Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040528
CDS Infomation

pacid=37465884 polypeptide=PGSC0003DMP400027484 locus=PGSC0003DMG400015681 ID=PGSC0003DMT400040528.v4.03 annot-version=v4.03
Sequence

ATGGCATCATCATCTTCTCCTTCTGAGAGTAATTCACAGTATTCATGTCCTCAACAGAAG
TGCAAGTACGATGTCTTTCTAAGTTTTAGAGGCTTAGATACTCGCAATAATTTTACAAGT
CACTTGTACAAAGCTTTGACAAACAGGGTAATACTCACCTTTCTAGATGATGAAAGTCTA
GAGAGTGGTGATACCCTCTGGATAGAACTAGAGAAAGCTATGGAAGAGTCTCAAGTTGCT
GTAATCATTTTCTCAAAAAATTATGCTACATCGAGTTGGTGCTTGGATGAACTAGTGAAG
ATTATGAAATGCAAGGAAGATAATGGACAAACAGTCATACCAGTCTTCTATGATGTGGAT
CCATCACATGTTCGATACCAAAGTGAGAGCTTTAAAGAAGCCTTTGCCAGACACGAATCG
AGGTATACGGATGAGAAGATCGAAGGATGGAGGACTGCTTTAATTGCTGCTGCAAATATA
AAAGGACACAATATCCGTGATAGGAATGAAGCACACTTTATTGAGGATCTTGTTAATGAA
ATTTGGCCCAAATTATGCACGACTTCTTTATCTTCTTTGAAAGATATTGTGGGAATAGAT
GCTCATTTAGAGAAAGTCAACTCCCTTCTAGAGATGACAATCAATGATGTCCGGAGGGTG
TGGATCTGGGGAATTGGGGGAGTTGGTAAAACGACAATAGCAAGAGCTATTTTTGATATA
CACTCATCTAAATTTGATGGTGCTTGTTTCCTTCCGGTCAGTAAAGAAAACAAGCATGAA
ATACATTCTCTGCAAAGTATTCTTCTCTCTAAACTGGCAGGGGGAAAAGAAAATTGTGTG
CTTGATAAGGAGGACGGGAGGGACTGGATGGCTCGTAGACTTTGTAGGAAGAAGGTTCTA
GTTGTGCTTGATAACATAGATCATGATGACCAACTGAAATACCTTGCAGGGGATCTTGGT
TGGTTTGGCAATGGCAGCAGAATAATTGCAACAACTAGGGACAGGCATTTCACAAGGAAA
ACTGATGCTGTATATCGTGTGACTACACTACTTGAACATGATGCAGTTAAGTTGTTCAAC
CAATATGCCTTCAAAGATGAAGTTCCAGATAAGTGTTTCGAGGAGATGACGTTGGAGGTA
GTACGTCATGCTCAAGGCCTTCCTTTAGCCCTGGAAGTGTGGGGTTCTTCCTTTCGTGAG
AAGAATATTATTAGGTGGAGAAGTGCTGTTAACGGATTAAAGAAAAACTTTAATTCAAAA
ATTCTTGGAATACTCAAAGTAAGTTATGATGGGTTGGAGCCCAAAGAACAAGAGATATTT
CTAGATATTGCATGCTTCTTAAAAGGGAGAGAACAAACCAAGATCAAAGAAATTCTAGAG
AGCTGTGATTTTGAAGCTGCTGATGGATTGGGGGAGTTAATTGACAAATCTCTTGTGTTC
ATCTCTGAAAAAGATACGATTGAAATGCATGACTTAATACAAAAGATGGGCAAACACATA
GTGACAGTGCAAAGGGAAGAACTCAGCAGACTATGGCTCACTGAAGATTTCGAAGAATTC
TCAAAAGCAAGTATACAAGGGGCCAGGTCAATTGAAGCAATCTGGGTACAAGAAATTCAA
TACCTAAGCTTTAGGGAAAACGCCATGAATGCTGTGAAAAACCTTAGGATATTATACATC
AATGGTTTTAATACACATGATGGCTCCAATGATCAGTACCTTCCCAGCAAGTTGCGTTGG
TTTGACTGTTGTAAATATCCTTGGGAATCATTGCCAGAAAAATTTGATCCTGACAAGCTT
GTTCATCTTGATCTCCAGCAGAGTTCACTGCTTCATTTATGGACTGAAACAAAGAAATTT
CCTTCCCTACGGAGGCTAGTTCTCAGCGGCTGTGAAAACCTCAGGGGAACACCAGATTTC
ACGGATATGCCAAATTTAGAGTATTTGGGTCTGGAAGAGTGTAGTAATCTTACGACGGTT
CACCATTCCCTAAAAGATTCCAAAAAACTCAAGAAGTTAAATTTGAGAGATTGTAAAAGG
CTTGCGACATTTGAATTTGTCAGCGGGGTGTCTCTTGAATATCTAGATATACAAGGTTGC
TCTGGTTTAGAGAAATTTCCAAGCATCAAGGAAAAAGGGAAGCGGAAGAAAAGGATTCAT
GTGCAATGCTCTGGGTTAAGTGAACTACCATCAGCTATGATTGAGCACCAATCTAGTCTT
ACAAATCTAGATTTGAGTGGCATGAAAAACCTTGAAAAACTTTCACGCAGCATTGGCAAG
TTGAAACATTTGGTGATGCTAAAAGTGTCCTACTGCTCAAAACTCAGTAGCTTGCCAAAA
GAGATAGGTCATTTAGAAAACTTGGAGGAGCTTGATGCCAGCTATACTCTAATTTCACAA
CCTCCGTCTTCCATCTTCCGCTTGAACAAGCTTAAATTATTGACTTTTGCAAAACAAAAA
TCAGAAGCAGGCCTCGAAGATGGAGTGCACTTTGTCTTCCCTCCGGTGAATGGAGGGCTA
CACTCATTGGAAGATCTGGATCTCAGTTACTGCAATTTATTAGATGGAGGACTTCCGGAA
GACATTGGATCCTTATCCTCTTTGAAAGAGTTGAATCTCAGCTACTGCAATATAATAGAT
GGAGGACTTCCGGATGACATTGGATCCTTATCCTCTTTGAAAAAGTTGAATCTCAGGGGA
AATAACTTTGAGCATTTGCCTCAAGGCATGGCCCGACTTGGTTCTCTTCAGTCGTTGAAC
TTATTAGATTGCAAGAGTCTTACACAGCTGCCAGAATTTATACCGCAATTAGGCACAATA
TATGCCGATCGGAGAAATGATTCGATCTATAATTCGTTGTTTCATAATATCTCATCATCA
TCAGTGCCGGGCTCAAGATCTTTGCTCAGGAGGTTCGAAGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400027484
PEP Infomation

pacid=37465884 transcript=PGSC0003DMT400040528 locus=PGSC0003DMG400015681 ID=PGSC0003DMT400040528.v4.03 annot-version=v4.03
Sequence

MASSSSPSESNSQYSCPQQKCKYDVFLSFRGLDTRNNFTSHLYKALTNRVILTFLDDESL
ESGDTLWIELEKAMEESQVAVIIFSKNYATSSWCLDELVKIMKCKEDNGQTVIPVFYDVD
PSHVRYQSESFKEAFARHESRYTDEKIEGWRTALIAAANIKGHNIRDRNEAHFIEDLVNE
IWPKLCTTSLSSLKDIVGIDAHLEKVNSLLEMTINDVRRVWIWGIGGVGKTTIARAIFDI
HSSKFDGACFLPVSKENKHEIHSLQSILLSKLAGGKENCVLDKEDGRDWMARRLCRKKVL
VVLDNIDHDDQLKYLAGDLGWFGNGSRIIATTRDRHFTRKTDAVYRVTTLLEHDAVKLFN
QYAFKDEVPDKCFEEMTLEVVRHAQGLPLALEVWGSSFREKNIIRWRSAVNGLKKNFNSK
ILGILKVSYDGLEPKEQEIFLDIACFLKGREQTKIKEILESCDFEAADGLGELIDKSLVF
ISEKDTIEMHDLIQKMGKHIVTVQREELSRLWLTEDFEEFSKASIQGARSIEAIWVQEIQ
YLSFRENAMNAVKNLRILYINGFNTHDGSNDQYLPSKLRWFDCCKYPWESLPEKFDPDKL
VHLDLQQSSLLHLWTETKKFPSLRRLVLSGCENLRGTPDFTDMPNLEYLGLEECSNLTTV
HHSLKDSKKLKKLNLRDCKRLATFEFVSGVSLEYLDIQGCSGLEKFPSIKEKGKRKKRIH
VQCSGLSELPSAMIEHQSSLTNLDLSGMKNLEKLSRSIGKLKHLVMLKVSYCSKLSSLPK
EIGHLENLEELDASYTLISQPPSSIFRLNKLKLLTFAKQKSEAGLEDGVHFVFPPVNGGL
HSLEDLDLSYCNLLDGGLPEDIGSLSSLKELNLSYCNIIDGGLPDDIGSLSSLKKLNLRG
NNFEHLPQGMARLGSLQSLNLLDCKSLTQLPEFIPQLGTIYADRRNDSIYNSLFHNISSS
SVPGSRSLLRRFEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400040528
Transcript Infomation

pacid=37465884 locus=PGSC0003DMG400015681 ID=PGSC0003DMT400040528.v4.03 annot-version=v4.03
Sequence

ATGGCATCATCATCTTCTCCTTCTGAGAGTAATTCACAGTATTCATGTCCTCAACAGAAG
TGCAAGTACGATGTCTTTCTAAGTTTTAGAGGCTTAGATACTCGCAATAATTTTACAAGT
CACTTGTACAAAGCTTTGACAAACAGGGTAATACTCACCTTTCTAGATGATGAAAGTCTA
GAGAGTGGTGATACCCTCTGGATAGAACTAGAGAAAGCTATGGAAGAGTCTCAAGTTGCT
GTAATCATTTTCTCAAAAAATTATGCTACATCGAGTTGGTGCTTGGATGAACTAGTGAAG
ATTATGAAATGCAAGGAAGATAATGGACAAACAGTCATACCAGTCTTCTATGATGTGGAT
CCATCACATGTTCGATACCAAAGTGAGAGCTTTAAAGAAGCCTTTGCCAGACACGAATCG
AGGTATACGGATGAGAAGATCGAAGGATGGAGGACTGCTTTAATTGCTGCTGCAAATATA
AAAGGACACAATATCCGTGATAGGAATGAAGCACACTTTATTGAGGATCTTGTTAATGAA
ATTTGGCCCAAATTATGCACGACTTCTTTATCTTCTTTGAAAGATATTGTGGGAATAGAT
GCTCATTTAGAGAAAGTCAACTCCCTTCTAGAGATGACAATCAATGATGTCCGGAGGGTG
TGGATCTGGGGAATTGGGGGAGTTGGTAAAACGACAATAGCAAGAGCTATTTTTGATATA
CACTCATCTAAATTTGATGGTGCTTGTTTCCTTCCGGTCAGTAAAGAAAACAAGCATGAA
ATACATTCTCTGCAAAGTATTCTTCTCTCTAAACTGGCAGGGGGAAAAGAAAATTGTGTG
CTTGATAAGGAGGACGGGAGGGACTGGATGGCTCGTAGACTTTGTAGGAAGAAGGTTCTA
GTTGTGCTTGATAACATAGATCATGATGACCAACTGAAATACCTTGCAGGGGATCTTGGT
TGGTTTGGCAATGGCAGCAGAATAATTGCAACAACTAGGGACAGGCATTTCACAAGGAAA
ACTGATGCTGTATATCGTGTGACTACACTACTTGAACATGATGCAGTTAAGTTGTTCAAC
CAATATGCCTTCAAAGATGAAGTTCCAGATAAGTGTTTCGAGGAGATGACGTTGGAGGTA
GTACGTCATGCTCAAGGCCTTCCTTTAGCCCTGGAAGTGTGGGGTTCTTCCTTTCGTGAG
AAGAATATTATTAGGTGGAGAAGTGCTGTTAACGGATTAAAGAAAAACTTTAATTCAAAA
ATTCTTGGAATACTCAAAGTAAGTTATGATGGGTTGGAGCCCAAAGAACAAGAGATATTT
CTAGATATTGCATGCTTCTTAAAAGGGAGAGAACAAACCAAGATCAAAGAAATTCTAGAG
AGCTGTGATTTTGAAGCTGCTGATGGATTGGGGGAGTTAATTGACAAATCTCTTGTGTTC
ATCTCTGAAAAAGATACGATTGAAATGCATGACTTAATACAAAAGATGGGCAAACACATA
GTGACAGTGCAAAGGGAAGAACTCAGCAGACTATGGCTCACTGAAGATTTCGAAGAATTC
TCAAAAGCAAGTATACAAGGGGCCAGGTCAATTGAAGCAATCTGGGTACAAGAAATTCAA
TACCTAAGCTTTAGGGAAAACGCCATGAATGCTGTGAAAAACCTTAGGATATTATACATC
AATGGTTTTAATACACATGATGGCTCCAATGATCAGTACCTTCCCAGCAAGTTGCGTTGG
TTTGACTGTTGTAAATATCCTTGGGAATCATTGCCAGAAAAATTTGATCCTGACAAGCTT
GTTCATCTTGATCTCCAGCAGAGTTCACTGCTTCATTTATGGACTGAAACAAAGAAATTT
CCTTCCCTACGGAGGCTAGTTCTCAGCGGCTGTGAAAACCTCAGGGGAACACCAGATTTC
ACGGATATGCCAAATTTAGAGTATTTGGGTCTGGAAGAGTGTAGTAATCTTACGACGGTT
CACCATTCCCTAAAAGATTCCAAAAAACTCAAGAAGTTAAATTTGAGAGATTGTAAAAGG
CTTGCGACATTTGAATTTGTCAGCGGGGTGTCTCTTGAATATCTAGATATACAAGGTTGC
TCTGGTTTAGAGAAATTTCCAAGCATCAAGGAAAAAGGGAAGCGGAAGAAAAGGATTCAT
GTGCAATGCTCTGGGTTAAGTGAACTACCATCAGCTATGATTGAGCACCAATCTAGTCTT
ACAAATCTAGATTTGAGTGGCATGAAAAACCTTGAAAAACTTTCACGCAGCATTGGCAAG
TTGAAACATTTGGTGATGCTAAAAGTGTCCTACTGCTCAAAACTCAGTAGCTTGCCAAAA
GAGATAGGTCATTTAGAAAACTTGGAGGAGCTTGATGCCAGCTATACTCTAATTTCACAA
CCTCCGTCTTCCATCTTCCGCTTGAACAAGCTTAAATTATTGACTTTTGCAAAACAAAAA
TCAGAAGCAGGCCTCGAAGATGGAGTGCACTTTGTCTTCCCTCCGGTGAATGGAGGGCTA
CACTCATTGGAAGATCTGGATCTCAGTTACTGCAATTTATTAGATGGAGGACTTCCGGAA
GACATTGGATCCTTATCCTCTTTGAAAGAGTTGAATCTCAGCTACTGCAATATAATAGAT
GGAGGACTTCCGGATGACATTGGATCCTTATCCTCTTTGAAAAAGTTGAATCTCAGGGGA
AATAACTTTGAGCATTTGCCTCAAGGCATGGCCCGACTTGGTTCTCTTCAGTCGTTGAAC
TTATTAGATTGCAAGAGTCTTACACAGCTGCCAGAATTTATACCGCAATTAGGCACAATA
TATGCCGATCGGAGAAATGATTCGATCTATAATTCGTTGTTTCATAATATCTCATCATCA
TCAGTGCCGGGCTCAAGATCTTTGCTCAGGAGGTTCGAAGTATAA