAGATAAGTCATCTTTTGAAGTGCATAAGTCAAACAGAGAC
GAAGTGCCTGGTACAGCTTCAGTTTCAACAACAGCTTATGACCATCTTGGAAACGATTTT
AAGGATATGCATGCAAGCAGATCATCTTTTAACTCAACGGATCCTGGTGATGTCTTTACT
TCTGCTGGTATTCCTGCTCCATCTACTATTTCTCCAGCTCTGCAGGCACCTCCAGGAAGG
GTTTTGGTTCCTGCTTCGTTTGATCAAGTCCAAGGTCAAGCGCTCTCAGCATTACAAGCT
TTGAAGGTTATTGAGTCTGATGTTCAACCTGGAGATCTTTGCACTCGGCGTGAATATGCT
CGTTGGTTGGTCTCTGCTAGTAGTGCTCTATCAAGAACCACTGTCTCAAAGGTCTACCCT
GCAATGTATATTGAGAATGTCACTGATCTTGCCTTCGATGATATTACTCCTGAGGATCCA
GACTTCCCGTCTATACAAGGTTTAGCCGAAGCAGGGTTACTTTCCAGCAAACTCTCAAGA
CGTGACATGCAGTCATCTTTGGATGATGACCAAAGTCCTGTCTTCTTCTGTCCTGAAAGT
CCTTTATCACGTCAAGATCTTGTCAGCTGGAAGATGGCGATAGAGAAAAGACAGCTACCA
ATTGTTGACCAAAAGTCCGTTCAGAGAGTCTCTGGGTTCATAGATGTTGACAAGATTCAT
CCAGATGCATGGCCTGCGCTGGTAGCTGACGTATCATCAGGTGAACAGGGAATAGTGGCC
CTTGCATTCGGGTACACAAGACTCTTCCAACCAGATAAACCTGTCACCAAAGCCCAAGCT
GCTATTGCCCTAGCAACCGGTGAAGCTTCTGATATCGTTGGTGAGGAACTTGCGCGCATT
GAGGCTGAGTCGATGGCTGAAAAAGCTGTTTCAGCCCATAATGCTCTGGTAGCTGAGGTT
GAGAAAGATGTGAATGCAAGTTTTGAGAAGGAACTCTTATTGGAAAGGGAAAAGATTGCT
GCAGTGGAGAAATTGGCTGAGGAAGCAAGAAGAGAGTTGGAGAGTTTGAGAGCTCAGCGG
GAGGAAGAGAATTTAGCATTAATGAAGGAACGTGCTGTTGTTGATTCAGAAATGGAAATT
CTTTCCAGATTAAGACGCGATGTAGAGGAGCAATTACAGACCCTTGTGAGCGACAAATTA
GAGATCACCTATGATAAAGAGAGGATTGAAAAGCTTAGGAAAGATGCAGAATTTGAAACC
CAAGAGATAGCACGTTTGCAGTATGAGCTGGAGGTTGAGAGAAAAGCATTATCCTTGGCT
CGGACTTGGGCGGAAGATGAGGCTAAGAAAGCTAGAGAGCAAGCAAAAGCCTTGGAAGAG
GCTAGAGACCGCTGGCAGAAGCAAGGCATCAAAGTGGTAGTTGACAATGACCTGCAAGAA
GAAGCCAATGCTGGAGTTACATGGCAGAATGCTGGAAATGAGTCTGTTGAATCAACTGTT
AATAGAGCTGAAACATTAGTGGACAAGCTCAAGGAAATGGCTGATACAGTGAGAGGGAAA
TCAAGAGAGACAATTCATATGATTATTGAAAAAATAATGTTGCTGATCACTATGCTTAAG
GAGTGGGCATTAAAGGCAGGCAAGCAAACAGAGGAGTTAAAGGATGTTGCCATGTCGAAG
ATGGGCAACTCAGTACAAGGAATGCAGCAAAGCTCAGCTGAAGTTGGCTCGGCTCTCAAG
GATGGTGTTAAGCGCTTTGCCGATGATTGCAGGGGTGGAGTTGAGAAAATCTCACAGAAA
TTCAAGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027690
PEP Infomation

pacid=37463447 transcript=PGSC0003DMT400040825 locus=PGSC0003DMG400015786 ID=PGSC0003DMT400040825.v4.03 annot-version=v4.03
Sequence

MSSLTTTWCPNSFQLRLAFRSKKPLAVFAGMRVGKLDYRGVRLVSITMNSVSNGGVEKTS
AGGVNSTASADGFSGWSGADGAEKPSDSQGKKSIAGMVGAGAAGIILVSGLTFAALSISR
RSSTRIKQQMEPLTTQEEMSIDSDNHNDTVQEENVLGDNEFKDNSGEEFQASRISEDTDD
GNPSSVGVFVDESHETHIQNDLDDRKASDDAVVASEAISESPEATFVMSSYESEEDSLGA
GKPEPTTEPEQKNYNDDEVAAASVISPNSTYEIDDQVGVSSLEGPGHSEISLDSPPIEPS
DLNTAVNPQSEALLEPVITREVYAETQSSFSTTNVDLTEMLEVPSDGDKSSFEVHKSNRD
EVPGTASVSTTAYDHLGNDFKDMHASRSSFNSTDPGDVFTSAGIPAPSTISPALQAPPGR
VLVPASFDQVQGQALSALQALKVIESDVQPGDLCTRREYARWLVSASSALSRTTVSKVYP
AMYIENVTDLAFDDITPEDPDFPSIQGLAEAGLLSSKLSRRDMQSSLDDDQSPVFFCPES
PLSRQDLVSWKMAIEKRQLPIVDQKSVQRVSGFIDVDKIHPDAWPALVADVSSGEQGIVA
LAFGYTRLFQPDKPVTKAQAAIALATGEASDIVGEELARIEAESMAEKAVSAHNALVAEV
EKDVNASFEKELLLEREKIAAVEKLAEEARRELESLRAQREEENLALMKERAVVDSEMEI
LSRLRRDVEEQLQTLVSDKLEITYDKERIEKLRKDAEFETQEIARLQYELEVERKALSLA
RTWAEDEAKKAREQAKALEEARDRWQKQGIKVVVDNDLQEEANAGVTWQNAGNESVESTV
NRAETLVDKLKEMADTVRGKSRETIHMIIEKIMLLITMLKEWALKAGKQTEELKDVAMSK
MGNSVQGMQQSSAEVGSALKDGVKRFADDCRGGVEKISQKFKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400040825
Transcript Infomation

pacid=37463447 locus=PGSC0003DMG400015786 ID=PGSC0003DMT400040825.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTTTGACTACAACATGGTGTCCAAACTCTTTTCAGCTTCGGTTAGCATTCAGA
AGCAAAAAGCCGTTGGCAGTTTTTGCAGGAATGCGTGTCGGCAAGCTGGATTATCGTGGG
GTTCGTTTGGTTTCGATTACTATGAATAGTGTGTCAAATGGTGGAGTGGAAAAAACAAGT
GCAGGAGGTGTAAATTCGACTGCTTCAGCAGATGGCTTCTCTGGATGGTCTGGAGCTGAT
GGTGCTGAGAAACCTAGTGACTCACAGGGGAAGAAGTCCATCGCTGGGATGGTGGGAGCA
GGAGCAGCTGGTATTATCCTTGTGTCTGGCCTTACCTTTGCTGCATTGTCAATAAGCAGA
CGGAGTTCAACAAGAATTAAACAGCAGATGGAGCCCTTAACAACACAGGAAGAAATGTCA
ATCGATTCTGACAATCATAATGACACAGTTCAAGAGGAGAATGTTTTAGGTGATAATGAA
TTCAAAGATAATAGCGGTGAAGAGTTCCAGGCAAGTAGAATTAGTGAGGATACTGATGAT
GGCAATCCATCCAGTGTTGGTGTCTTTGTTGATGAGAGTCACGAGACCCATATTCAGAAT
GATTTGGATGACAGGAAAGCTAGTGATGATGCAGTAGTTGCTAGTGAAGCCATATCTGAA
TCCCCTGAAGCAACCTTTGTCATGTCAAGCTATGAAAGTGAGGAAGATAGTCTTGGTGCT
GGAAAACCAGAACCAACAACTGAACCAGAACAGAAGAACTATAATGATGACGAAGTTGCT
GCTGCATCAGTTATAAGTCCAAATTCAACATATGAAATTGATGACCAGGTGGGAGTATCT
AGTTTGGAAGGACCAGGACACTCTGAAATTTCATTGGACTCCCCTCCTATTGAGCCTTCT
GACCTCAACACTGCTGTTAATCCGCAATCAGAAGCACTTTTAGAACCCGTGATTACACGC
GAAGTGTATGCAGAGACTCAAAGCTCATTTTCCACCACCAATGTTGACCTGACCGAAATG
CTGGAGGTTCCAAGTGATGGAGATAAGTCATCTTTTGAAGTGCATAAGTCAAACAGAGAC
GAAGTGCCTGGTACAGCTTCAGTTTCAACAACAGCTTATGACCATCTTGGAAACGATTTT
AAGGATATGCATGCAAGCAGATCATCTTTTAACTCAACGGATCCTGGTGATGTCTTTACT
TCTGCTGGTATTCCTGCTCCATCTACTATTTCTCCAGCTCTGCAGGCACCTCCAGGAAGG
GTTTTGGTTCCTGCTTCGTTTGATCAAGTCCAAGGTCAAGCGCTCTCAGCATTACAAGCT
TTGAAGGTTATTGAGTCTGATGTTCAACCTGGAGATCTTTGCACTCGGCGTGAATATGCT
CGTTGGTTGGTCTCTGCTAGTAGTGCTCTATCAAGAACCACTGTCTCAAAGGTCTACCCT
GCAATGTATATTGAGAATGTCACTGATCTTGCCTTCGATGATATTACTCCTGAGGATCCA
GACTTCCCGTCTATACAAGGTTTAGCCGAAGCAGGGTTACTTTCCAGCAAACTCTCAAGA
CGTGACATGCAGTCATCTTTGGATGATGACCAAAGTCCTGTCTTCTTCTGTCCTGAAAGT
CCTTTATCACGTCAAGATCTTGTCAGCTGGAAGATGGCGATAGAGAAAAGACAGCTACCA
ATTGTTGACCAAAAGTCCGTTCAGAGAGTCTCTGGGTTCATAGATGTTGACAAGATTCAT
CCAGATGCATGGCCTGCGCTGGTAGCTGACGTATCATCAGGTGAACAGGGAATAGTGGCC
CTTGCATTCGGGTACACAAGACTCTTCCAACCAGATAAACCTGTCACCAAAGCCCAAGCT
GCTATTGCCCTAGCAACCGGTGAAGCTTCTGATATCGTTGGTGAGGAACTTGCGCGCATT
GAGGCTGAGTCGATGGCTGAAAAAGCTGTTTCAGCCCATAATGCTCTGGTAGCTGAGGTT
GAGAAAGATGTGAATGCAAGTTTTGAGAAGGAACTCTTATTGGAAAGGGAAAAGATTGCT
GCAGTGGAGAAATTGGCTGAGGAAGCAAGAAGAGAGTTGGAGAGTTTGAGAGCTCAGCGG
GAGGAAGAGAATTTAGCATTAATGAAGGAACGTGCTGTTGTTGATTCAGAAATGGAAATT
CTTTCCAGATTAAGACGCGATGTAGAGGAGCAATTACAGACCCTTGTGAGCGACAAATTA
GAGATCACCTATGATAAAGAGAGGATTGAAAAGCTTAGGAAAGATGCAGAATTTGAAACC
CAAGAGATAGCACGTTTGCAGTATGAGCTGGAGGTTGAGAGAAAAGCATTATCCTTGGCT
CGGACTTGGGCGGAAGATGAGGCTAAGAAAGCTAGAGAGCAAGCAAAAGCCTTGGAAGAG
GCTAGAGACCGCTGGCAGAAGCAAGGCATCAAAGTGGTAGTTGACAATGACCTGCAAGAA
GAAGCCAATGCTGGAGTTACATGGCAGAATGCTGGAAATGAGTCTGTTGAATCAACTGTT
AATAGAGCTGAAACATTAGTGGACAAGCTCAAGGAAATGGCTGATACAGTGAGAGGGAAA
TCAAGAGAGACAATTCATATGATTATTGAAAAAATAATGTTGCTGATCACTATGCTTAAG
GAGTGGGCATTAAAGGCAGGCAAGCAAACAGAGGAGTTAAAGGATGTTGCCATGTCGAAG
ATGGGCAACTCAGTACAAGGAATGCAGCAAAGCTCAGCTGAAGTTGGCTCGGCTCTCAAG
GATGGTGTTAAGCGCTTTGCCGATGATTGCAGGGGTGGAGTTGAGAAAATCTCACAGAAA
TTCAAGACATGA