Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040786
CDS Infomation

pacid=37427469 polypeptide=PGSC0003DMP400027661 locus=PGSC0003DMG400015771 ID=PGSC0003DMT400040786.v4.03 annot-version=v4.03
Sequence

ATGAAGATTAAAGTAGTTCATCGAAGTGAACCCCCAAATCAAGAACGTGTTTCGGTTTCC
TACCCAGATATGCCCAAGAAGGAGGTTTTTGATGAGGAACAGGAAAATCAACAACTTGGA
ACTCAAGAACCTGAACCTGAGCCTGATTCTGCAATACCCAAGTTGGGGAATGACAATTTG
AGTCTTGTTGATGCTTCTATTCCAATTGATTCCCTAACCCCATCTACCCAAACTCCAATT
TCTTCTTTGCTGGGTAAGAGAAGAAGGAAGCCCAAGGAGATGATTGATCAGATTTCAACA
ATTCCCTTCAGGAAGAAAAGGGTATTCAAGAAACAGTCTCAATCCAGCAATGGAGTAGCT
GATGCTGGGCGCAAATCAATTAGCACCAAACTAGAGCGGGCTACAGCTGATGGGTCTGGA
AATGCTACCCAAATGAAATCACCAATCATCATTCGAGCAGAGGAGTTCCTGTTAAGTATT
GGAAATGAATATCCCAGCTTCATGAAATTGTTAGTTAGATCACATGTCGGTAGTTGTTTT
TGGATGGGGCTTCCTGTGCCATTCTGCAAGAACCATCTTCCAAGAAAGGACACTCTGGTT
ATTCTTGAAAGTGAGACTGGAGAAGAGTATGAAATAAAATACATTGCTGAAAAGACCGGA
CTTAGTGCAGGATGGAGAAAGTATGCTGCTGCTCACAAGTTGGTTGAGGGAGATGTTTTG
GTTTTTCAACTTGTCGAGCCTACTAGATTCAAGGTGTATGTCATAAGAGCAAATGATCTA
AAGGAGGTGGATGGCGCTCTTAGCCTTCTAAATTTGGATGCACCCGCCAAGCAAAGTGAT
GCAGAGGGAACTATTGGTAATAACATAAAGAAGCGTCAAAAGAAGTCTCTTCCCTTAACT
GTTGTACAAAAGAGGAGACGAAAGGAGGATCTGAGTAAACAACTTGTGCCATTGGAGGCA
CAGTCGGGAAATGATAGCGATGAGGTTGCTTCAGAAATTTTAGAGGGCTCAAGGTCCTCT
GGTCTTGCTGTTAATTTTAGAGACATTAAGAGCCTTGAGGAGTTCCACATTCTGGTGAAT
GGAGTATGCATAGACTCTGAACTTCCTGAACATATAAGGAGAAAGTACTATGAGTTATGC
TGCAGTAAAAATGCTTTTCTTCACGATCGTCTTCTACAAGGTCTTCATTGTAAGTTGGTC
GCTGGTATGATTTTTGAAGTCGTCAACATTGCCGATATGGTAAGAGCCTGCAAGCTCACC
ACCCCACGGAAGGAATTCGATAAATGGGAGAAGTCACTGAAATCTTTTGAACTTCTGGGC
ATGAATGTTGGATTTTTGAGGACTCGTCTGCGCTGGTTGCTGAGTCTTGCATTTGACTCT
GAAGGTGCTTCGGACACCAAGAGGTACTGGGACGCTAAAAAGGAATGGTCTCGAGCTGAA
GATGAGATACGGAATCTTGAAATGAAACTTGAGGAACTGAAACAAGCTTCTGGAAAATAT
GTTGCTGATGTTGAGGCTCTGAAATCAAAAGCTGAGAGCTATGAGCTTATGTTTCAAGGA
GAAGTCAATGCTCCATGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027661
PEP Infomation

pacid=37427469 transcript=PGSC0003DMT400040786 locus=PGSC0003DMG400015771 ID=PGSC0003DMT400040786.v4.03 annot-version=v4.03
Sequence

MKIKVVHRSEPPNQERVSVSYPDMPKKEVFDEEQENQQLGTQEPEPEPDSAIPKLGNDNL
SLVDASIPIDSLTPSTQTPISSLLGKRRRKPKEMIDQISTIPFRKKRVFKKQSQSSNGVA
DAGRKSISTKLERATADGSGNATQMKSPIIIRAEEFLLSIGNEYPSFMKLLVRSHVGSCF
WMGLPVPFCKNHLPRKDTLVILESETGEEYEIKYIAEKTGLSAGWRKYAAAHKLVEGDVL
VFQLVEPTRFKVYVIRANDLKEVDGALSLLNLDAPAKQSDAEGTIGNNIKKRQKKSLPLT
VVQKRRRKEDLSKQLVPLEAQSGNDSDEVASEILEGSRSSGLAVNFRDIKSLEEFHILVN
GVCIDSELPEHIRRKYYELCCSKNAFLHDRLLQGLHCKLVAGMIFEVVNIADMVRACKLT
TPRKEFDKWEKSLKSFELLGMNVGFLRTRLRWLLSLAFDSEGASDTKRYWDAKKEWSRAE
DEIRNLEMKLEELKQASGKYVADVEALKSKAESYELMFQGEVNAPW*

Transcript Sequence

Transcript ID

PGSC0003DMT400040786
Transcript Infomation

pacid=37427469 locus=PGSC0003DMG400015771 ID=PGSC0003DMT400040786.v4.03 annot-version=v4.03
Sequence

ATGAAGATTAAAGTAGTTCATCGAAGTGAACCCCCAAATCAAGAACGTGTTTCGGTTTCC
TACCCAGATATGCCCAAGAAGGAGGTTTTTGATGAGGAACAGGAAAATCAACAACTTGGA
ACTCAAGAACCTGAACCTGAGCCTGATTCTGCAATACCCAAGTTGGGGAATGACAATTTG
AGTCTTGTTGATGCTTCTATTCCAATTGATTCCCTAACCCCATCTACCCAAACTCCAATT
TCTTCTTTGCTGGGTAAGAGAAGAAGGAAGCCCAAGGAGATGATTGATCAGATTTCAACA
ATTCCCTTCAGGAAGAAAAGGGTATTCAAGAAACAGTCTCAATCCAGCAATGGAGTAGCT
GATGCTGGGCGCAAATCAATTAGCACCAAACTAGAGCGGGCTACAGCTGATGGGTCTGGA
AATGCTACCCAAATGAAATCACCAATCATCATTCGAGCAGAGGAGTTCCTGTTAAGTATT
GGAAATGAATATCCCAGCTTCATGAAATTGTTAGTTAGATCACATGTCGGTAGTTGTTTT
TGGATGGGGCTTCCTGTGCCATTCTGCAAGAACCATCTTCCAAGAAAGGACACTCTGGTT
ATTCTTGAAAGTGAGACTGGAGAAGAGTATGAAATAAAATACATTGCTGAAAAGACCGGA
CTTAGTGCAGGATGGAGAAAGTATGCTGCTGCTCACAAGTTGGTTGAGGGAGATGTTTTG
GTTTTTCAACTTGTCGAGCCTACTAGATTCAAGGTGTATGTCATAAGAGCAAATGATCTA
AAGGAGGTGGATGGCGCTCTTAGCCTTCTAAATTTGGATGCACCCGCCAAGCAAAGTGAT
GCAGAGGGAACTATTGGTAATAACATAAAGAAGCGTCAAAAGAAGTCTCTTCCCTTAACT
GTTGTACAAAAGAGGAGACGAAAGGAGGATCTGAGTAAACAACTTGTGCCATTGGAGGCA
CAGTCGGGAAATGATAGCGATGAGGTTGCTTCAGAAATTTTAGAGGGCTCAAGGTCCTCT
GGTCTTGCTGTTAATTTTAGAGACATTAAGAGCCTTGAGGAGTTCCACATTCTGGTGAAT
GGAGTATGCATAGACTCTGAACTTCCTGAACATATAAGGAGAAAGTACTATGAGTTATGC
TGCAGTAAAAATGCTTTTCTTCACGATCGTCTTCTACAAGGTCTTCATTGTAAGTTGGTC
GCTGGTATGATTTTTGAAGTCGTCAACATTGCCGATATGGTAAGAGCCTGCAAGCTCACC
ACCCCACGGAAGGAATTCGATAAATGGGAGAAGTCACTGAAATCTTTTGAACTTCTGGGC
ATGAATGTTGGATTTTTGAGGACTCGTCTGCGCTGGTTGCTGAGTCTTGCATTTGACTCT
GAAGGTGCTTCGGACACCAAGAGGTACTGGGACGCTAAAAAGGAATGGTCTCGAGCTGAA
GATGAGATACGGAATCTTGAAATGAAACTTGAGGAACTGAAACAAGCTTCTGGAAAATAT
GTTGCTGATGTTGAGGCTCTGAAATCAAAAGCTGAGAGCTATGAGCTTATGTTTCAAGGA
GAAGTCAATGCTCCATGGTAA