Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040304
CDS Infomation

pacid=37444296 polypeptide=PGSC0003DMP400027341 locus=PGSC0003DMG400015604 ID=PGSC0003DMT400040304.v4.03 annot-version=v4.03
Sequence

ATGATTGGAAATATAATCAAGAGTTTTATGTGTAAAAGGAATTTGGCACCGATTCTCCAT
GATAAGGAACGTAATGGCTTTAGATCTTATATCAATGAAGCTGATTTGCCTCCATCAAAG
CGGAAGAGGTTGGAAAATCTCCCTGTTTGCAGCAAGAAGAATAAAACAGAGATAAGTAAC
GAGATCACTTCGTCTGCAAGAAACGATTTAACTGATCGAAAGAGGCTGGGTATTTCATTG
ACGGACTATTTCTCTATTGAGCAATTGAAGGATCATATACATAATCTCAGTCAATATAAT
CAGGGATCAACTGGAAATACGACAGTACGTTCTGTCTCTGAGAATGTAAATGTCTGTCAA
TTATGTGGCATCGATAAGCCTGTTTTTGTCCCGACACCTATATATTGTTCATCATGTTGT
AAGTGTATCAAACGCAACTTGATTTATTATTGGGCTGTGGATGAAGCTGATGGACGGCAC
TGCTTTTGTACGAAATGTTTCAGGAAGTGTTGTGGCGATGATAATGTCTCATCCCAAGGA
CTATCAATTAGCAAAAATAAGTTTCAAAAGGCTAAGAATAATGATCGAAATGAAGAACCG
TGGGTACAATGTGATAAGTGTGAATGCTGGCAACATCAAATATGTGCACTCTATAATGCT
AAAAAAGATTTAGAAGGACAAGCAAAGTACATATGTCCATTTTGTCGTTTAAAGGAAATC
GAAGCAGGAGAGCATGTGTCTTTACCAGTTTCTATCGGAGCTCAAGATCTTCCAAGAACT
ATGCTTAGTGATCACATTGAGCAGAGACTGTTCACGCGCCTCGAGCTAGAAAGAAACGAG
AGAGCAAAATTGTCAGGACATGATGCCAACGAGGTACCTGGTGCAGCAGATCTAATTGTC
AGAGTGGTATTGTCTGTTAACAGAAATTTGAGAGTAAATCAACAATTTTTGGATATTTTT
CACAATGAAGATTATCCTCCAGAGTTTCAGTACAAATCAAAGGTGATTCTATTATTCCAG
AAAATTGGAGGAGTAGATGTTTGCCTCTTCGGAATGTATGTCCAAGAATTTGGATCAGAA
TGTGCCCCTCCAAATAGACGTTGCGTCTATATATCATATCTCGATTCTATCAACTACTTT
AAACCTGATATACAAACTGTAAAAGGGGAAGCTCTACGAACTTTTGTTTACCATGAAATA
CTGATTGGATACATGGATTACTGCAAGAAACGAGGTTTTACAACCTGCTATTTATGGGCT
TGCCCCTCTATAAAAGGCGAAGACTACATCTTGTATTGCCATCCTAAATCTCAGAAAACA
CCGAAACCAGAGAAGCTCCGGTTGTGGTATAAGTCAATGTTAAGGAAAGCATCTGAAGAG
GATATCGTAGTAAACTATACTAATTTATATGATCACTTTTTTGCGCCGAGTATAAGGAAT
AGTGCTGCTCATTTGCCATATTTCGATGGAGACTATTGGTCAGGCGCTGCAGAAGAAATA
ATTAGGAACATTGAGACAGAGAATAGAGGTGATAAAGTTAAAAAGTTAATGACAAAGAGT
ACGTTAAAAGCAATTGGACATGACAATGTTTATGCAGATGCAACTAAAGATATTCTAGTG
ATGCAAAAGTTAGGGCAAACAATCTTACCTGTGAAAGAAGAATTCATCATTGTAAATTTA
CATGTTGTGTGCACAAACTGCCAACAAGCAATATTATCAGAAGTTCGATGGTCTTGTAAG
CAATGCAAAAACTTTCATATTTGTGCGAAGTGTCTCATGTTGCAGAAAACACACACTTCT
AGTAATGGAGAAGAACATTTACTTTCTGAGGTTGTGATGGACGAGGACGATATACCTGCT
AGCACTGAGGACCAGGATGCCACTATTGAAAATGATATTTTCGAGAATAGGCATTCTTTT
TTAAGCTTCTGTGAGAAAAATCACTATCAATTTGATTCACTTCGTCGCGCCAAGCATTCC
TCAATGATGATATTGTATCATCTCTACAATAACATTCGCCTGTCCAGAACTGACTCTGGC
TTCGAAAAGGAGCAATTCGAGGGTCAGGGACCATTGAAGGTCAAATTAATGGGTGTACTG
GTGCATGCATCACAATGCCGTGCAACCCTAAGCAATCCCTGCTCGTTCTCAGGATGCCTC
AAAATTAGGGAACTTTTTCAACATGTAAGCCGGTGCAGTGTTAGAGTTGCAGGGGGGTGC
GCACTTTGTAGCAAAATTTGGTCCTTACTGCATTGGCATTCACAGACATGTCAAGATACC
AGTTGCCTAGTTCTCCGTTGCAAGGACATTAAAAAGCATGGCGTGGCTACACTTAGGTCA
GGGTTTCCAATTGGACATCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027341
PEP Infomation

pacid=37444296 transcript=PGSC0003DMT400040304 locus=PGSC0003DMG400015604 ID=PGSC0003DMT400040304.v4.03 annot-version=v4.03
Sequence

MIGNIIKSFMCKRNLAPILHDKERNGFRSYINEADLPPSKRKRLENLPVCSKKNKTEISN
EITSSARNDLTDRKRLGISLTDYFSIEQLKDHIHNLSQYNQGSTGNTTVRSVSENVNVCQ
LCGIDKPVFVPTPIYCSSCCKCIKRNLIYYWAVDEADGRHCFCTKCFRKCCGDDNVSSQG
LSISKNKFQKAKNNDRNEEPWVQCDKCECWQHQICALYNAKKDLEGQAKYICPFCRLKEI
EAGEHVSLPVSIGAQDLPRTMLSDHIEQRLFTRLELERNERAKLSGHDANEVPGAADLIV
RVVLSVNRNLRVNQQFLDIFHNEDYPPEFQYKSKVILLFQKIGGVDVCLFGMYVQEFGSE
CAPPNRRCVYISYLDSINYFKPDIQTVKGEALRTFVYHEILIGYMDYCKKRGFTTCYLWA
CPSIKGEDYILYCHPKSQKTPKPEKLRLWYKSMLRKASEEDIVVNYTNLYDHFFAPSIRN
SAAHLPYFDGDYWSGAAEEIIRNIETENRGDKVKKLMTKSTLKAIGHDNVYADATKDILV
MQKLGQTILPVKEEFIIVNLHVVCTNCQQAILSEVRWSCKQCKNFHICAKCLMLQKTHTS
SNGEEHLLSEVVMDEDDIPASTEDQDATIENDIFENRHSFLSFCEKNHYQFDSLRRAKHS
SMMILYHLYNNIRLSRTDSGFEKEQFEGQGPLKVKLMGVLVHASQCRATLSNPCSFSGCL
KIRELFQHVSRCSVRVAGGCALCSKIWSLLHWHSQTCQDTSCLVLRCKDIKKHGVATLRS
GFPIGHP*

Transcript Sequence

Transcript ID

PGSC0003DMT400040304
Transcript Infomation

pacid=37444296 locus=PGSC0003DMG400015604 ID=PGSC0003DMT400040304.v4.03 annot-version=v4.03
Sequence

ATGATTGGAAATATAATCAAGAGTTTTATGTGTAAAAGGAATTTGGCACCGATTCTCCAT
GATAAGGAACGTAATGGCTTTAGATCTTATATCAATGAAGCTGATTTGCCTCCATCAAAG
CGGAAGAGGTTGGAAAATCTCCCTGTTTGCAGCAAGAAGAATAAAACAGAGATAAGTAAC
GAGATCACTTCGTCTGCAAGAAACGATTTAACTGATCGAAAGAGGCTGGGTATTTCATTG
ACGGACTATTTCTCTATTGAGCAATTGAAGGATCATATACATAATCTCAGTCAATATAAT
CAGGGATCAACTGGAAATACGACAGTACGTTCTGTCTCTGAGAATGTAAATGTCTGTCAA
TTATGTGGCATCGATAAGCCTGTTTTTGTCCCGACACCTATATATTGTTCATCATGTTGT
AAGTGTATCAAACGCAACTTGATTTATTATTGGGCTGTGGATGAAGCTGATGGACGGCAC
TGCTTTTGTACGAAATGTTTCAGGAAGTGTTGTGGCGATGATAATGTCTCATCCCAAGGA
CTATCAATTAGCAAAAATAAGTTTCAAAAGGCTAAGAATAATGATCGAAATGAAGAACCG
TGGGTACAATGTGATAAGTGTGAATGCTGGCAACATCAAATATGTGCACTCTATAATGCT
AAAAAAGATTTAGAAGGACAAGCAAAGTACATATGTCCATTTTGTCGTTTAAAGGAAATC
GAAGCAGGAGAGCATGTGTCTTTACCAGTTTCTATCGGAGCTCAAGATCTTCCAAGAACT
ATGCTTAGTGATCACATTGAGCAGAGACTGTTCACGCGCCTCGAGCTAGAAAGAAACGAG
AGAGCAAAATTGTCAGGACATGATGCCAACGAGGTACCTGGTGCAGCAGATCTAATTGTC
AGAGTGGTATTGTCTGTTAACAGAAATTTGAGAGTAAATCAACAATTTTTGGATATTTTT
CACAATGAAGATTATCCTCCAGAGTTTCAGTACAAATCAAAGGTGATTCTATTATTCCAG
AAAATTGGAGGAGTAGATGTTTGCCTCTTCGGAATGTATGTCCAAGAATTTGGATCAGAA
TGTGCCCCTCCAAATAGACGTTGCGTCTATATATCATATCTCGATTCTATCAACTACTTT
AAACCTGATATACAAACTGTAAAAGGGGAAGCTCTACGAACTTTTGTTTACCATGAAATA
CTGATTGGATACATGGATTACTGCAAGAAACGAGGTTTTACAACCTGCTATTTATGGGCT
TGCCCCTCTATAAAAGGCGAAGACTACATCTTGTATTGCCATCCTAAATCTCAGAAAACA
CCGAAACCAGAGAAGCTCCGGTTGTGGTATAAGTCAATGTTAAGGAAAGCATCTGAAGAG
GATATCGTAGTAAACTATACTAATTTATATGATCACTTTTTTGCGCCGAGTATAAGGAAT
AGTGCTGCTCATTTGCCATATTTCGATGGAGACTATTGGTCAGGCGCTGCAGAAGAAATA
ATTAGGAACATTGAGACAGAGAATAGAGGTGATAAAGTTAAAAAGTTAATGACAAAGAGT
ACGTTAAAAGCAATTGGACATGACAATGTTTATGCAGATGCAACTAAAGATATTCTAGTG
ATGCAAAAGTTAGGGCAAACAATCTTACCTGTGAAAGAAGAATTCATCATTGTAAATTTA
CATGTTGTGTGCACAAACTGCCAACAAGCAATATTATCAGAAGTTCGATGGTCTTGTAAG
CAATGCAAAAACTTTCATATTTGTGCGAAGTGTCTCATGTTGCAGAAAACACACACTTCT
AGTAATGGAGAAGAACATTTACTTTCTGAGGTTGTGATGGACGAGGACGATATACCTGCT
AGCACTGAGGACCAGGATGCCACTATTGAAAATGATATTTTCGAGAATAGGCATTCTTTT
TTAAGCTTCTGTGAGAAAAATCACTATCAATTTGATTCACTTCGTCGCGCCAAGCATTCC
TCAATGATGATATTGTATCATCTCTACAATAACATTCGCCTGTCCAGAACTGACTCTGGC
TTCGAAAAGGAGCAATTCGAGGGTCAGGGACCATTGAAGGTCAAATTAATGGGTGTACTG
GTGCATGCATCACAATGCCGTGCAACCCTAAGCAATCCCTGCTCGTTCTCAGGATGCCTC
AAAATTAGGGAACTTTTTCAACATGTAAGCCGGTGCAGTGTTAGAGTTGCAGGGGGGTGC
GCACTTTGTAGCAAAATTTGGTCCTTACTGCATTGGCATTCACAGACATGTCAAGATACC
AGTTGCCTAGTTCTCCGTTGCAAGGACATTAAAAAGCATGGCGTGGCTACACTTAGGTCA
GGGTTTCCAATTGGACATCCTTAG