Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040589
CDS Infomation

pacid=37465236 polypeptide=PGSC0003DMP400027527 locus=PGSC0003DMG400015692 ID=PGSC0003DMT400040589.v4.03 annot-version=v4.03
Sequence

ATGAAGAGAGATCGAGATCGAGAAAGAGAGAAAAAATCCTTTAATGGTGGTGTCTCTAAT
GGCGGTTTTTCAGGTAAAGGTAAGATTTGGGAAGAAGATGAAGAAGAAACACCAGATGCA
GGAATGGATGAGCTTTTAGCTGTTTTGGGTTATAAAGTTAAGTCATCTGATATGGCTGAT
GTTGCTCAAAAACTTGAACAGCTTGAGATGGCTATGGGTACAACTATGGAAGATGGTATC
ACTCATCTTTCTACTGATACTGTTCATAAAAACCCATCTGATATGGCTGGTTGGGTACAA
AGTATGTTATCTTCCATTTCAACAAACTTTGATATGTGTAATCAAGAAAATGAATTAGTC
CTTTCTGGTTGTGGTTCTTCTTCTTCAATCATCGATTTCTCCAGAAACGAACAAAATCAT
CGAACAACCACCATTTCTGATGATGATTTAAGAGCTATACCTGGTGGTGCTGTTTTCAAT
TCAGATAGCAATAAAAGACAGAGATCAAGTTCAAGTTTTTCAACCTCCATGTTAACAGAT
TCATCAGCTGCTAGACCTGTTGTACTAGTTGATTCACAAGAAACTGGTGTTCGTCTTGTT
CATACTTTAATGGCTTGTGCTGAAGCTGTACAACAAGAAAATCTAACTCTAGCTGATCAA
CTTGTTAGACATATTGGTATTCTTGCTGTTTCACAATCTGGTGCTATGAGAAAAGTTGCT
ACTTACTTTGCTGAAGCATTAGCAAGAAGAATCTACAAAATTTATCCACAAGATTCAATT
GAATCATCATATACAGATGTTTTACAAATGCATTTCTACGAAACTTGCCCTTATCTCAAA
TTCGCGCATTTTACTGCAAATCAAGCGATTCTTGAAGCATTTACAGGTTGTAACAAAGTT
CATGTCATTGATTTCAGCTTAAAACAGGGTATGCAATGGCCTGCACTTATGCAAGCTTTA
GCTTTACGCCCCGGTGGACCGCCTGCATTTAGACTCACCGGAATAGGCCCTCCACAACCG
GATAACACAGATGCGTTGCAACAAGTTGGATGGAAGTTGGCTCAGTTAGCTGAAACAATC
GGAGTTGAATTCGAATTCAGGGGATTTGTTGCTAATTCATTAGCAGATCTTGATGCAGCT
ATACTTGATATAAGGCCAAGTGAAACTGAAGCAGTAGCTATAAACTCTGTTTTTGAGCTT
CATCGATTGTTATCCCGGCCAGGAGCAATCGAAAAAGTGTTAAATTCTATTAAACAAATT
AACCCGAAGATCGTTACTCTTGTTGAACAAGAAGCGAATCATAACGCAGGGGTTTTCATT
GATAGATTTAACGAAGCTTTGCATTATTACTCAACCATGTTTGATTCGTTAGAAAGCTCT
GGGTCTTCGTCTTCAGCTTCACCAACTGGGATTCTTCCTCAACCTCCGGTGAACAATCAG
GATTTGGTGATGTCGGAGGTTTATTTAGGGAGACAGATTTGTAACGTGGTGGCTTGTGAA
GGTTCAGATCGAGTTGAACGGCATGAAACACTGAATCAATGGAGGGTTAGGATGAACTCA
TCTGGGTTCGATCCGGTTCATTTGGGTTCAAATGCGTTCAAACAAGCTTCCATGCTTTTA
GCTCTGTTCGCCGGCGGCGATGGTTACAGAGTGGAGGAAAACGATGGGTGTCTTATGTTG
GGGTGGCATACACGGCCACTTATAGCAACCTCCGCCTGGAAGCTCTCGCCGGACTCCGGC
ACCGGCGCCGGAGAAGTTGAGATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027527
PEP Infomation

pacid=37465236 transcript=PGSC0003DMT400040589 locus=PGSC0003DMG400015692 ID=PGSC0003DMT400040589.v4.03 annot-version=v4.03
Sequence

MKRDRDREREKKSFNGGVSNGGFSGKGKIWEEDEEETPDAGMDELLAVLGYKVKSSDMAD
VAQKLEQLEMAMGTTMEDGITHLSTDTVHKNPSDMAGWVQSMLSSISTNFDMCNQENELV
LSGCGSSSSIIDFSRNEQNHRTTTISDDDLRAIPGGAVFNSDSNKRQRSSSSFSTSMLTD
SSAARPVVLVDSQETGVRLVHTLMACAEAVQQENLTLADQLVRHIGILAVSQSGAMRKVA
TYFAEALARRIYKIYPQDSIESSYTDVLQMHFYETCPYLKFAHFTANQAILEAFTGCNKV
HVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETI
GVEFEFRGFVANSLADLDAAILDIRPSETEAVAINSVFELHRLLSRPGAIEKVLNSIKQI
NPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQ
DLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLL
ALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWKLSPDSGTGAGEVEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400040589
Transcript Infomation

pacid=37465236 locus=PGSC0003DMG400015692 ID=PGSC0003DMT400040589.v4.03 annot-version=v4.03
Sequence

ATGAAGAGAGATCGAGATCGAGAAAGAGAGAAAAAATCCTTTAATGGTGGTGTCTCTAAT
GGCGGTTTTTCAGGTAAAGGTAAGATTTGGGAAGAAGATGAAGAAGAAACACCAGATGCA
GGAATGGATGAGCTTTTAGCTGTTTTGGGTTATAAAGTTAAGTCATCTGATATGGCTGAT
GTTGCTCAAAAACTTGAACAGCTTGAGATGGCTATGGGTACAACTATGGAAGATGGTATC
ACTCATCTTTCTACTGATACTGTTCATAAAAACCCATCTGATATGGCTGGTTGGGTACAA
AGTATGTTATCTTCCATTTCAACAAACTTTGATATGTGTAATCAAGAAAATGAATTAGTC
CTTTCTGGTTGTGGTTCTTCTTCTTCAATCATCGATTTCTCCAGAAACGAACAAAATCAT
CGAACAACCACCATTTCTGATGATGATTTAAGAGCTATACCTGGTGGTGCTGTTTTCAAT
TCAGATAGCAATAAAAGACAGAGATCAAGTTCAAGTTTTTCAACCTCCATGTTAACAGAT
TCATCAGCTGCTAGACCTGTTGTACTAGTTGATTCACAAGAAACTGGTGTTCGTCTTGTT
CATACTTTAATGGCTTGTGCTGAAGCTGTACAACAAGAAAATCTAACTCTAGCTGATCAA
CTTGTTAGACATATTGGTATTCTTGCTGTTTCACAATCTGGTGCTATGAGAAAAGTTGCT
ACTTACTTTGCTGAAGCATTAGCAAGAAGAATCTACAAAATTTATCCACAAGATTCAATT
GAATCATCATATACAGATGTTTTACAAATGCATTTCTACGAAACTTGCCCTTATCTCAAA
TTCGCGCATTTTACTGCAAATCAAGCGATTCTTGAAGCATTTACAGGTTGTAACAAAGTT
CATGTCATTGATTTCAGCTTAAAACAGGGTATGCAATGGCCTGCACTTATGCAAGCTTTA
GCTTTACGCCCCGGTGGACCGCCTGCATTTAGACTCACCGGAATAGGCCCTCCACAACCG
GATAACACAGATGCGTTGCAACAAGTTGGATGGAAGTTGGCTCAGTTAGCTGAAACAATC
GGAGTTGAATTCGAATTCAGGGGATTTGTTGCTAATTCATTAGCAGATCTTGATGCAGCT
ATACTTGATATAAGGCCAAGTGAAACTGAAGCAGTAGCTATAAACTCTGTTTTTGAGCTT
CATCGATTGTTATCCCGGCCAGGAGCAATCGAAAAAGTGTTAAATTCTATTAAACAAATT
AACCCGAAGATCGTTACTCTTGTTGAACAAGAAGCGAATCATAACGCAGGGGTTTTCATT
GATAGATTTAACGAAGCTTTGCATTATTACTCAACCATGTTTGATTCGTTAGAAAGCTCT
GGGTCTTCGTCTTCAGCTTCACCAACTGGGATTCTTCCTCAACCTCCGGTGAACAATCAG
GATTTGGTGATGTCGGAGGTTTATTTAGGGAGACAGATTTGTAACGTGGTGGCTTGTGAA
GGTTCAGATCGAGTTGAACGGCATGAAACACTGAATCAATGGAGGGTTAGGATGAACTCA
TCTGGGTTCGATCCGGTTCATTTGGGTTCAAATGCGTTCAAACAAGCTTCCATGCTTTTA
GCTCTGTTCGCCGGCGGCGATGGTTACAGAGTGGAGGAAAACGATGGGTGTCTTATGTTG
GGGTGGCATACACGGCCACTTATAGCAACCTCCGCCTGGAAGCTCTCGCCGGACTCCGGC
ACCGGCGCCGGAGAAGTTGAGATGTGA