Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040359
CDS Infomation

pacid=37470352 polypeptide=PGSC0003DMP400027377 locus=PGSC0003DMG400015625 ID=PGSC0003DMT400040359.v4.03 annot-version=v4.03
Sequence

ATGTTGTGTAAAACGTCATTGCCATTTTGTCTTGTAACTGTTTTCTTCATTTTGTCTTGT
GTCACCCTTGCCCTGGCAGGATCTGACTTTGATTTTCCTTCCTTTCAAACTACATCCATT
TCAGGTGAAATTAGGAATGAAAATGATGTGTTGGTTTCATGGGGGACAAAAAGGTTGCTT
ACTGAAGATGAACCTCCATTGAACTCATCACTTATCTTGGCTGCTAAGAGAACATATAGA
AAAGATCCTCTTAACAATTTCAAAAGATATACTGGAGGCTGGAATATCAGTAACCGCCAT
TACTGGGCTTCTGTGGCTTTCACTGCAGCTCCATTCTTTGTCGTTGCGCTGATCTGGTTT
GTGATCTTCGCGCTGTGCTTGTTGTTCATCTGTCTCTGCTACTGTTGCTGTAGAAGAGTT
CCTTATGGCTACTCCCGAATAGCTTATGCTCTGTCCCTCATACTCCTCATACTTTTTACC
ATTACTGCAGTTGTTGGATGTATCATTTTGTACATTGGACAGGGAAAGTTTCACAGCAGT
ACAGTTAACACGTTGGATTATGTGGTTCATCAGGCAAATACCACCGCTGACAGTCTCAGA
AACGTCTCAGGTTATCTTGCTGCAGCCAAACTTATTGCTGTGGATCAAGTTTTGCTTCCT
GGATCAGTCCAAACAGACATAGACCGCATCCAAACCAAAATTAATTCTTCTGCTAATACC
CTTGCCAGTAAAACAGAAGACAATAAAGATGACATAGCTGGTTTGGTAGAGTCTGTGAGA
TTGGCTCTTATTATTCTATCAGCCATCATGCTTCTTTTGACATTTCTGGGATTTGTACTT
TCAATTTTCGGGATGCAGGCTTTCGTTTATATCTTGGTGATATTTGGATGGATTCTTGTC
ACCGGGACTTTAATTTTGTGTGGCATATTTCTTGTTCTCCACAATGTGACTGCAGACACT
TGTGTAGCAATGAATCAATGGGTCCAACACCCTCTTGCTCATACTGCTTTAGATGATATC
TTGCCGTGTGTGGACAATGCCACTGCACAAGAGACCCTTACAAAAAGCAAAGAAGTCACT
TCTAAGCTGGTCGATGTTGTTAACCAGGTCATTACTAATATTTCCAATAACAACTTCTCC
CCCAGCTTTCGTCCTTTGTACTACAATCAGTCTGGACCAAAACTGCCAATCCTTTGCAAT
CCGTTTTACTCGGATTTGACTGATAGATCCTGTAGCCCTGGTGAAGTGGACTTGAGCAAT
GCTACAAAGGTATGGGATAATTATGTCTGTCAAGTTTCCCCTAGTGGCACTTGTTCCACA
ACTGGCCGTCTGACTCCGGTCATCTACGGCCAGATGGCAGCTGCTGTAAATGTGAGCTTT
GGATTGTACCATTATGGTCCTTTCCTGGTTGATCTAGAAGATTGTGATTTTGTTAGACAA
ACATTTGGAGATATATATAGCATATACTGCCCCGGACTTCAGCGTTATAGCAAATGGGTT
TACATTGGACTGGTGATGGTTGGTTTAGCAGTATTGCTTTCCCTTACATTCTGGGTCATA
TATGGGAGAGAAAGGCGACACCGCGTGTATACAAAAGAACACATGCCCAAACCAGCTGAA
GGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027377
PEP Infomation

pacid=37470352 transcript=PGSC0003DMT400040359 locus=PGSC0003DMG400015625 ID=PGSC0003DMT400040359.v4.03 annot-version=v4.03
Sequence

MLCKTSLPFCLVTVFFILSCVTLALAGSDFDFPSFQTTSISGEIRNENDVLVSWGTKRLL
TEDEPPLNSSLILAAKRTYRKDPLNNFKRYTGGWNISNRHYWASVAFTAAPFFVVALIWF
VIFALCLLFICLCYCCCRRVPYGYSRIAYALSLILLILFTITAVVGCIILYIGQGKFHSS
TVNTLDYVVHQANTTADSLRNVSGYLAAAKLIAVDQVLLPGSVQTDIDRIQTKINSSANT
LASKTEDNKDDIAGLVESVRLALIILSAIMLLLTFLGFVLSIFGMQAFVYILVIFGWILV
TGTLILCGIFLVLHNVTADTCVAMNQWVQHPLAHTALDDILPCVDNATAQETLTKSKEVT
SKLVDVVNQVITNISNNNFSPSFRPLYYNQSGPKLPILCNPFYSDLTDRSCSPGEVDLSN
ATKVWDNYVCQVSPSGTCSTTGRLTPVIYGQMAAAVNVSFGLYHYGPFLVDLEDCDFVRQ
TFGDIYSIYCPGLQRYSKWVYIGLVMVGLAVLLSLTFWVIYGRERRHRVYTKEHMPKPAE
G*

Transcript Sequence

Transcript ID

PGSC0003DMT400040359
Transcript Infomation

pacid=37470352 locus=PGSC0003DMG400015625 ID=PGSC0003DMT400040359.v4.03 annot-version=v4.03
Sequence

ATGTTGTGTAAAACGTCATTGCCATTTTGTCTTGTAACTGTTTTCTTCATTTTGTCTTGT
GTCACCCTTGCCCTGGCAGGATCTGACTTTGATTTTCCTTCCTTTCAAACTACATCCATT
TCAGGTGAAATTAGGAATGAAAATGATGTGTTGGTTTCATGGGGGACAAAAAGGTTGCTT
ACTGAAGATGAACCTCCATTGAACTCATCACTTATCTTGGCTGCTAAGAGAACATATAGA
AAAGATCCTCTTAACAATTTCAAAAGATATACTGGAGGCTGGAATATCAGTAACCGCCAT
TACTGGGCTTCTGTGGCTTTCACTGCAGCTCCATTCTTTGTCGTTGCGCTGATCTGGTTT
GTGATCTTCGCGCTGTGCTTGTTGTTCATCTGTCTCTGCTACTGTTGCTGTAGAAGAGTT
CCTTATGGCTACTCCCGAATAGCTTATGCTCTGTCCCTCATACTCCTCATACTTTTTACC
ATTACTGCAGTTGTTGGATGTATCATTTTGTACATTGGACAGGGAAAGTTTCACAGCAGT
ACAGTTAACACGTTGGATTATGTGGTTCATCAGGCAAATACCACCGCTGACAGTCTCAGA
AACGTCTCAGGTTATCTTGCTGCAGCCAAACTTATTGCTGTGGATCAAGTTTTGCTTCCT
GGATCAGTCCAAACAGACATAGACCGCATCCAAACCAAAATTAATTCTTCTGCTAATACC
CTTGCCAGTAAAACAGAAGACAATAAAGATGACATAGCTGGTTTGGTAGAGTCTGTGAGA
TTGGCTCTTATTATTCTATCAGCCATCATGCTTCTTTTGACATTTCTGGGATTTGTACTT
TCAATTTTCGGGATGCAGGCTTTCGTTTATATCTTGGTGATATTTGGATGGATTCTTGTC
ACCGGGACTTTAATTTTGTGTGGCATATTTCTTGTTCTCCACAATGTGACTGCAGACACT
TGTGTAGCAATGAATCAATGGGTCCAACACCCTCTTGCTCATACTGCTTTAGATGATATC
TTGCCGTGTGTGGACAATGCCACTGCACAAGAGACCCTTACAAAAAGCAAAGAAGTCACT
TCTAAGCTGGTCGATGTTGTTAACCAGGTCATTACTAATATTTCCAATAACAACTTCTCC
CCCAGCTTTCGTCCTTTGTACTACAATCAGTCTGGACCAAAACTGCCAATCCTTTGCAAT
CCGTTTTACTCGGATTTGACTGATAGATCCTGTAGCCCTGGTGAAGTGGACTTGAGCAAT
GCTACAAAGGTATGGGATAATTATGTCTGTCAAGTTTCCCCTAGTGGCACTTGTTCCACA
ACTGGCCGTCTGACTCCGGTCATCTACGGCCAGATGGCAGCTGCTGTAAATGTGAGCTTT
GGATTGTACCATTATGGTCCTTTCCTGGTTGATCTAGAAGATTGTGATTTTGTTAGACAA
ACATTTGGAGATATATATAGCATATACTGCCCCGGACTTCAGCGTTATAGCAAATGGGTT
TACATTGGACTGGTGATGGTTGGTTTAGCAGTATTGCTTTCCCTTACATTCTGGGTCATA
TATGGGAGAGAAAGGCGACACCGCGTGTATACAAAAGAACACATGCCCAAACCAGCTGAA
GGGTAA