Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040781
CDS Infomation

pacid=37424398 polypeptide=PGSC0003DMP400027656 locus=PGSC0003DMG400015769 ID=PGSC0003DMT400040781.v4.03 annot-version=v4.03
Sequence

ATGGAAAACAAAGCTGCAGGTCGAGTAGCAATGCCGCCTCCCACCACAGGGAAGCTAATA
ACCATTCTTTCCATCGATGGAGGAGGAATTAGAGGAATCATTCCCGGGGTTATCCTTGCA
TACCTTGAATCACAACTTCAGGAATTGGATGGTGAAGATGCAAGAATCGCGGATTATTTT
GACTTGATAGCAGGAACAAGCACGGGTGGCCTTGTAACAGCCATGTTAGCTGCACCGAAC
AAAGCTAAACGCCCTCTTTATGCTGCCAAAGATATTACTCCTTTCTATCTTGAGCACTCC
CCCAAAATATTTCACCAGACCGGTGGACCATTTGGTGGGGTGATAAATCTAACGAAAATG
TTGAACGGACCAAAATATGATGGGAAGTATCTTCACACACTTATAAAGGGACTACTAGGA
GGTACCAGGTTGCATGATACCTTAACTGCCGTCGTAATTCCAACTTTTGACATCAAGGAA
CTTCAGCCTGTCATCTTTAGCTCATATGAGACAAAATCAAAACCTGTTTCGGATGCGGAA
TTGGCGGACATTTGCATTAGTACCTCGGCAGCGCCAACGTTTCTACCTGCCCATAGTTTC
AAGACCAAGGATGCTCAAAATAATGAACATGAATTCAACCTAATTGATGGTGGTGTGGCT
GCTAATAACCCGACATTGATCGCAATTGGTGAGGTGACAAAGCAAGTACTGATGAAGCAT
GAAGACTTATTTCCTATCAAGCCCATGGAATATGGTCGTTTTCTAGTGATCTCACTGGGG
ACAGGCAATGCAAAGAACGAGGGAAAATACAATGCTAAAATGGCTGCGAAATGGGGATTA
CTTAGCTGGCTAACTCATGACAACTCCACACCAATCATTGAAGCTTTTAATCAAGCAAGC
GCTGATATGGTTGATTATCACAACTTTGTGGTTTTCAAAGCTCTTCAATCGGATGATCAA
TACCTCCGAATCCAGGATGACACTTTGACAGGGAACTTGGCCTCAGTTGATATAGCGACA
AAGGAAAACTTAGAAGGCCTCGTTAAGGTAGGAGAACGGTTGCTGGACAAACCAGCTTCC
AAGATAAACTTAGACAAAGGAGTTTATGAAGCAGTTGAGAACGGAGGAACCAACAAGGAA
GCTCTTCGAAGGTTCGCAAAGACACTTTCAGACGAGAGAAAGTTCCGCCAGTCTAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027656
PEP Infomation

pacid=37424398 transcript=PGSC0003DMT400040781 locus=PGSC0003DMG400015769 ID=PGSC0003DMT400040781.v4.03 annot-version=v4.03
Sequence

MENKAAGRVAMPPPTTGKLITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARIADYF
DLIAGTSTGGLVTAMLAAPNKAKRPLYAAKDITPFYLEHSPKIFHQTGGPFGGVINLTKM
LNGPKYDGKYLHTLIKGLLGGTRLHDTLTAVVIPTFDIKELQPVIFSSYETKSKPVSDAE
LADICISTSAAPTFLPAHSFKTKDAQNNEHEFNLIDGGVAANNPTLIAIGEVTKQVLMKH
EDLFPIKPMEYGRFLVISLGTGNAKNEGKYNAKMAAKWGLLSWLTHDNSTPIIEAFNQAS
ADMVDYHNFVVFKALQSDDQYLRIQDDTLTGNLASVDIATKENLEGLVKVGERLLDKPAS
KINLDKGVYEAVENGGTNKEALRRFAKTLSDERKFRQSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400040781
Transcript Infomation

pacid=37424398 locus=PGSC0003DMG400015769 ID=PGSC0003DMT400040781.v4.03 annot-version=v4.03
Sequence

ATGGAAAACAAAGCTGCAGGTCGAGTAGCAATGCCGCCTCCCACCACAGGGAAGCTAATA
ACCATTCTTTCCATCGATGGAGGAGGAATTAGAGGAATCATTCCCGGGGTTATCCTTGCA
TACCTTGAATCACAACTTCAGGAATTGGATGGTGAAGATGCAAGAATCGCGGATTATTTT
GACTTGATAGCAGGAACAAGCACGGGTGGCCTTGTAACAGCCATGTTAGCTGCACCGAAC
AAAGCTAAACGCCCTCTTTATGCTGCCAAAGATATTACTCCTTTCTATCTTGAGCACTCC
CCCAAAATATTTCACCAGACCGGTGGACCATTTGGTGGGGTGATAAATCTAACGAAAATG
TTGAACGGACCAAAATATGATGGGAAGTATCTTCACACACTTATAAAGGGACTACTAGGA
GGTACCAGGTTGCATGATACCTTAACTGCCGTCGTAATTCCAACTTTTGACATCAAGGAA
CTTCAGCCTGTCATCTTTAGCTCATATGAGACAAAATCAAAACCTGTTTCGGATGCGGAA
TTGGCGGACATTTGCATTAGTACCTCGGCAGCGCCAACGTTTCTACCTGCCCATAGTTTC
AAGACCAAGGATGCTCAAAATAATGAACATGAATTCAACCTAATTGATGGTGGTGTGGCT
GCTAATAACCCGACATTGATCGCAATTGGTGAGGTGACAAAGCAAGTACTGATGAAGCAT
GAAGACTTATTTCCTATCAAGCCCATGGAATATGGTCGTTTTCTAGTGATCTCACTGGGG
ACAGGCAATGCAAAGAACGAGGGAAAATACAATGCTAAAATGGCTGCGAAATGGGGATTA
CTTAGCTGGCTAACTCATGACAACTCCACACCAATCATTGAAGCTTTTAATCAAGCAAGC
GCTGATATGGTTGATTATCACAACTTTGTGGTTTTCAAAGCTCTTCAATCGGATGATCAA
TACCTCCGAATCCAGGATGACACTTTGACAGGGAACTTGGCCTCAGTTGATATAGCGACA
AAGGAAAACTTAGAAGGCCTCGTTAAGGTAGGAGAACGGTTGCTGGACAAACCAGCTTCC
AAGATAAACTTAGACAAAGGAGTTTATGAAGCAGTTGAGAACGGAGGAACCAACAAGGAA
GCTCTTCGAAGGTTCGCAAAGACACTTTCAGACGAGAGAAAGTTCCGCCAGTCTAAATGA