Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040518
CDS Infomation

pacid=37466626 polypeptide=PGSC0003DMP400027474 locus=PGSC0003DMG400015677 ID=PGSC0003DMT400040518.v4.03 annot-version=v4.03
Sequence

ATGGAAAAATCACATGAAAATGTTAAGGCATTTGGATGGGCAGCTAGAGATACTTCTGGG
GTACTTTCTCCTTTCAACTTCTCAAGAAGGGTGACTGGTGAAAAAGATGTGCAATTCAAA
GTTATGTATTGTGGAATTTGTCATTCTGATCTTCATCAACTCAAGAATGAATGGAGCAAT
AGTATATATCCAATGGTACCAGGGCATGAAGTTGTTGGTGTAGTAACTGAAATTGGTAGC
AAAGTTGAGAAATTCAAAATTGGAGACAAAGTTGGAGTTGGATGTTTAGTAGGATCATGT
AGAAAATGTGAAAATTGTGACAACAATCTTGAAAATTACTGTCGTGATCAGATCATGACA
TACAATGGTGTTTACACCGATGGAATCCCCACGTATGGTGGTTACTCCGATATAATGGTA
ACCAACGAGCACTATGTGGTCCATTGGCCCGAAAATTTACCAATGGAAGCAGCTCCCCTG
TTATGTGCAGGGATCACAACTTATAGTCCATTGAGATATTTTGGACTTGACAAGCCCGGA
ATGCACATTGGTGTTGTTGGTCTGGGTGGTTTGGGACATATGGCTGTGAAATTTGCTAAG
GCGTTTGGAACCAAAGTTACTGTGATAAGTACATCTGTTAGTAAGAAAGACGAAGCAATT
GATCGTTTAGGGGCAGACTCGTTTTTGGTCAGTCGTGATCCTGACCAAATGCAGGGTGCA
GCGGGGTCACTAGATGGCATCATCGATACCGTATCCGAAATTCATCCTCTTCTTCCATTG
ATTAATTTGTTGAAAACTCATGGGAAGCTTGTGATGGTTGGTGCCCCTGAAAAACCACTA
GAGTTACCTGTATTTCCCCTGCTTTTAGGAAGGAAGCTAGTGGCGGGGAGCGCGATAGGA
GGGATGAAGGAGACACAAGAGATGGTAGATTTCGCGGCAAAGCATAGCATAACACCAGAT
GTTGAAGTTGTGCCAATGGACTATGTGAATAAAGCGTTGGAACGCCTTTTGAAATCGGAT
GTGAAGTATCGTTTTGTGCTTGACATTGGCAACACATTAAACAAGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027474
PEP Infomation

pacid=37466626 transcript=PGSC0003DMT400040518 locus=PGSC0003DMG400015677 ID=PGSC0003DMT400040518.v4.03 annot-version=v4.03
Sequence

MEKSHENVKAFGWAARDTSGVLSPFNFSRRVTGEKDVQFKVMYCGICHSDLHQLKNEWSN
SIYPMVPGHEVVGVVTEIGSKVEKFKIGDKVGVGCLVGSCRKCENCDNNLENYCRDQIMT
YNGVYTDGIPTYGGYSDIMVTNEHYVVHWPENLPMEAAPLLCAGITTYSPLRYFGLDKPG
MHIGVVGLGGLGHMAVKFAKAFGTKVTVISTSVSKKDEAIDRLGADSFLVSRDPDQMQGA
AGSLDGIIDTVSEIHPLLPLINLLKTHGKLVMVGAPEKPLELPVFPLLLGRKLVAGSAIG
GMKETQEMVDFAAKHSITPDVEVVPMDYVNKALERLLKSDVKYRFVLDIGNTLNKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400040518
Transcript Infomation

pacid=37466626 locus=PGSC0003DMG400015677 ID=PGSC0003DMT400040518.v4.03 annot-version=v4.03
Sequence

ATGGAAAAATCACATGAAAATGTTAAGGCATTTGGATGGGCAGCTAGAGATACTTCTGGG
GTACTTTCTCCTTTCAACTTCTCAAGAAGGGTGACTGGTGAAAAAGATGTGCAATTCAAA
GTTATGTATTGTGGAATTTGTCATTCTGATCTTCATCAACTCAAGAATGAATGGAGCAAT
AGTATATATCCAATGGTACCAGGGCATGAAGTTGTTGGTGTAGTAACTGAAATTGGTAGC
AAAGTTGAGAAATTCAAAATTGGAGACAAAGTTGGAGTTGGATGTTTAGTAGGATCATGT
AGAAAATGTGAAAATTGTGACAACAATCTTGAAAATTACTGTCGTGATCAGATCATGACA
TACAATGGTGTTTACACCGATGGAATCCCCACGTATGGTGGTTACTCCGATATAATGGTA
ACCAACGAGCACTATGTGGTCCATTGGCCCGAAAATTTACCAATGGAAGCAGCTCCCCTG
TTATGTGCAGGGATCACAACTTATAGTCCATTGAGATATTTTGGACTTGACAAGCCCGGA
ATGCACATTGGTGTTGTTGGTCTGGGTGGTTTGGGACATATGGCTGTGAAATTTGCTAAG
GCGTTTGGAACCAAAGTTACTGTGATAAGTACATCTGTTAGTAAGAAAGACGAAGCAATT
GATCGTTTAGGGGCAGACTCGTTTTTGGTCAGTCGTGATCCTGACCAAATGCAGGGTGCA
GCGGGGTCACTAGATGGCATCATCGATACCGTATCCGAAATTCATCCTCTTCTTCCATTG
ATTAATTTGTTGAAAACTCATGGGAAGCTTGTGATGGTTGGTGCCCCTGAAAAACCACTA
GAGTTACCTGTATTTCCCCTGCTTTTAGGAAGGAAGCTAGTGGCGGGGAGCGCGATAGGA
GGGATGAAGGAGACACAAGAGATGGTAGATTTCGCGGCAAAGCATAGCATAACACCAGAT
GTTGAAGTTGTGCCAATGGACTATGTGAATAAAGCGTTGGAACGCCTTTTGAAATCGGAT
GTGAAGTATCGTTTTGTGCTTGACATTGGCAACACATTAAACAAGAATTGA