Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040444
CDS Infomation

pacid=37450309 polypeptide=PGSC0003DMP400027438 locus=PGSC0003DMG400015657 ID=PGSC0003DMT400040444.v4.03 annot-version=v4.03
Sequence

ATGGGTAAGGCAGCAACCACCACAGCAGCGCCGACTGAAATGAAGAAGAAGAAGAAGAAA
GGCCGTCCTTCTCTTTCAGATCTCCATGAACGTGACAATAAACTTTCCATTTCTACCCCT
TCCCGTCGATCCAATCGCCGGAACCCTAATCCGAACTCGAATTCTCCGCCTCCGGACTTC
ATCGACGACGATGACGAAAGAAAAGAGAAGAAAGTCAAATTAGTTGTGCGTTTGCCTGAA
TCAAATCAACAACATTTCGAACAAGATTCGTCTTCTGCCAATTCACTTTCTGATTCCGAC
GGTGATAATCACGACGCGTCTGTTAATGTTAAGAGAAGGAAAATCGATTCCGTGGATCCC
AGATCTGATGACGTTGTTGCTGATCAGGAGGAAAAGCTTTCGAAAGCAACGGACACATCA
AATGGGTCGCCATTGGTGTCCGGCCCCACAACACCTTTGCCAGACAAAAAGTTGTTGGTG
TTCATACTTGACAGACTTCAAAAGAAGGACACTTATGGTGTATTCTCCGAGCCTGTTGAT
CATGATGAGATACCTGATTATCATGAGATTATACAGCATCCTATGGATTTTGGAACCGTG
AGGAAGAAACTTGATGGACGACTCTACTCAAACCTGGAGGAGTTAGAGGCTGATGTCTTC
TTAATATGTTCAAATGCAATGCAATATAATGCCTCAGATACTGTTTACTTTCGGCAGGCA
CGGTCTATTCAAGATCTGGCAAAAAGAGATTTTGATAATTTGAGGCATGAAGGGGAGGAT
GGTGAGCTGCAACCTAAGGTTGTTCGTAGAGGCCGGCCCCCAAGCAAAAATCTTAAGAAG
TCTGAAGAGAGTTCTCCACCCCCAAGCAAAAACCTAAAAATGTCTGTTGAGGGTTCACCT
ATTGATTGTATTGCTCCTGAGCTTTCTTCAGGCGCCACTCTTGCTAGTGGAGAGGAAAAA
GTCGGTGGATCTAATTCTTACAATCTAAGAAAGGGACCTATGCTTTATAAGTTCCGTTCT
GCTGATATATCCTCCACATATCGCTCTCGTGGTGAAACTTATTCTGAATGGTTGGTTGAT
TGGAATGAGTTTCCAGCTTCCATTTTGAGGGCTGATCTGAAGTATGGAAAGAAACATTTT
TCAGTTGATGAAAACAGGCGTGACACATACCAACTATTCCATCAGTCAGCTTCTTGTAGT
GAGCCATCTTTGTTGTGGAATGCTGATGACCTAAAGCGGTTAATGGCAGTTGGTGTTCAC
ATCGAGCAGCATGCATACGCTAGAAGCCTTGCCAGATTTGCTGCAGATCTTGGGCCAGTT
GTCTGGAAAGTAGCTTCTAAGAAGTTAGAAACTGTTTTACCTGCTGAAGTAAAGTTTGGT
CCTGGATGGGTAGGAGAAGGTGGAGGATCAACATTAATGTCAACTTTTTCATCTCAGAAC
AAATCATCAGATTGCTTGGCAGCTGATCACAATTCTTCTAGAGCCGTTATACCATCTCTT
CGGGGAGTAGGCTCTGCTGTCATGTGCAGGCCTAGTGATGGAAATGTTGAAGCTGGTAAG
ACTTTGAACAGCCAAAATGATGTAGCAGAGGCTAGTGGTGATTTTTCCTGTGCATTTCCT
GCATCTAACTCCCAGGCTAAGCAGAAACCTTCCGGCAACCCAAGAAATGGTTTCAGTGGT
ATGATTGGGTATGATTTGTCTGCGCAAATGGAGGTAAAAAGGCTGTCCATGCCTAAAGGG
GAACCGAGCCTACAAGAGGCCGCCTCAAGGCCTGGTGGTCAATTGCCTGGAACAGTTCCT
AAAAGAGATGTTTCATCCTCTCATCAGTCGCCTTCAAACCGTGTCTGCTCTCTGGAAAAC
AGTTTACGAGAAAGCTGGAGTAAATTGCATTCTGGGAATTTAGAGCAGACTTGGAGGGTT
TCTGGAGATTCTCAACCTGCCTCTGTATCTGCAGGGCAGTATAGGGTATCTCTTCCGAAT
CCGCCGGACCTGAATGTCAAAGTCCAAACTTCAAGCTCCCCTAGTTCTAGTTTACGAGTT
GGATCCCCACAGCAGCCAGATTTAGCATTGCAGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027438
PEP Infomation

pacid=37450309 transcript=PGSC0003DMT400040444 locus=PGSC0003DMG400015657 ID=PGSC0003DMT400040444.v4.03 annot-version=v4.03
Sequence

MGKAATTTAAPTEMKKKKKKGRPSLSDLHERDNKLSISTPSRRSNRRNPNPNSNSPPPDF
IDDDDERKEKKVKLVVRLPESNQQHFEQDSSSANSLSDSDGDNHDASVNVKRRKIDSVDP
RSDDVVADQEEKLSKATDTSNGSPLVSGPTTPLPDKKLLVFILDRLQKKDTYGVFSEPVD
HDEIPDYHEIIQHPMDFGTVRKKLDGRLYSNLEELEADVFLICSNAMQYNASDTVYFRQA
RSIQDLAKRDFDNLRHEGEDGELQPKVVRRGRPPSKNLKKSEESSPPPSKNLKMSVEGSP
IDCIAPELSSGATLASGEEKVGGSNSYNLRKGPMLYKFRSADISSTYRSRGETYSEWLVD
WNEFPASILRADLKYGKKHFSVDENRRDTYQLFHQSASCSEPSLLWNADDLKRLMAVGVH
IEQHAYARSLARFAADLGPVVWKVASKKLETVLPAEVKFGPGWVGEGGGSTLMSTFSSQN
KSSDCLAADHNSSRAVIPSLRGVGSAVMCRPSDGNVEAGKTLNSQNDVAEASGDFSCAFP
ASNSQAKQKPSGNPRNGFSGMIGYDLSAQMEVKRLSMPKGEPSLQEAASRPGGQLPGTVP
KRDVSSSHQSPSNRVCSLENSLRESWSKLHSGNLEQTWRVSGDSQPASVSAGQYRVSLPN
PPDLNVKVQTSSSPSSSLRVGSPQQPDLALQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400040444
Transcript Infomation

pacid=37450309 locus=PGSC0003DMG400015657 ID=PGSC0003DMT400040444.v4.03 annot-version=v4.03
Sequence

ATGGGTAAGGCAGCAACCACCACAGCAGCGCCGACTGAAATGAAGAAGAAGAAGAAGAAA
GGCCGTCCTTCTCTTTCAGATCTCCATGAACGTGACAATAAACTTTCCATTTCTACCCCT
TCCCGTCGATCCAATCGCCGGAACCCTAATCCGAACTCGAATTCTCCGCCTCCGGACTTC
ATCGACGACGATGACGAAAGAAAAGAGAAGAAAGTCAAATTAGTTGTGCGTTTGCCTGAA
TCAAATCAACAACATTTCGAACAAGATTCGTCTTCTGCCAATTCACTTTCTGATTCCGAC
GGTGATAATCACGACGCGTCTGTTAATGTTAAGAGAAGGAAAATCGATTCCGTGGATCCC
AGATCTGATGACGTTGTTGCTGATCAGGAGGAAAAGCTTTCGAAAGCAACGGACACATCA
AATGGGTCGCCATTGGTGTCCGGCCCCACAACACCTTTGCCAGACAAAAAGTTGTTGGTG
TTCATACTTGACAGACTTCAAAAGAAGGACACTTATGGTGTATTCTCCGAGCCTGTTGAT
CATGATGAGATACCTGATTATCATGAGATTATACAGCATCCTATGGATTTTGGAACCGTG
AGGAAGAAACTTGATGGACGACTCTACTCAAACCTGGAGGAGTTAGAGGCTGATGTCTTC
TTAATATGTTCAAATGCAATGCAATATAATGCCTCAGATACTGTTTACTTTCGGCAGGCA
CGGTCTATTCAAGATCTGGCAAAAAGAGATTTTGATAATTTGAGGCATGAAGGGGAGGAT
GGTGAGCTGCAACCTAAGGTTGTTCGTAGAGGCCGGCCCCCAAGCAAAAATCTTAAGAAG
TCTGAAGAGAGTTCTCCACCCCCAAGCAAAAACCTAAAAATGTCTGTTGAGGGTTCACCT
ATTGATTGTATTGCTCCTGAGCTTTCTTCAGGCGCCACTCTTGCTAGTGGAGAGGAAAAA
GTCGGTGGATCTAATTCTTACAATCTAAGAAAGGGACCTATGCTTTATAAGTTCCGTTCT
GCTGATATATCCTCCACATATCGCTCTCGTGGTGAAACTTATTCTGAATGGTTGGTTGAT
TGGAATGAGTTTCCAGCTTCCATTTTGAGGGCTGATCTGAAGTATGGAAAGAAACATTTT
TCAGTTGATGAAAACAGGCGTGACACATACCAACTATTCCATCAGTCAGCTTCTTGTAGT
GAGCCATCTTTGTTGTGGAATGCTGATGACCTAAAGCGGTTAATGGCAGTTGGTGTTCAC
ATCGAGCAGCATGCATACGCTAGAAGCCTTGCCAGATTTGCTGCAGATCTTGGGCCAGTT
GTCTGGAAAGTAGCTTCTAAGAAGTTAGAAACTGTTTTACCTGCTGAAGTAAAGTTTGGT
CCTGGATGGGTAGGAGAAGGTGGAGGATCAACATTAATGTCAACTTTTTCATCTCAGAAC
AAATCATCAGATTGCTTGGCAGCTGATCACAATTCTTCTAGAGCCGTTATACCATCTCTT
CGGGGAGTAGGCTCTGCTGTCATGTGCAGGCCTAGTGATGGAAATGTTGAAGCTGGTAAG
ACTTTGAACAGCCAAAATGATGTAGCAGAGGCTAGTGGTGATTTTTCCTGTGCATTTCCT
GCATCTAACTCCCAGGCTAAGCAGAAACCTTCCGGCAACCCAAGAAATGGTTTCAGTGGT
ATGATTGGGTATGATTTGTCTGCGCAAATGGAGGTAAAAAGGCTGTCCATGCCTAAAGGG
GAACCGAGCCTACAAGAGGCCGCCTCAAGGCCTGGTGGTCAATTGCCTGGAACAGTTCCT
AAAAGAGATGTTTCATCCTCTCATCAGTCGCCTTCAAACCGTGTCTGCTCTCTGGAAAAC
AGTTTACGAGAAAGCTGGAGTAAATTGCATTCTGGGAATTTAGAGCAGACTTGGAGGGTT
TCTGGAGATTCTCAACCTGCCTCTGTATCTGCAGGGCAGTATAGGGTATCTCTTCCGAAT
CCGCCGGACCTGAATGTCAAAGTCCAAACTTCAAGCTCCCCTAGTTCTAGTTTACGAGTT
GGATCCCCACAGCAGCCAGATTTAGCATTGCAGCTCTAA