Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040718
CDS Infomation

pacid=37445008 polypeptide=PGSC0003DMP400027609 locus=PGSC0003DMG400015746 ID=PGSC0003DMT400040718.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCTTTTTTCCGTCGATACGAATAAATCAACAAAATTAGATCGTTACAATACT
TATATCCGCAAAGTTAACAGTAGCACTAAGTTCATCGCAGCTTCTTCTAAGCTTCTCTAT
CGTATCACCATTTTAATTTTCGCGTTATTAATCTGCTCATTCATTATAAATTACTTTTTG
TTCGTCTCTAACAACTCAAATCAACACGGCCGCCGCCTCTTCTCCTTTGGTGGCGGCGCC
GGTTGGGAGAAAAAAGTCCGGCATTCTTCTATACCTAAGAAAATCAACGGGAAGGTGGTG
CTAGTGACCGGCGCAGCTGGATTTGTTGGTTCTCATTGTGCATTAGCGTTGAAGAAACGC
GGAGATGGAGTTATTGGTATTGATAATTTCAATTCGTATTATGATCCGTCGTTGAAACGT
GCTCGTCAGGAACTACTGGCGAAGCATGAGATTTTTATCGTGGAAGGTGATATCAATGAT
ATTGATTTGGTTAATAAATTGTTCGATATTGTTCCGTTTACTCATGTTCTTCATTTAGCT
GCCCAGGCCGGCGTTCGTTACGCAATGGAGAATCCTCTTTCGTACATTCATTCAAATGTG
AATGGATTTGTTAATCTGTTAGAAATTGCTAAATCTGCTAATCCACAACCCGCCATTGTT
TGGGCTTCTTCGAGCTCTGTTTATGGGTTAAACACGAAGGTACCTTTTTCTGAAAATGAC
CGGACTGATCAACCAGCTAGTCTCTACGCTGCAACGAAAAAAGCCGGTGAAGAAATTGCT
CACACGTATAACCATATTTACGGATTGTCATTAACTGGGTTACGTTTCTTCACTGTTTAT
GGACCTTGGGGAAGACCAGACATGGCGTATTTCTTCTTCACAAAGGATATGATTCAAGGA
AAGCCGATCAAGGTTTACGTATCGGATAAAGAGGTGGCGCGTGACTTCACGTATATCGAT
GATGTGGTGAAGGGTTGTTTAGGTGCGATTGATACGGCGGAGAAGAGCACCGGTAGCGGC
GGAAAGAAGAGAGGTCCGGCGCAGTTGAGAGTGTATAATTTGGGGAATACTTCGCCGGTA
TCGGTGAAGAAGCTAGTGGCAATTTTGGAAAATTTACTCAACATTAAGGCTAAAAAGAAT
TTGATTAGAATGCCCCAAAACGGCGACGTTCCGTTTACTCATGCTAACGTGAGCCTGGCG
TATAGGGATTTTGGATATAGGCCGACTACAAATTTATCAAGTGGATTAAGGAAATTTGTT
AAGTGGTATTTAAGTTATTATGGGATGCAAGCAAGGACAAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400027609
PEP Infomation

pacid=37445008 transcript=PGSC0003DMT400040718 locus=PGSC0003DMG400015746 ID=PGSC0003DMT400040718.v4.03 annot-version=v4.03
Sequence

MASLFSVDTNKSTKLDRYNTYIRKVNSSTKFIAASSKLLYRITILIFALLICSFIINYFL
FVSNNSNQHGRRLFSFGGGAGWEKKVRHSSIPKKINGKVVLVTGAAGFVGSHCALALKKR
GDGVIGIDNFNSYYDPSLKRARQELLAKHEIFIVEGDINDIDLVNKLFDIVPFTHVLHLA
AQAGVRYAMENPLSYIHSNVNGFVNLLEIAKSANPQPAIVWASSSSVYGLNTKVPFSEND
RTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDMIQG
KPIKVYVSDKEVARDFTYIDDVVKGCLGAIDTAEKSTGSGGKKRGPAQLRVYNLGNTSPV
SVKKLVAILENLLNIKAKKNLIRMPQNGDVPFTHANVSLAYRDFGYRPTTNLSSGLRKFV
KWYLSYYGMQARTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400040718
Transcript Infomation

pacid=37445008 locus=PGSC0003DMG400015746 ID=PGSC0003DMT400040718.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCTTTTTTCCGTCGATACGAATAAATCAACAAAATTAGATCGTTACAATACT
TATATCCGCAAAGTTAACAGTAGCACTAAGTTCATCGCAGCTTCTTCTAAGCTTCTCTAT
CGTATCACCATTTTAATTTTCGCGTTATTAATCTGCTCATTCATTATAAATTACTTTTTG
TTCGTCTCTAACAACTCAAATCAACACGGCCGCCGCCTCTTCTCCTTTGGTGGCGGCGCC
GGTTGGGAGAAAAAAGTCCGGCATTCTTCTATACCTAAGAAAATCAACGGGAAGGTGGTG
CTAGTGACCGGCGCAGCTGGATTTGTTGGTTCTCATTGTGCATTAGCGTTGAAGAAACGC
GGAGATGGAGTTATTGGTATTGATAATTTCAATTCGTATTATGATCCGTCGTTGAAACGT
GCTCGTCAGGAACTACTGGCGAAGCATGAGATTTTTATCGTGGAAGGTGATATCAATGAT
ATTGATTTGGTTAATAAATTGTTCGATATTGTTCCGTTTACTCATGTTCTTCATTTAGCT
GCCCAGGCCGGCGTTCGTTACGCAATGGAGAATCCTCTTTCGTACATTCATTCAAATGTG
AATGGATTTGTTAATCTGTTAGAAATTGCTAAATCTGCTAATCCACAACCCGCCATTGTT
TGGGCTTCTTCGAGCTCTGTTTATGGGTTAAACACGAAGGTACCTTTTTCTGAAAATGAC
CGGACTGATCAACCAGCTAGTCTCTACGCTGCAACGAAAAAAGCCGGTGAAGAAATTGCT
CACACGTATAACCATATTTACGGATTGTCATTAACTGGGTTACGTTTCTTCACTGTTTAT
GGACCTTGGGGAAGACCAGACATGGCGTATTTCTTCTTCACAAAGGATATGATTCAAGGA
AAGCCGATCAAGGTTTACGTATCGGATAAAGAGGTGGCGCGTGACTTCACGTATATCGAT
GATGTGGTGAAGGGTTGTTTAGGTGCGATTGATACGGCGGAGAAGAGCACCGGTAGCGGC
GGAAAGAAGAGAGGTCCGGCGCAGTTGAGAGTGTATAATTTGGGGAATACTTCGCCGGTA
TCGGTGAAGAAGCTAGTGGCAATTTTGGAAAATTTACTCAACATTAAGGCTAAAAAGAAT
TTGATTAGAATGCCCCAAAACGGCGACGTTCCGTTTACTCATGCTAACGTGAGCCTGGCG
TATAGGGATTTTGGATATAGGCCGACTACAAATTTATCAAGTGGATTAAGGAAATTTGTT
AAGTGGTATTTAAGTTATTATGGGATGCAAGCAAGGACAAAATAG