Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040260
CDS Infomation

pacid=37445455 polypeptide=PGSC0003DMP400027313 locus=PGSC0003DMG400015584 ID=PGSC0003DMT400040260.v4.03 annot-version=v4.03
Sequence

ATGGCATTACCACTTCTCTCAATTTTCCTTTTTTCATCTCTAACCTTATTTTCTCTTACA
GAATCCAAACTCAATGTTGACTATTACAATAAAACATGTCCTCAATTTGAAAAAATCATC
CAACAAATCGTCGTCGATAAGCAACTCGCGGCCCCCACCACCGCGGCTGGGGCCCTCCGC
CTCTTCTTCCACGATTGCATGGTGGGAGGATGTGACGCGTCGTTATTGATTTCCTCAAAT
TCCTTTTCCCAAGCCGAGCGTGACACGGATATCAACCTCTCCCTCCCGGGGGACGCTTAT
GATGTTGTCACACGTGCAAAGACCGCATTAGAACTCCAATGCCCTGGCATTGTATCTTGT
GCAGATATTTTAGCTGTTGCAACTCGTGACTTGATTACAATGGTTGGAGGTCCATTTTAC
AAAATTCGCCTAGGGCGAAAAGATAGCTTTGAATCGTACGCAAAAGATGTTGAAGGACAT
ATTGCTAGGCCTAACATGACTATGGACACAATAATTAATATGTTTGCATCAAAAAAATTA
AATGTACAAGAAATGGTGGCATTAATGGGTGCACATACAATTGGATTTTCTCATTGTTCG
GAATTTAGCAAGAGATTATTCAAATTTAGTCAGACGTCAGAATTTGATCCTACTATGAAC
CCTACATATGTTCAAGCGTTGCAAACCTTGTGTGGGAATAACACGAAGGATATGGCTGCG
TTCAATGACGTGATGACACCTGGCAAATTCGACAACATGTATTTCATAAACTTGCAAAAG
GGGCTAGGGTTATTGGCATCTGATCAAGCTATGATTTATGAACAAAGGACAAAGCCATTT
GTGGAGCTTTATGCAAAGGATCAAGATGCATTTTTCAAGGCATTTGCACATGCAATGGAG
AAAGTGAGTGTTTATAAAGTTAAATTAGGGAAAATGGGAGAGGTGAGACGTAGATGTGAT
GTTGTGAATCAATTACAAGTAAATCCAAACAAGAAAATTGGTAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027313
PEP Infomation

pacid=37445455 transcript=PGSC0003DMT400040260 locus=PGSC0003DMG400015584 ID=PGSC0003DMT400040260.v4.03 annot-version=v4.03
Sequence

MALPLLSIFLFSSLTLFSLTESKLNVDYYNKTCPQFEKIIQQIVVDKQLAAPTTAAGALR
LFFHDCMVGGCDASLLISSNSFSQAERDTDINLSLPGDAYDVVTRAKTALELQCPGIVSC
ADILAVATRDLITMVGGPFYKIRLGRKDSFESYAKDVEGHIARPNMTMDTIINMFASKKL
NVQEMVALMGAHTIGFSHCSEFSKRLFKFSQTSEFDPTMNPTYVQALQTLCGNNTKDMAA
FNDVMTPGKFDNMYFINLQKGLGLLASDQAMIYEQRTKPFVELYAKDQDAFFKAFAHAME
KVSVYKVKLGKMGEVRRRCDVVNQLQVNPNKKIGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400040260
Transcript Infomation

pacid=37445455 locus=PGSC0003DMG400015584 ID=PGSC0003DMT400040260.v4.03 annot-version=v4.03
Sequence

ATGGCATTACCACTTCTCTCAATTTTCCTTTTTTCATCTCTAACCTTATTTTCTCTTACA
GAATCCAAACTCAATGTTGACTATTACAATAAAACATGTCCTCAATTTGAAAAAATCATC
CAACAAATCGTCGTCGATAAGCAACTCGCGGCCCCCACCACCGCGGCTGGGGCCCTCCGC
CTCTTCTTCCACGATTGCATGGTGGGAGGATGTGACGCGTCGTTATTGATTTCCTCAAAT
TCCTTTTCCCAAGCCGAGCGTGACACGGATATCAACCTCTCCCTCCCGGGGGACGCTTAT
GATGTTGTCACACGTGCAAAGACCGCATTAGAACTCCAATGCCCTGGCATTGTATCTTGT
GCAGATATTTTAGCTGTTGCAACTCGTGACTTGATTACAATGGTTGGAGGTCCATTTTAC
AAAATTCGCCTAGGGCGAAAAGATAGCTTTGAATCGTACGCAAAAGATGTTGAAGGACAT
ATTGCTAGGCCTAACATGACTATGGACACAATAATTAATATGTTTGCATCAAAAAAATTA
AATGTACAAGAAATGGTGGCATTAATGGGTGCACATACAATTGGATTTTCTCATTGTTCG
GAATTTAGCAAGAGATTATTCAAATTTAGTCAGACGTCAGAATTTGATCCTACTATGAAC
CCTACATATGTTCAAGCGTTGCAAACCTTGTGTGGGAATAACACGAAGGATATGGCTGCG
TTCAATGACGTGATGACACCTGGCAAATTCGACAACATGTATTTCATAAACTTGCAAAAG
GGGCTAGGGTTATTGGCATCTGATCAAGCTATGATTTATGAACAAAGGACAAAGCCATTT
GTGGAGCTTTATGCAAAGGATCAAGATGCATTTTTCAAGGCATTTGCACATGCAATGGAG
AAAGTGAGTGTTTATAAAGTTAAATTAGGGAAAATGGGAGAGGTGAGACGTAGATGTGAT
GTTGTGAATCAATTACAAGTAAATCCAAACAAGAAAATTGGTAGTTAA