Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040587
CDS Infomation

pacid=37467150 polypeptide=PGSC0003DMP400027525 locus=PGSC0003DMG400015690 ID=PGSC0003DMT400040587.v4.03 annot-version=v4.03
Sequence

ATGGAGGACTATGAAACTTTTCTGATTGAACCTGAACAGGAATGGAAAACGGTGTCGTAT
CATAAGAAGAACAAAAAACAGTCAGGTAAGTCGAAGCAAGGAGAGGAGTTCTCCGGCAAC
TGGAACAACGGGGAGAGCTCAGGTGATGTTTTCCGATCGATCGAACAACATGCGGAGGAG
AGAAGGAAGCGTATAGTTGAGTCTCAGAAGCTCTATGAAGCTGCTTCGGGTGAAAGTTCT
GCCGTCATTGATAAAAACGAGCAGGATAGCGATGGAGAAGATGCCGCTGGTGGTGCAATT
GAGAATGACGGTGTTGTGGAGAAGAAGAGTAAGCCGAAGAAGGTGAAGAAACCTAAGGTT
ACTGTTGCTGAAGCTGCTGCGAAGATCGATAATTCTGATCTAGTTGTTTATCTCGTTGAT
ATATCAACGTCGTTTGATAAGCAGGAAGATATACAGCTAATGCGATTTGCAGATTACTTT
GGACGAGCATTCGGGAAAGTGAGTTCATCTCAGTTCCCATGGATGAAGATTCTTAGGGAA
TCTTCAGTTGAGAAGATGATTGATATCCCTCTTTCTCAAATTTCTGAGGATGTTTATAAG
ACATCCGTTGACTGGCTTAACCAGCGATCGTTTGATGCACTTGGTTCCTTTGTGTTATGG
TCATTGGATAGCATTATTGCTGATCTTGTACAGCACGAAGGAGCTTCAAAGGGATCCAAA
AAGGTGGTTCAGCAAGTATCATCAAAATCTCAGGTTGCCATGTTTGTGGTTCTAGCAATG
GTATTGAGACGGAAACCTGATGTTTTAATCAGTCTCTTACCAATACTGAATGAAAATGGG
AAATACCGAGGACAAGATAAGCTTCCAGTCATGATTTGGGCAGTCACTCAGGCTTGCCAA
GCTGATTTAATCGTGGGATTGTTCATGTGGGTACATTTTCTCTTACCATTGTTAAGCAGT
AAATTGAACAGTAACCCACAGTCGAGAGACTTAATCTTACAGTTGGCTGAGAGAATTGTA
TCCTCACCAAAGGCCCATGCTATACTCATAAATGGTGCAGTAAGAAAGGGAGAGCGTGTT
GTGCCTCCATCAGCTCTTGAGGTTTTGATGAGGATCACCTTCCCAGCACCTTCTGCTCGA
ATTAAGGCCACTGAAAGGTTTGAAGCTGTCTATCCTACTCTGAAAGAGGTAGCTCTTGTT
GCTGCCCCTGGGAGCAAAGCAATGAAGCAGCTAACCCAGCGGATACTGCCTTTTGCTATC
AAAGCTGTTGGGGAAGGTGTTCCTGATCTATCAAAGGAAGCTACTGAGCTATCTGTTTGG
TGTTTGACTCAGAACCCCGACTGTTACAAGCTGTGGGACAATATTTATCTGGACAATGTT
GAAGCAAGTCTGATAATAATAAAGAAGCTGTCTACAGAGTTCAAGGTGCATTCTGCTAAG
GGACCTGGACTTGATCCATTGAAGGTGACCTTAAACAGTCTCAGACTTAAGAGTGAGAAG
GCATTGGCCAGTGTGGATAATGCTGCCAATCAAGCATCCTTGAAGGAAGTGCAGAAGTAC
TGCAAGATTCTACTTGGACGTTTATCCCATGGCAACGGATGCATGAAGGCTTTCTTTGTT
ATCGGTCTAACAATGGCTGTGGGTGTTGCTTTTGTCTCCAAGGAGTCCCCGGAGGTCAAG
AAACTATTGGCAGATTGCTTCAATGACTTGCAGTCCCTGGACTTCAAGAAACTGTTGACA
GATCTCTCCAACGACGTGCAGTCCCTGGATTTCAAGAAACTGTTATCAGATTTCAACTTG
GCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027525
PEP Infomation

pacid=37467150 transcript=PGSC0003DMT400040587 locus=PGSC0003DMG400015690 ID=PGSC0003DMT400040587.v4.03 annot-version=v4.03
Sequence

MEDYETFLIEPEQEWKTVSYHKKNKKQSGKSKQGEEFSGNWNNGESSGDVFRSIEQHAEE
RRKRIVESQKLYEAASGESSAVIDKNEQDSDGEDAAGGAIENDGVVEKKSKPKKVKKPKV
TVAEAAAKIDNSDLVVYLVDISTSFDKQEDIQLMRFADYFGRAFGKVSSSQFPWMKILRE
SSVEKMIDIPLSQISEDVYKTSVDWLNQRSFDALGSFVLWSLDSIIADLVQHEGASKGSK
KVVQQVSSKSQVAMFVVLAMVLRRKPDVLISLLPILNENGKYRGQDKLPVMIWAVTQACQ
ADLIVGLFMWVHFLLPLLSSKLNSNPQSRDLILQLAERIVSSPKAHAILINGAVRKGERV
VPPSALEVLMRITFPAPSARIKATERFEAVYPTLKEVALVAAPGSKAMKQLTQRILPFAI
KAVGEGVPDLSKEATELSVWCLTQNPDCYKLWDNIYLDNVEASLIIIKKLSTEFKVHSAK
GPGLDPLKVTLNSLRLKSEKALASVDNAANQASLKEVQKYCKILLGRLSHGNGCMKAFFV
IGLTMAVGVAFVSKESPEVKKLLADCFNDLQSLDFKKLLTDLSNDVQSLDFKKLLSDFNL
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400040587
Transcript Infomation

pacid=37467150 locus=PGSC0003DMG400015690 ID=PGSC0003DMT400040587.v4.03 annot-version=v4.03
Sequence

ATGGAGGACTATGAAACTTTTCTGATTGAACCTGAACAGGAATGGAAAACGGTGTCGTAT
CATAAGAAGAACAAAAAACAGTCAGGTAAGTCGAAGCAAGGAGAGGAGTTCTCCGGCAAC
TGGAACAACGGGGAGAGCTCAGGTGATGTTTTCCGATCGATCGAACAACATGCGGAGGAG
AGAAGGAAGCGTATAGTTGAGTCTCAGAAGCTCTATGAAGCTGCTTCGGGTGAAAGTTCT
GCCGTCATTGATAAAAACGAGCAGGATAGCGATGGAGAAGATGCCGCTGGTGGTGCAATT
GAGAATGACGGTGTTGTGGAGAAGAAGAGTAAGCCGAAGAAGGTGAAGAAACCTAAGGTT
ACTGTTGCTGAAGCTGCTGCGAAGATCGATAATTCTGATCTAGTTGTTTATCTCGTTGAT
ATATCAACGTCGTTTGATAAGCAGGAAGATATACAGCTAATGCGATTTGCAGATTACTTT
GGACGAGCATTCGGGAAAGTGAGTTCATCTCAGTTCCCATGGATGAAGATTCTTAGGGAA
TCTTCAGTTGAGAAGATGATTGATATCCCTCTTTCTCAAATTTCTGAGGATGTTTATAAG
ACATCCGTTGACTGGCTTAACCAGCGATCGTTTGATGCACTTGGTTCCTTTGTGTTATGG
TCATTGGATAGCATTATTGCTGATCTTGTACAGCACGAAGGAGCTTCAAAGGGATCCAAA
AAGGTGGTTCAGCAAGTATCATCAAAATCTCAGGTTGCCATGTTTGTGGTTCTAGCAATG
GTATTGAGACGGAAACCTGATGTTTTAATCAGTCTCTTACCAATACTGAATGAAAATGGG
AAATACCGAGGACAAGATAAGCTTCCAGTCATGATTTGGGCAGTCACTCAGGCTTGCCAA
GCTGATTTAATCGTGGGATTGTTCATGTGGGTACATTTTCTCTTACCATTGTTAAGCAGT
AAATTGAACAGTAACCCACAGTCGAGAGACTTAATCTTACAGTTGGCTGAGAGAATTGTA
TCCTCACCAAAGGCCCATGCTATACTCATAAATGGTGCAGTAAGAAAGGGAGAGCGTGTT
GTGCCTCCATCAGCTCTTGAGGTTTTGATGAGGATCACCTTCCCAGCACCTTCTGCTCGA
ATTAAGGCCACTGAAAGGTTTGAAGCTGTCTATCCTACTCTGAAAGAGGTAGCTCTTGTT
GCTGCCCCTGGGAGCAAAGCAATGAAGCAGCTAACCCAGCGGATACTGCCTTTTGCTATC
AAAGCTGTTGGGGAAGGTGTTCCTGATCTATCAAAGGAAGCTACTGAGCTATCTGTTTGG
TGTTTGACTCAGAACCCCGACTGTTACAAGCTGTGGGACAATATTTATCTGGACAATGTT
GAAGCAAGTCTGATAATAATAAAGAAGCTGTCTACAGAGTTCAAGGTGCATTCTGCTAAG
GGACCTGGACTTGATCCATTGAAGGTGACCTTAAACAGTCTCAGACTTAAGAGTGAGAAG
GCATTGGCCAGTGTGGATAATGCTGCCAATCAAGCATCCTTGAAGGAAGTGCAGAAGTAC
TGCAAGATTCTACTTGGACGTTTATCCCATGGCAACGGATGCATGAAGGCTTTCTTTGTT
ATCGGTCTAACAATGGCTGTGGGTGTTGCTTTTGTCTCCAAGGAGTCCCCGGAGGTCAAG
AAACTATTGGCAGATTGCTTCAATGACTTGCAGTCCCTGGACTTCAAGAAACTGTTGACA
GATCTCTCCAACGACGTGCAGTCCCTGGATTTCAAGAAACTGTTATCAGATTTCAACTTG
GCTTGA