Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040588
CDS Infomation

pacid=37464476 polypeptide=PGSC0003DMP400027526 locus=PGSC0003DMG400015691 ID=PGSC0003DMT400040588.v4.03 annot-version=v4.03
Sequence

ATGTCGACAGTAAAGATAACACCATCAGCTGCTTCATTTGCGACTTCTATCAAACACCTT
GCGGGCATTCAACTACCTCGACTCCAAAACACCATTTTTACCTCCAATTCCACTAAGTTT
AGAGCACCCAGAAGAGCTTTTACTGTATCAATGGCGGCTTCACTCGACACCCCTCTTGAA
GTTTGCGTCAAACAATCAATCACAACTCCTAACAAGCTCGGCGACTGCCCATTCACTCAG
AGGGTTTTGCTTACGTTGGAGGAAAAGCACCTTCCATATGACATGAAGTTTGTTGATTTA
AGTAACAAGCCTGACTGGTTTTTGAAGATAAGCCCTGAAGGTAAAGTTCCACTTATTAAG
CTTGACGAGAAATGGGTTCCAGATTCAGATGTCATCACACAGGCACTGGAGGAGAAGTTC
CCTGAACCTCCGCTGACAACTCCTCCTGAGAAGGCTTCCATTGGATCAAAGATCTTCCCG
AAGTTTGTTGCTTTTCTGAAAAGCAAAGACCCCACTGATGGAACAGAGCAGGCTTTACTT
GATGAGCTGACAGCTTTCAATGATTACCTTAAAGAAAATGGTCCATTTATCAACGGAAAT
GAGGTATCTGCTGCTGATTTGTCGCTTGGACCAAAGCTATATCATTTAGAAATATCTTTG
GGGCACTATAAGAATTGGTCTATTCCAGATTCACTTTCCTACGTGAAATCATACATGAAG
AGTATATTCTCCAGAGAATCATTCATCAACACGCGGGCACTAAAAGAGGACGTCATTGAG
GGTTGGCGACCAAAAGTCATGGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027526
PEP Infomation

pacid=37464476 transcript=PGSC0003DMT400040588 locus=PGSC0003DMG400015691 ID=PGSC0003DMT400040588.v4.03 annot-version=v4.03
Sequence

MSTVKITPSAASFATSIKHLAGIQLPRLQNTIFTSNSTKFRAPRRAFTVSMAASLDTPLE
VCVKQSITTPNKLGDCPFTQRVLLTLEEKHLPYDMKFVDLSNKPDWFLKISPEGKVPLIK
LDEKWVPDSDVITQALEEKFPEPPLTTPPEKASIGSKIFPKFVAFLKSKDPTDGTEQALL
DELTAFNDYLKENGPFINGNEVSAADLSLGPKLYHLEISLGHYKNWSIPDSLSYVKSYMK
SIFSRESFINTRALKEDVIEGWRPKVMG*

Transcript Sequence

Transcript ID

PGSC0003DMT400040588
Transcript Infomation

pacid=37464476 locus=PGSC0003DMG400015691 ID=PGSC0003DMT400040588.v4.03 annot-version=v4.03
Sequence

ATGTCGACAGTAAAGATAACACCATCAGCTGCTTCATTTGCGACTTCTATCAAACACCTT
GCGGGCATTCAACTACCTCGACTCCAAAACACCATTTTTACCTCCAATTCCACTAAGTTT
AGAGCACCCAGAAGAGCTTTTACTGTATCAATGGCGGCTTCACTCGACACCCCTCTTGAA
GTTTGCGTCAAACAATCAATCACAACTCCTAACAAGCTCGGCGACTGCCCATTCACTCAG
AGGGTTTTGCTTACGTTGGAGGAAAAGCACCTTCCATATGACATGAAGTTTGTTGATTTA
AGTAACAAGCCTGACTGGTTTTTGAAGATAAGCCCTGAAGGTAAAGTTCCACTTATTAAG
CTTGACGAGAAATGGGTTCCAGATTCAGATGTCATCACACAGGCACTGGAGGAGAAGTTC
CCTGAACCTCCGCTGACAACTCCTCCTGAGAAGGCTTCCATTGGATCAAAGATCTTCCCG
AAGTTTGTTGCTTTTCTGAAAAGCAAAGACCCCACTGATGGAACAGAGCAGGCTTTACTT
GATGAGCTGACAGCTTTCAATGATTACCTTAAAGAAAATGGTCCATTTATCAACGGAAAT
GAGGTATCTGCTGCTGATTTGTCGCTTGGACCAAAGCTATATCATTTAGAAATATCTTTG
GGGCACTATAAGAATTGGTCTATTCCAGATTCACTTTCCTACGTGAAATCATACATGAAG
AGTATATTCTCCAGAGAATCATTCATCAACACGCGGGCACTAAAAGAGGACGTCATTGAG
GGTTGGCGACCAAAAGTCATGGGTTAG