Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040627
CDS Infomation

pacid=37467756 polypeptide=PGSC0003DMP400027548 locus=PGSC0003DMG400015709 ID=PGSC0003DMT400040627.v4.03 annot-version=v4.03
Sequence

ATGGCATTCAACAAGCCTAAAAAGCCTCTTTTTTCTCTTAATTCTAGCCTTTGTACCACC
CTCTTTTTCATTGTTCTTTTCACCATTCCAATTCTTCTACTCCTCCATACCCCTACTAAC
TCCATTTGCACCACCACTTCTTCCAAAATCAAGTCATGGTCCGGTGATCTACGCGATGCT
GAGTTTTCATGGAATCGTTTGAAGTTCAACGATAAAAAACCCCCATTGAAAACTCTAAAA
ATCGCGGTCTTTTCAAGGAAATGGCCTATGAGTGCTACCCCCGGTGGCATGGAACGTCAT
GCCTATACGTTGCATATGGCTATGGCAAGTCGTGGTCATCAAGTACATGTCTTTACTTCA
CCTCCTATGGAACATGTTACTCCTACTACATCACATATGATCGATGATTCTTCACAAAGT
TCACCAATTATTCATTGGCATGAAGGCGAGGTAGGGAGATGGCGTTACAATAAGGCATGG
GAACAATATCAAGAGGAAAATGAGAGAGAGCCTTTCGATGTAATTCACTCAGAAAAAAGT
GTGGCATTGCCTCATCATGTAGCTCTTAGCCTTCCGAATCTCGTGGTATCATGGCATGGA
ATAGCTCTAGAGAGTATACAATCAAGCATATTCCAAGATTTAGCTAGAAACCCTAACGAG
CCTATGTCCTCGAGTTTCAACCAAGGCCTACAAGGCATGATACCTAAGGTGCTAAATGAA
ATTAGATTTTTTCATAACTATGCACATCATGTAGCTATAAGTGATAGTTGTGGAGAAATG
CTTAGAGATGTGTATCAAATTCCAAGAAAAAGAGTCCATGTAATTGTCAATGGTGTAGAT
GAAAAAGATTTTAGTGAAGATTCAAGATTAGGTCATGATTTTGGGTCCAAAATAGGTTTA
CCACAAAATGCAACCATAGTACTTGGTGTAGCTGGAAGATTAGTAAAAGATAAAGGACAC
CCTTTACTTCATGAAGCATTTTCACAACTCAAAGAAAAATACCCTAATGTTTATTTAATA
GTAGCTGGCTCTGGACCTTGGTTACAAAGGTACAAAGATTTAGGACCTCAAGTTATAGTA
TTAGGTTCAATGAATCCATCTGAATTAAAAGCATTTTATAACTCAATAGACATATTTGTA
AATCCAACACTTAGACCACAAGGACTTGATCTTACATTAATGGAAGCAATGATGAGTGGG
AAACCAATTATGGCTTCAAGGTTTCCAAGTATAAAAGGAACAATTGTTGTGAATGATGAA
TATGGATTTATGTTTACACCAAATGTGGAGTCATTGGTTGAAGCACTTGAAAGAGTAGTT
GAAGAAGGAAGAGGGAAATTAGCAAGAAGAGGAAAGGCTTGTAGGGAATATGCATCTTCT
ATGTTCACTGCAAAGAAAATGGCTTTGGCTTATGAAAGATTGTTCCTTTGCATTAAGAAT
GAAACATTTTGTACCTACCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027548
PEP Infomation

pacid=37467756 transcript=PGSC0003DMT400040627 locus=PGSC0003DMG400015709 ID=PGSC0003DMT400040627.v4.03 annot-version=v4.03
Sequence

MAFNKPKKPLFSLNSSLCTTLFFIVLFTIPILLLLHTPTNSICTTTSSKIKSWSGDLRDA
EFSWNRLKFNDKKPPLKTLKIAVFSRKWPMSATPGGMERHAYTLHMAMASRGHQVHVFTS
PPMEHVTPTTSHMIDDSSQSSPIIHWHEGEVGRWRYNKAWEQYQEENEREPFDVIHSEKS
VALPHHVALSLPNLVVSWHGIALESIQSSIFQDLARNPNEPMSSSFNQGLQGMIPKVLNE
IRFFHNYAHHVAISDSCGEMLRDVYQIPRKRVHVIVNGVDEKDFSEDSRLGHDFGSKIGL
PQNATIVLGVAGRLVKDKGHPLLHEAFSQLKEKYPNVYLIVAGSGPWLQRYKDLGPQVIV
LGSMNPSELKAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKPIMASRFPSIKGTIVVNDE
YGFMFTPNVESLVEALERVVEEGRGKLARRGKACREYASSMFTAKKMALAYERLFLCIKN
ETFCTYH*

Transcript Sequence

Transcript ID

PGSC0003DMT400040627
Transcript Infomation

pacid=37467756 locus=PGSC0003DMG400015709 ID=PGSC0003DMT400040627.v4.03 annot-version=v4.03
Sequence

ATGGCATTCAACAAGCCTAAAAAGCCTCTTTTTTCTCTTAATTCTAGCCTTTGTACCACC
CTCTTTTTCATTGTTCTTTTCACCATTCCAATTCTTCTACTCCTCCATACCCCTACTAAC
TCCATTTGCACCACCACTTCTTCCAAAATCAAGTCATGGTCCGGTGATCTACGCGATGCT
GAGTTTTCATGGAATCGTTTGAAGTTCAACGATAAAAAACCCCCATTGAAAACTCTAAAA
ATCGCGGTCTTTTCAAGGAAATGGCCTATGAGTGCTACCCCCGGTGGCATGGAACGTCAT
GCCTATACGTTGCATATGGCTATGGCAAGTCGTGGTCATCAAGTACATGTCTTTACTTCA
CCTCCTATGGAACATGTTACTCCTACTACATCACATATGATCGATGATTCTTCACAAAGT
TCACCAATTATTCATTGGCATGAAGGCGAGGTAGGGAGATGGCGTTACAATAAGGCATGG
GAACAATATCAAGAGGAAAATGAGAGAGAGCCTTTCGATGTAATTCACTCAGAAAAAAGT
GTGGCATTGCCTCATCATGTAGCTCTTAGCCTTCCGAATCTCGTGGTATCATGGCATGGA
ATAGCTCTAGAGAGTATACAATCAAGCATATTCCAAGATTTAGCTAGAAACCCTAACGAG
CCTATGTCCTCGAGTTTCAACCAAGGCCTACAAGGCATGATACCTAAGGTGCTAAATGAA
ATTAGATTTTTTCATAACTATGCACATCATGTAGCTATAAGTGATAGTTGTGGAGAAATG
CTTAGAGATGTGTATCAAATTCCAAGAAAAAGAGTCCATGTAATTGTCAATGGTGTAGAT
GAAAAAGATTTTAGTGAAGATTCAAGATTAGGTCATGATTTTGGGTCCAAAATAGGTTTA
CCACAAAATGCAACCATAGTACTTGGTGTAGCTGGAAGATTAGTAAAAGATAAAGGACAC
CCTTTACTTCATGAAGCATTTTCACAACTCAAAGAAAAATACCCTAATGTTTATTTAATA
GTAGCTGGCTCTGGACCTTGGTTACAAAGGTACAAAGATTTAGGACCTCAAGTTATAGTA
TTAGGTTCAATGAATCCATCTGAATTAAAAGCATTTTATAACTCAATAGACATATTTGTA
AATCCAACACTTAGACCACAAGGACTTGATCTTACATTAATGGAAGCAATGATGAGTGGG
AAACCAATTATGGCTTCAAGGTTTCCAAGTATAAAAGGAACAATTGTTGTGAATGATGAA
TATGGATTTATGTTTACACCAAATGTGGAGTCATTGGTTGAAGCACTTGAAAGAGTAGTT
GAAGAAGGAAGAGGGAAATTAGCAAGAAGAGGAAAGGCTTGTAGGGAATATGCATCTTCT
ATGTTCACTGCAAAGAAAATGGCTTTGGCTTATGAAAGATTGTTCCTTTGCATTAAGAAT
GAAACATTTTGTACCTACCATTAA