Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040240
CDS Infomation

pacid=37444903 polypeptide=PGSC0003DMP400027300 locus=PGSC0003DMG400015576 ID=PGSC0003DMT400040240.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAGAGAGAGATGGTTTCTTTGTTGTTAGGAAAGGAGATCTGGTTGGAGTCTAC
AAAAACTTGAGTGATTGCCAGACCCAAGTTGGATCATCGATATGTGATCCTCCTGTTAGT
GTGTACAAAGGCTATGCCATGCCTAAGGACACAGAAGAATATCTTCTTTCTTGTGGGCTT
AAAAATGCTCTCTATTCTATCAGAGCTGCAGATCTTACCGAAGATCTCTTTGGGACCCTA
GTACCATGCCCTTTTCAGCAACCTTCTTCTTCAAAAAGTGGAACATCTGATCATTTGCCA
AAGAAGAGGCCACAGGAAGCAGTGTGGTCAGAATATGCGGATGCTGTTGGATCAACGGTT
GTTTCAAATGATTCCGCAAGAAAGCATGTCAAGTTAGAACAACAAAAGGGCGACCAAGTT
CTAGCTCTACCATCTGGTCGGTCATGTACTCTTGAATTCGATGGTGCTTCAAAGGGAAAT
CCTGGACAAGCTGGTGCGGGAGCTGTTATACGGGCGGATGATGGAAGCATGACCCTCAGG
CTACGTGAAGGTTTAGGAGTGGCAACAAGCAATCATGCTGAATACAGGGCCTTTATTTTG
GGTTTGAAACATGCTCTTAGAGAAGGGTTTACAAGCATTCGTGTTCAAGGTGACTCCAAG
CTTGTTTGTATGCAGATCCAAGGTCTGTGGAAGGTTAAAAATCAAAACATTGCCGTGGTG
TTTGAGCAGGCAAAACAATTGAAGGAAAGGTTCCTTTCTTTCCGCATCATTCATGTCCTT
CGGGAATCAAACTCTGATGCAGATCAGCAAGCAAACTTGGCTGTTGAACTTCCTGAGGGT
CAAATTCAAGAGGAGTTACAGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027300
PEP Infomation

pacid=37444903 transcript=PGSC0003DMT400040240 locus=PGSC0003DMG400015576 ID=PGSC0003DMT400040240.v4.03 annot-version=v4.03
Sequence

MKEERDGFFVVRKGDLVGVYKNLSDCQTQVGSSICDPPVSVYKGYAMPKDTEEYLLSCGL
KNALYSIRAADLTEDLFGTLVPCPFQQPSSSKSGTSDHLPKKRPQEAVWSEYADAVGSTV
VSNDSARKHVKLEQQKGDQVLALPSGRSCTLEFDGASKGNPGQAGAGAVIRADDGSMTLR
LREGLGVATSNHAEYRAFILGLKHALREGFTSIRVQGDSKLVCMQIQGLWKVKNQNIAVV
FEQAKQLKERFLSFRIIHVLRESNSDADQQANLAVELPEGQIQEELQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400040240
Transcript Infomation

pacid=37444903 locus=PGSC0003DMG400015576 ID=PGSC0003DMT400040240.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAGAGAGAGATGGTTTCTTTGTTGTTAGGAAAGGAGATCTGGTTGGAGTCTAC
AAAAACTTGAGTGATTGCCAGACCCAAGTTGGATCATCGATATGTGATCCTCCTGTTAGT
GTGTACAAAGGCTATGCCATGCCTAAGGACACAGAAGAATATCTTCTTTCTTGTGGGCTT
AAAAATGCTCTCTATTCTATCAGAGCTGCAGATCTTACCGAAGATCTCTTTGGGACCCTA
GTACCATGCCCTTTTCAGCAACCTTCTTCTTCAAAAAGTGGAACATCTGATCATTTGCCA
AAGAAGAGGCCACAGGAAGCAGTGTGGTCAGAATATGCGGATGCTGTTGGATCAACGGTT
GTTTCAAATGATTCCGCAAGAAAGCATGTCAAGTTAGAACAACAAAAGGGCGACCAAGTT
CTAGCTCTACCATCTGGTCGGTCATGTACTCTTGAATTCGATGGTGCTTCAAAGGGAAAT
CCTGGACAAGCTGGTGCGGGAGCTGTTATACGGGCGGATGATGGAAGCATGACCCTCAGG
CTACGTGAAGGTTTAGGAGTGGCAACAAGCAATCATGCTGAATACAGGGCCTTTATTTTG
GGTTTGAAACATGCTCTTAGAGAAGGGTTTACAAGCATTCGTGTTCAAGGTGACTCCAAG
CTTGTTTGTATGCAGATCCAAGGTCTGTGGAAGGTTAAAAATCAAAACATTGCCGTGGTG
TTTGAGCAGGCAAAACAATTGAAGGAAAGGTTCCTTTCTTTCCGCATCATTCATGTCCTT
CGGGAATCAAACTCTGATGCAGATCAGCAAGCAAACTTGGCTGTTGAACTTCCTGAGGGT
CAAATTCAAGAGGAGTTACAGAAATGA