Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040383
CDS Infomation

pacid=37434495 polypeptide=PGSC0003DMP400027393 locus=PGSC0003DMG400015636 ID=PGSC0003DMT400040383.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAGACAGTCTGAGATCAGCTGTGTACAGATCCTTTGTCACTTGTGATGATCCC
AAAGGTGTTGTGGAATGTACGACAATCAGAAAATCACAAATGGAAAAAAATGTGTATTGT
TCATCAGACAAGGAAAAAGGAAGAGAAACAGTCAGCAAAGATAATCACACATCTTCGTTC
CAGCTAATGGAGGTGTCCAGAGAAGCTCAAAATCTGAACCAAGTGATCCACTCATGGTCT
AACGGTATGACCATAGAAAGACATTCGAATGATATCATCGCTAAAGATTTGTTGAAAGGA
GCCCTTGATTTACAGGAATCACTTGTGATGCTAGGGAAGCTGCAACAAGCTTCACAACAT
ATGGCAAAGTTGAAGAAGAAGAAGCAGAAAGATAAGCCTCAACTTGATGGAATACCCATT
CAAAGAACCAAGTCTGAAAGGATTTCAGAACACAGGCTTGAGTTTCAAAAACCAAGATTT
TCTGTTGATGGGGATTGTTTTGATGAGCTTAGGGAAGTCATAAGAGATAACTTTGCTAGA
CAAAATCTGTTGCAACCAAATTGTGCTGCACAAAAGTCTCGGTTTCAAACAAGTGAAAAG
GCGTCTGTTGATACAAGGAAAATGATTATATCATCACATGTCCCATCCACTAGTTCAAGC
CAGTCCTCCATTGTTCAATCCCAACAAGTGACCGCTTTTGATTATTCCCTGCCGCAGGAG
AAGCCAGACGGGCCAAATTTAATTGCCAGACTGATGGGTCTTGAAGAAATTCCTAGAAAG
CCCCAGCACCAAACTACCCAGAAGCACTATGAGAAGGACAGGGTTGTCAAGCAGACCAGA
CCTATATTTGAAATAGATTTGCCAAAAGCAAAGAAGCCAACATTCATCAGTCAAAAGGTG
GATCCAAAAAGAAAAACATTGGATGAAATAATTGAAACCATGCATTTTAAGGGGCTTTTG
AGAAGCAAGTCTACACATAAATCTAATAGTGTTTCAGGTTTGCTAAATAAGTTTGTTGAT
TCTCCACCCATTGTGATCATGAAGCCTCTATATTCACAGAGTGAAATGTTTCCTGCCTGT
AACCATGAACAAAATCCATCAGGCTCTAGAAACAAATGGGAAGAAAGTTCATCTGATGAC
CAGAAGGGAGCATCGAATTTCACCATATATAGGAAAATGCAGACAGGAAAAGATCATAAT
AATAGATACAGCAAAGAAAAAGGGCGAGAGGATCATGGTGAAGCACCTTCAAAATCAAAG
ACTCTTCAAGTTTTGATTCAGCCTAAAACAAAGATTATAGCTTCTTCTCCTGGAAAGTAT
CGTGGTGAAGCAACTGCAAAATCAAAGACTTTTGATGTTCTGAGTCAAGAAAAACAGCCT
AATACAAAGATTAGAGCTTCTTCTCTGGGCAAGGATCTTGGTGAAGCACCTTCAAACTCA
AAGATGCTTAGAGTTCTTCTGCAAGAAAAACATCCTAATGCAAAGATCAAAGCTTCTTCT
CCTGGCAAGTATAGTGGTGAAGCAACTGCAAATTCAAAGACTGTTAAAGTTTTCATTCAG
GAAAAACAGCCTAATACAAGGACTAGAGCTTCTTCTCCTGGAAAGACCGGGAAACCAAAG
AAAGAAGCAATTGGAAAAACAGAGGACGGGACTCAACGAGTAGCTCCTGCTATCAGAAAC
TCTAAAGAAATGAAAAATGCCAAAATAGACGACAGTGCTAAATTTCAGGACCAAAGCAAG
ATGAGCACTGTGAAAGTGAGAAAACCAGAGAGAAAACCATTGGTTGCACAAGCAAAAAGT
ACTATATATGATCCTCAGCATATCACAACCACTGCATCTCATAACTCCATTAAGAGGAAG
AAGAATGTTAAAGCTGACAAGTCCATCAAGAGTACCCCCATTGCTACAGTTGACAACATA
GAACAGAAGGATGAAAGTATAGAAATGGTGCAGGCAGTAGATAAAGACACAGATATAGCC
ATATCCGAAGTTACATTCTCAGAAGAGCTTCAGTTAGAAAAAGGGGATAATATCTTTGAG
GATCTTGTCACCGATAATGCTGTCAATGGTGAAAGTGTCCCTTGTGAATCTAGCGTTCTA
TCAACCTATTGTCTCGGTGACATCAAATTAGTGGAGCAGATTAACTGTAACATCAATCTA
GACTTCACTGAGAATGAAAACTTAGACTCCGGAGCCACTACAAGGCATTTACTGTTGAGC
AGTGAATCGTTCCTCTGTCAGTGGGAGGAGCTTTTTGAAACAGATGTGTGGGAACCAACT
GTATGGCAGACAACTAGTGTAGATCATGAAATTGCTGATAGATCACTCTTACTTGATTGT
GCTAATGAGTTATTAGAAAATAAAAGGTCCCAATGTGCACTGGCAGTTAATCCGTTATCA
CTGAAGGCCATTAAGATGAGAAAATATTATGTATCCTTTGACAAGTTGATGAATGAAATT
TGTGATGGGATTGAAGTTCTGCGATGTTACAATAAGGTGGCTGGCAAGAACCTTTCAGCT
GATGCTCTTTATCCACTGCTAGAAAGAGATCTATGGTGCAAGGGGGTGGTCGGCAGTGCA
TGGGATCTGGCTTGGAGAACTGGATTAACTAACAATGAAGTTGAACAAGTGGTAACTGAC
ATTGAGAAGTATCTTTTAGCTGCATTTATCGATGATTTGTTGACCGACTTCATGCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400027393
PEP Infomation

pacid=37434495 transcript=PGSC0003DMT400040383 locus=PGSC0003DMG400015636 ID=PGSC0003DMT400040383.v4.03 annot-version=v4.03
Sequence

MPPDSLRSAVYRSFVTCDDPKGVVECTTIRKSQMEKNVYCSSDKEKGRETVSKDNHTSSF
QLMEVSREAQNLNQVIHSWSNGMTIERHSNDIIAKDLLKGALDLQESLVMLGKLQQASQH
MAKLKKKKQKDKPQLDGIPIQRTKSERISEHRLEFQKPRFSVDGDCFDELREVIRDNFAR
QNLLQPNCAAQKSRFQTSEKASVDTRKMIISSHVPSTSSSQSSIVQSQQVTAFDYSLPQE
KPDGPNLIARLMGLEEIPRKPQHQTTQKHYEKDRVVKQTRPIFEIDLPKAKKPTFISQKV
DPKRKTLDEIIETMHFKGLLRSKSTHKSNSVSGLLNKFVDSPPIVIMKPLYSQSEMFPAC
NHEQNPSGSRNKWEESSSDDQKGASNFTIYRKMQTGKDHNNRYSKEKGREDHGEAPSKSK
TLQVLIQPKTKIIASSPGKYRGEATAKSKTFDVLSQEKQPNTKIRASSLGKDLGEAPSNS
KMLRVLLQEKHPNAKIKASSPGKYSGEATANSKTVKVFIQEKQPNTRTRASSPGKTGKPK
KEAIGKTEDGTQRVAPAIRNSKEMKNAKIDDSAKFQDQSKMSTVKVRKPERKPLVAQAKS
TIYDPQHITTTASHNSIKRKKNVKADKSIKSTPIATVDNIEQKDESIEMVQAVDKDTDIA
ISEVTFSEELQLEKGDNIFEDLVTDNAVNGESVPCESSVLSTYCLGDIKLVEQINCNINL
DFTENENLDSGATTRHLLLSSESFLCQWEELFETDVWEPTVWQTTSVDHEIADRSLLLDC
ANELLENKRSQCALAVNPLSLKAIKMRKYYVSFDKLMNEICDGIEVLRCYNKVAGKNLSA
DALYPLLERDLWCKGVVGSAWDLAWRTGLTNNEVEQVVTDIEKYLLAAFIDDLLTDFML*

Transcript Sequence

Transcript ID

PGSC0003DMT400040383
Transcript Infomation

pacid=37434495 locus=PGSC0003DMG400015636 ID=PGSC0003DMT400040383.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAGACAGTCTGAGATCAGCTGTGTACAGATCCTTTGTCACTTGTGATGATCCC
AAAGGTGTTGTGGAATGTACGACAATCAGAAAATCACAAATGGAAAAAAATGTGTATTGT
TCATCAGACAAGGAAAAAGGAAGAGAAACAGTCAGCAAAGATAATCACACATCTTCGTTC
CAGCTAATGGAGGTGTCCAGAGAAGCTCAAAATCTGAACCAAGTGATCCACTCATGGTCT
AACGGTATGACCATAGAAAGACATTCGAATGATATCATCGCTAAAGATTTGTTGAAAGGA
GCCCTTGATTTACAGGAATCACTTGTGATGCTAGGGAAGCTGCAACAAGCTTCACAACAT
ATGGCAAAGTTGAAGAAGAAGAAGCAGAAAGATAAGCCTCAACTTGATGGAATACCCATT
CAAAGAACCAAGTCTGAAAGGATTTCAGAACACAGGCTTGAGTTTCAAAAACCAAGATTT
TCTGTTGATGGGGATTGTTTTGATGAGCTTAGGGAAGTCATAAGAGATAACTTTGCTAGA
CAAAATCTGTTGCAACCAAATTGTGCTGCACAAAAGTCTCGGTTTCAAACAAGTGAAAAG
GCGTCTGTTGATACAAGGAAAATGATTATATCATCACATGTCCCATCCACTAGTTCAAGC
CAGTCCTCCATTGTTCAATCCCAACAAGTGACCGCTTTTGATTATTCCCTGCCGCAGGAG
AAGCCAGACGGGCCAAATTTAATTGCCAGACTGATGGGTCTTGAAGAAATTCCTAGAAAG
CCCCAGCACCAAACTACCCAGAAGCACTATGAGAAGGACAGGGTTGTCAAGCAGACCAGA
CCTATATTTGAAATAGATTTGCCAAAAGCAAAGAAGCCAACATTCATCAGTCAAAAGGTG
GATCCAAAAAGAAAAACATTGGATGAAATAATTGAAACCATGCATTTTAAGGGGCTTTTG
AGAAGCAAGTCTACACATAAATCTAATAGTGTTTCAGGTTTGCTAAATAAGTTTGTTGAT
TCTCCACCCATTGTGATCATGAAGCCTCTATATTCACAGAGTGAAATGTTTCCTGCCTGT
AACCATGAACAAAATCCATCAGGCTCTAGAAACAAATGGGAAGAAAGTTCATCTGATGAC
CAGAAGGGAGCATCGAATTTCACCATATATAGGAAAATGCAGACAGGAAAAGATCATAAT
AATAGATACAGCAAAGAAAAAGGGCGAGAGGATCATGGTGAAGCACCTTCAAAATCAAAG
ACTCTTCAAGTTTTGATTCAGCCTAAAACAAAGATTATAGCTTCTTCTCCTGGAAAGTAT
CGTGGTGAAGCAACTGCAAAATCAAAGACTTTTGATGTTCTGAGTCAAGAAAAACAGCCT
AATACAAAGATTAGAGCTTCTTCTCTGGGCAAGGATCTTGGTGAAGCACCTTCAAACTCA
AAGATGCTTAGAGTTCTTCTGCAAGAAAAACATCCTAATGCAAAGATCAAAGCTTCTTCT
CCTGGCAAGTATAGTGGTGAAGCAACTGCAAATTCAAAGACTGTTAAAGTTTTCATTCAG
GAAAAACAGCCTAATACAAGGACTAGAGCTTCTTCTCCTGGAAAGACCGGGAAACCAAAG
AAAGAAGCAATTGGAAAAACAGAGGACGGGACTCAACGAGTAGCTCCTGCTATCAGAAAC
TCTAAAGAAATGAAAAATGCCAAAATAGACGACAGTGCTAAATTTCAGGACCAAAGCAAG
ATGAGCACTGTGAAAGTGAGAAAACCAGAGAGAAAACCATTGGTTGCACAAGCAAAAAGT
ACTATATATGATCCTCAGCATATCACAACCACTGCATCTCATAACTCCATTAAGAGGAAG
AAGAATGTTAAAGCTGACAAGTCCATCAAGAGTACCCCCATTGCTACAGTTGACAACATA
GAACAGAAGGATGAAAGTATAGAAATGGTGCAGGCAGTAGATAAAGACACAGATATAGCC
ATATCCGAAGTTACATTCTCAGAAGAGCTTCAGTTAGAAAAAGGGGATAATATCTTTGAG
GATCTTGTCACCGATAATGCTGTCAATGGTGAAAGTGTCCCTTGTGAATCTAGCGTTCTA
TCAACCTATTGTCTCGGTGACATCAAATTAGTGGAGCAGATTAACTGTAACATCAATCTA
GACTTCACTGAGAATGAAAACTTAGACTCCGGAGCCACTACAAGGCATTTACTGTTGAGC
AGTGAATCGTTCCTCTGTCAGTGGGAGGAGCTTTTTGAAACAGATGTGTGGGAACCAACT
GTATGGCAGACAACTAGTGTAGATCATGAAATTGCTGATAGATCACTCTTACTTGATTGT
GCTAATGAGTTATTAGAAAATAAAAGGTCCCAATGTGCACTGGCAGTTAATCCGTTATCA
CTGAAGGCCATTAAGATGAGAAAATATTATGTATCCTTTGACAAGTTGATGAATGAAATT
TGTGATGGGATTGAAGTTCTGCGATGTTACAATAAGGTGGCTGGCAAGAACCTTTCAGCT
GATGCTCTTTATCCACTGCTAGAAAGAGATCTATGGTGCAAGGGGGTGGTCGGCAGTGCA
TGGGATCTGGCTTGGAGAACTGGATTAACTAACAATGAAGTTGAACAAGTGGTAACTGAC
ATTGAGAAGTATCTTTTAGCTGCATTTATCGATGATTTGTTGACCGACTTCATGCTATAG