Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040485
CDS Infomation

pacid=37465888 polypeptide=PGSC0003DMP400027464 locus=PGSC0003DMG400015673 ID=PGSC0003DMT400040485.v4.03 annot-version=v4.03
Sequence

ATGGCATTTTTAGCTACCATTTCTGGCCTTGACAGTCTGTTCCTTTCCAATACCCTAAAC
AATAACTTTACTTTCAGTAGAAAGCTCCCACCTAGTCAATCTTACAGTTTCCTTCACAAG
AAAATCAAGGCTAGCAATGTCGCGAACTCATTCCGAGCTTTTCAAGTCAAGGAACAAGAA
GTTTCATCCAAGGCAGAGAAATTCATCTTGCCTAAGTTTGAGTTTCAAGAATACATGGTA
ATGAAGGCAATCAAGGTAAACAAAGCACTAGATGAAGCAATACCAATGCAAGAGCCTATA
AAAATTCATGAAGCCATGAGGTACTCACTTCTAGCTGGAGGAAAACGTGTCCGGCCGATC
CTCTGCATGGCTTCTTGTGAAGTTGTAGGAGGGGATGAATCCTTAGCTATACCTGCAGCT
TGCGCGGTTGAGATGATCCATACCATGTCACTCGTCCATGATGATCTTCCTTGCATGGAC
AACGATGATCTACGTCGTGGCAAGCCCACGAACCATAAGGTTTTTGGGGAAAACACTGCA
GTTCTTGTAGGGGATGCACTTTTGTCTTTGGCCTTTGAACATGTGGCTACCAAGACTCAG
AATGTGACACCCCAAAGAGTGGTTCAAGCCATTGGGGAATTGGGTTCAGCCGTTGGCTCA
GAAGGGCTCGTGGCAGGGCAGATTGTGGACTTGGCGAGTGAGGGAAAACAAGTTAGCCTA
ACTGAACTGGAGTACATTCACCACCATAAGACGGCGAGGCTTTTGGAGGCTGCTGTGGTT
TGTGGGGCAATAATGGGGGGAGGAAATGAGGTTGATGTGGAGAGAATGAGGAGCTATGCT
AGGTGCATTGGACTGTTGTTTCAAGTGGTAGATGATATTCTTGATGTTACTAAGTCATCA
GATGAGTTGGGAAAGACAGCTGGTAAGGACCTAATAACAGATAAGGCTACATATCCTAAG
TTGATGGGGCTAGAAAAGGCTCGGCAATATGCCAGTGAGCTGATGGCTAAGGCCATGAAT
GAGCTAAGCTACTTTGATTCTGCCAAGGCAGCACCTCTTTATCATATTGCTAGTTATATT
GCAAATCGACAGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027464
PEP Infomation

pacid=37465888 transcript=PGSC0003DMT400040485 locus=PGSC0003DMG400015673 ID=PGSC0003DMT400040485.v4.03 annot-version=v4.03
Sequence

MAFLATISGLDSLFLSNTLNNNFTFSRKLPPSQSYSFLHKKIKASNVANSFRAFQVKEQE
VSSKAEKFILPKFEFQEYMVMKAIKVNKALDEAIPMQEPIKIHEAMRYSLLAGGKRVRPI
LCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTA
VLVGDALLSLAFEHVATKTQNVTPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSL
TELEYIHHHKTARLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSS
DELGKTAGKDLITDKATYPKLMGLEKARQYASELMAKAMNELSYFDSAKAAPLYHIASYI
ANRQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400040485
Transcript Infomation

pacid=37465888 locus=PGSC0003DMG400015673 ID=PGSC0003DMT400040485.v4.03 annot-version=v4.03
Sequence

ATGGCATTTTTAGCTACCATTTCTGGCCTTGACAGTCTGTTCCTTTCCAATACCCTAAAC
AATAACTTTACTTTCAGTAGAAAGCTCCCACCTAGTCAATCTTACAGTTTCCTTCACAAG
AAAATCAAGGCTAGCAATGTCGCGAACTCATTCCGAGCTTTTCAAGTCAAGGAACAAGAA
GTTTCATCCAAGGCAGAGAAATTCATCTTGCCTAAGTTTGAGTTTCAAGAATACATGGTA
ATGAAGGCAATCAAGGTAAACAAAGCACTAGATGAAGCAATACCAATGCAAGAGCCTATA
AAAATTCATGAAGCCATGAGGTACTCACTTCTAGCTGGAGGAAAACGTGTCCGGCCGATC
CTCTGCATGGCTTCTTGTGAAGTTGTAGGAGGGGATGAATCCTTAGCTATACCTGCAGCT
TGCGCGGTTGAGATGATCCATACCATGTCACTCGTCCATGATGATCTTCCTTGCATGGAC
AACGATGATCTACGTCGTGGCAAGCCCACGAACCATAAGGTTTTTGGGGAAAACACTGCA
GTTCTTGTAGGGGATGCACTTTTGTCTTTGGCCTTTGAACATGTGGCTACCAAGACTCAG
AATGTGACACCCCAAAGAGTGGTTCAAGCCATTGGGGAATTGGGTTCAGCCGTTGGCTCA
GAAGGGCTCGTGGCAGGGCAGATTGTGGACTTGGCGAGTGAGGGAAAACAAGTTAGCCTA
ACTGAACTGGAGTACATTCACCACCATAAGACGGCGAGGCTTTTGGAGGCTGCTGTGGTT
TGTGGGGCAATAATGGGGGGAGGAAATGAGGTTGATGTGGAGAGAATGAGGAGCTATGCT
AGGTGCATTGGACTGTTGTTTCAAGTGGTAGATGATATTCTTGATGTTACTAAGTCATCA
GATGAGTTGGGAAAGACAGCTGGTAAGGACCTAATAACAGATAAGGCTACATATCCTAAG
TTGATGGGGCTAGAAAAGGCTCGGCAATATGCCAGTGAGCTGATGGCTAAGGCCATGAAT
GAGCTAAGCTACTTTGATTCTGCCAAGGCAGCACCTCTTTATCATATTGCTAGTTATATT
GCAAATCGACAGAATTGA