Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040640
CDS Infomation

pacid=37469237 polypeptide=PGSC0003DMP400027556 locus=PGSC0003DMG401015714 ID=PGSC0003DMT400040640.v4.03 annot-version=v4.03
Sequence

ATGAATTCTAAAGTATATTTCCTTTTATCTATTTTAGCCTTTTTGGCTTTCTCTCAACTT
ACTTTAGTTTCTTGTAGAAAGGACAAAACCAACCATGGTTTAGATGGATTCACTCTTGAT
CTTATCCACCGCGATTCTCCTCTTTCTCCCTACTATAACCCTTCCATCACCCCTTCTCAA
CGCCTCCGAGATGCATTCCAAAGATCTTTCTCCCGAGCATCTTTCTTCACGAAAGCCTCC
ATCCATCCCACCACACTTGTCAATCATGCTATTCAATCTGACATCATTCCTGATTTCGCA
GATTATTTAATGAAAATTGCCATTGGTACTCCCCCAAGGAAAACCTATGCCATTCTTGAC
ACTGGGAGTGAATTGACTTGGATACAATGCAAGCCGTGTACTCAATGTTATAAGCAAATA
TTACCCATTTTCGATCCTCGAAAAAGCTCAACGTATAAAATAATTGGTTGTCAAAGTAAG
GAATGTAAGCTAGTAAGAGAGCCAACTTGTGTAAAAACAAATGCTTGTGAATATCAAGTG
CAGTACGGTGATGGTTCTTATAGTACTGGAGATGTTGCTTCTGATACATTCACATTTGCA
TCAACATCTAAAAAGGTCGATGATATTTCAATTCAACATGTTATTTTTGGTTGTGGACAT
AATAATGGTGGCAATTTTGGCAATCATACTGCTGGGATTGTGGGATTAGGAGATTCAAAA
ATTTCTATTATTAATCAACTTGATAAACAAATTAAAGGGAAATTCTCCTATTGTTTAGTC
CCAAATGGTGATTTATCACTATCTTATCATCCTCCCAATACTACAAGTAAAATTAATTTT
GGTCCTAAGGCAGTTGTATCGGGGCCTAACGTTCTTACAACTCCTATAATTCGGAAGAAG
CCTGATGTATTCGGATACGATATATTCTACTTTTTAAACCTCGAAAGTGTTAGCGTTGGA
GGTAAGAAGCTAGAGTTTAAGTCTTCACAACTCATGAATTCTTCTGATGTTGATGAAGAT
TTGGGAAATATTATAATTGATTCTGGGACGACATTGACATTTCTCCCTGAGAATTTTTAC
AACAAATTCGAATCAATTTTGGTGGAAACGATTAAAGGAAAGAGGAAAATAGCTCCCCCG
TATGTCGACCTTCCCATATGTTATGAGACGAAAAGCATTGTCGAATTTCCTAAGATTGTG
TTCCATTTCACGGATGCTGATATCGAGTTGTTACCTATGAATGCATTTTCAAAAGTTGCT
GAAGATGTGACTTGTTTGACAATTGTTGAGGGGGGTCAGTATGGTGTTTATGGAAACTTG
GCACAGATGAATTTCCTTATTGGATATGATCTTGTAAATCGAAAACTCTCTTTCTTACCT
TCTGATTGTACCAAACACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027556
PEP Infomation

pacid=37469237 transcript=PGSC0003DMT400040640 locus=PGSC0003DMG401015714 ID=PGSC0003DMT400040640.v4.03 annot-version=v4.03
Sequence

MNSKVYFLLSILAFLAFSQLTLVSCRKDKTNHGLDGFTLDLIHRDSPLSPYYNPSITPSQ
RLRDAFQRSFSRASFFTKASIHPTTLVNHAIQSDIIPDFADYLMKIAIGTPPRKTYAILD
TGSELTWIQCKPCTQCYKQILPIFDPRKSSTYKIIGCQSKECKLVREPTCVKTNACEYQV
QYGDGSYSTGDVASDTFTFASTSKKVDDISIQHVIFGCGHNNGGNFGNHTAGIVGLGDSK
ISIINQLDKQIKGKFSYCLVPNGDLSLSYHPPNTTSKINFGPKAVVSGPNVLTTPIIRKK
PDVFGYDIFYFLNLESVSVGGKKLEFKSSQLMNSSDVDEDLGNIIIDSGTTLTFLPENFY
NKFESILVETIKGKRKIAPPYVDLPICYETKSIVEFPKIVFHFTDADIELLPMNAFSKVA
EDVTCLTIVEGGQYGVYGNLAQMNFLIGYDLVNRKLSFLPSDCTKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400040640
Transcript Infomation

pacid=37469237 locus=PGSC0003DMG401015714 ID=PGSC0003DMT400040640.v4.03 annot-version=v4.03
Sequence

ATGAATTCTAAAGTATATTTCCTTTTATCTATTTTAGCCTTTTTGGCTTTCTCTCAACTT
ACTTTAGTTTCTTGTAGAAAGGACAAAACCAACCATGGTTTAGATGGATTCACTCTTGAT
CTTATCCACCGCGATTCTCCTCTTTCTCCCTACTATAACCCTTCCATCACCCCTTCTCAA
CGCCTCCGAGATGCATTCCAAAGATCTTTCTCCCGAGCATCTTTCTTCACGAAAGCCTCC
ATCCATCCCACCACACTTGTCAATCATGCTATTCAATCTGACATCATTCCTGATTTCGCA
GATTATTTAATGAAAATTGCCATTGGTACTCCCCCAAGGAAAACCTATGCCATTCTTGAC
ACTGGGAGTGAATTGACTTGGATACAATGCAAGCCGTGTACTCAATGTTATAAGCAAATA
TTACCCATTTTCGATCCTCGAAAAAGCTCAACGTATAAAATAATTGGTTGTCAAAGTAAG
GAATGTAAGCTAGTAAGAGAGCCAACTTGTGTAAAAACAAATGCTTGTGAATATCAAGTG
CAGTACGGTGATGGTTCTTATAGTACTGGAGATGTTGCTTCTGATACATTCACATTTGCA
TCAACATCTAAAAAGGTCGATGATATTTCAATTCAACATGTTATTTTTGGTTGTGGACAT
AATAATGGTGGCAATTTTGGCAATCATACTGCTGGGATTGTGGGATTAGGAGATTCAAAA
ATTTCTATTATTAATCAACTTGATAAACAAATTAAAGGGAAATTCTCCTATTGTTTAGTC
CCAAATGGTGATTTATCACTATCTTATCATCCTCCCAATACTACAAGTAAAATTAATTTT
GGTCCTAAGGCAGTTGTATCGGGGCCTAACGTTCTTACAACTCCTATAATTCGGAAGAAG
CCTGATGTATTCGGATACGATATATTCTACTTTTTAAACCTCGAAAGTGTTAGCGTTGGA
GGTAAGAAGCTAGAGTTTAAGTCTTCACAACTCATGAATTCTTCTGATGTTGATGAAGAT
TTGGGAAATATTATAATTGATTCTGGGACGACATTGACATTTCTCCCTGAGAATTTTTAC
AACAAATTCGAATCAATTTTGGTGGAAACGATTAAAGGAAAGAGGAAAATAGCTCCCCCG
TATGTCGACCTTCCCATATGTTATGAGACGAAAAGCATTGTCGAATTTCCTAAGATTGTG
TTCCATTTCACGGATGCTGATATCGAGTTGTTACCTATGAATGCATTTTCAAAAGTTGCT
GAAGATGTGACTTGTTTGACAATTGTTGAGGGGGGTCAGTATGGTGTTTATGGAAACTTG
GCACAGATGAATTTCCTTATTGGATATGATCTTGTAAATCGAAAACTCTCTTTCTTACCT
TCTGATTGTACCAAACACTGA