Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040804
CDS Infomation

pacid=37424329 polypeptide=PGSC0003DMP400027675 locus=PGSC0003DMG400015778 ID=PGSC0003DMT400040804.v4.03 annot-version=v4.03
Sequence

ATGGTGGGAGTTTCCTCTATTCAACCCCGCTTCGTCTCTACCTTTCTTGGCGATTGCCGC
TTCATTAACCATCCTCATCACTCACTTCATCGACTCTTCCATTACAGCCCAGGAAATAAA
CATGTCTCCATGCAATGCTCAAGAACATTTTCTGGGTTAACGGATTTGTTATTCAATAGA
CGAAATGTAGATGAACTTCCAAACACCAATCGCAATCGTTTAAGACCAGGTCAAATTTCT
CCTCCTCGACCAGTTCCAGAACAAATACAAAGGCCTCCATATGTGAAGTCTAGGAAGCCA
CCTGGGATTGGTAGTGGCTCCGAAGTGCATGACAAAAAGGGAATAGAAAAGATGAGAGCT
TCGGGAAGGCTTGCTGCACAGGTTCTTCAGTATGCTGGGACATTAGTCAAGCCAGGCATC
ATGACAGACGAAATTGACCAAGCCGTTCACCAAATGATCATTGACAATGGAGCATATCCA
TCACCTCTTGGTTATGGTGGATTTCCAAAGAGTGTATGCACATCAGTAAACGAGTGCATT
TGCCACGGAATCCCAGATTCACGTCCACTTGAGGATGGGGATATTATCAATATTGATGTC
ACCGTTTATCTTAATGGTTACCATGGTGACACCTCAGCGATGTTCTTTGCAGGAAATGTT
GATGAGGAAGCCAAAAACTTGGTGCAAGTGACTAAAGAGTGCTTGGACAAGGCAATATCA
ATATGTGCACCAGGAGTGGAATTCAATAAAATTGGCAAGACGATACATGACCTTGCAGAT
AAACATCGCTATGGGGTTGTGCAACAGTTCGTTGGCCATGGAGTGGGACGTGCTTTCCAC
AGTGATCCAGTCATTCTGCACTACAGGAACAATGATCGCGGACGGATGGTGCTCAATCAG
ACATTCACTATTGAGCCGATGCTGACAATTGGCAGCATAGATGGAGTAATATGGGATGAT
GATTGGACAGTTGTTACAGAAGATGGTAGTCTATCAGCACAGTTTGAGCACACCATTTTG
ATAACTGCAGATGGTGCTGAGATTCTAACGCAGTGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027675
PEP Infomation

pacid=37424329 transcript=PGSC0003DMT400040804 locus=PGSC0003DMG400015778 ID=PGSC0003DMT400040804.v4.03 annot-version=v4.03
Sequence

MVGVSSIQPRFVSTFLGDCRFINHPHHSLHRLFHYSPGNKHVSMQCSRTFSGLTDLLFNR
RNVDELPNTNRNRLRPGQISPPRPVPEQIQRPPYVKSRKPPGIGSGSEVHDKKGIEKMRA
SGRLAAQVLQYAGTLVKPGIMTDEIDQAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI
CHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSAMFFAGNVDEEAKNLVQVTKECLDKAIS
ICAPGVEFNKIGKTIHDLADKHRYGVVQQFVGHGVGRAFHSDPVILHYRNNDRGRMVLNQ
TFTIEPMLTIGSIDGVIWDDDWTVVTEDGSLSAQFEHTILITADGAEILTQC*

Transcript Sequence

Transcript ID

PGSC0003DMT400040804
Transcript Infomation

pacid=37424329 locus=PGSC0003DMG400015778 ID=PGSC0003DMT400040804.v4.03 annot-version=v4.03
Sequence

ATGGTGGGAGTTTCCTCTATTCAACCCCGCTTCGTCTCTACCTTTCTTGGCGATTGCCGC
TTCATTAACCATCCTCATCACTCACTTCATCGACTCTTCCATTACAGCCCAGGAAATAAA
CATGTCTCCATGCAATGCTCAAGAACATTTTCTGGGTTAACGGATTTGTTATTCAATAGA
CGAAATGTAGATGAACTTCCAAACACCAATCGCAATCGTTTAAGACCAGGTCAAATTTCT
CCTCCTCGACCAGTTCCAGAACAAATACAAAGGCCTCCATATGTGAAGTCTAGGAAGCCA
CCTGGGATTGGTAGTGGCTCCGAAGTGCATGACAAAAAGGGAATAGAAAAGATGAGAGCT
TCGGGAAGGCTTGCTGCACAGGTTCTTCAGTATGCTGGGACATTAGTCAAGCCAGGCATC
ATGACAGACGAAATTGACCAAGCCGTTCACCAAATGATCATTGACAATGGAGCATATCCA
TCACCTCTTGGTTATGGTGGATTTCCAAAGAGTGTATGCACATCAGTAAACGAGTGCATT
TGCCACGGAATCCCAGATTCACGTCCACTTGAGGATGGGGATATTATCAATATTGATGTC
ACCGTTTATCTTAATGGTTACCATGGTGACACCTCAGCGATGTTCTTTGCAGGAAATGTT
GATGAGGAAGCCAAAAACTTGGTGCAAGTGACTAAAGAGTGCTTGGACAAGGCAATATCA
ATATGTGCACCAGGAGTGGAATTCAATAAAATTGGCAAGACGATACATGACCTTGCAGAT
AAACATCGCTATGGGGTTGTGCAACAGTTCGTTGGCCATGGAGTGGGACGTGCTTTCCAC
AGTGATCCAGTCATTCTGCACTACAGGAACAATGATCGCGGACGGATGGTGCTCAATCAG
ACATTCACTATTGAGCCGATGCTGACAATTGGCAGCATAGATGGAGTAATATGGGATGAT
GATTGGACAGTTGTTACAGAAGATGGTAGTCTATCAGCACAGTTTGAGCACACCATTTTG
ATAACTGCAGATGGTGCTGAGATTCTAACGCAGTGCTAG