Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040195
CDS Infomation

pacid=37464787 polypeptide=PGSC0003DMP400027262 locus=PGSC0003DMG400015551 ID=PGSC0003DMT400040195.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGAAACTCAGCTGCGATGGAGGTCACGAATTCAAGCTGCTCTTCTCATGTCCT
TCTGGTTTATCTCCTTCACAGGTGTCAGTTGTTTTCGATGAAGCATACGATAGGAATCTC
CATCCCGATCATACTTTGGAGAAGTCTATTTCTGAGATATGGGATGCAAGAGTTCAACAA
AGTTCATCACTTTACAATGGAACGAAGTTCAGGTACGGTGGGTACAACTTTAATGTAGAG
AATGATCCCAAGCAACAACCTCACGTTTCCCTTCATCTTGGTCTGACAGATTATAGGACA
TTCGTGGGAACAAATTTAAGTCCTATGTGGGAAAGATTTCTTGTTCCATCTGAAGATGAT
TGTATACAGTGTCAGCACACATCAAGTCCTCTGGGTAATGGGGCAGTTGTGGAGACTTCT
GACAGAAGAATACTTGTGCTTCAGAGAAGTAATAAAGTTGGAGAATTCCCTGGATATTTT
GTTTTTCCTGGAGGCCATCCAGAGCCCCAAGAAGTTGGAATAATCTCCCATGAAGGCTTC
CAAGAGCTGAATCAATGTCACATGATTAACAGCAAAGTTTCTCAGGAAATGTTTGACAGC
ATTGTCCGTGAAGTTGTTGAAGAAATTGGAGCTCCTGCAGATTCCCTCTCCAGTCCCATC
TTTATTGGTATATCGCGAAGAGTATTGAATGTTAGACCAACTGCTTTTTTCTTCATCAAA
TGCAATCTTCGGTCAGAGGAAATTCAACAACTGTATTCTAGTGCACAGGATAGCTTCGAG
TCAACTCAGCTTTATGCTGTTTCAATGAGTGATCTAGAGAACATGGCTTCTAAAATGCCT
GGCTGCCACAGGGGAGGCTACGCACTCTACAAATTAATGGTGCAAGACACGAGTGATAGC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400027262
PEP Infomation

pacid=37464787 transcript=PGSC0003DMT400040195 locus=PGSC0003DMG400015551 ID=PGSC0003DMT400040195.v4.03 annot-version=v4.03
Sequence

MEEKLSCDGGHEFKLLFSCPSGLSPSQVSVVFDEAYDRNLHPDHTLEKSISEIWDARVQQ
SSSLYNGTKFRYGGYNFNVENDPKQQPHVSLHLGLTDYRTFVGTNLSPMWERFLVPSEDD
CIQCQHTSSPLGNGAVVETSDRRILVLQRSNKVGEFPGYFVFPGGHPEPQEVGIISHEGF
QELNQCHMINSKVSQEMFDSIVREVVEEIGAPADSLSSPIFIGISRRVLNVRPTAFFFIK
CNLRSEEIQQLYSSAQDSFESTQLYAVSMSDLENMASKMPGCHRGGYALYKLMVQDTSDS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400040195
Transcript Infomation

pacid=37464787 locus=PGSC0003DMG400015551 ID=PGSC0003DMT400040195.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGAAACTCAGCTGCGATGGAGGTCACGAATTCAAGCTGCTCTTCTCATGTCCT
TCTGGTTTATCTCCTTCACAGGTGTCAGTTGTTTTCGATGAAGCATACGATAGGAATCTC
CATCCCGATCATACTTTGGAGAAGTCTATTTCTGAGATATGGGATGCAAGAGTTCAACAA
AGTTCATCACTTTACAATGGAACGAAGTTCAGGTACGGTGGGTACAACTTTAATGTAGAG
AATGATCCCAAGCAACAACCTCACGTTTCCCTTCATCTTGGTCTGACAGATTATAGGACA
TTCGTGGGAACAAATTTAAGTCCTATGTGGGAAAGATTTCTTGTTCCATCTGAAGATGAT
TGTATACAGTGTCAGCACACATCAAGTCCTCTGGGTAATGGGGCAGTTGTGGAGACTTCT
GACAGAAGAATACTTGTGCTTCAGAGAAGTAATAAAGTTGGAGAATTCCCTGGATATTTT
GTTTTTCCTGGAGGCCATCCAGAGCCCCAAGAAGTTGGAATAATCTCCCATGAAGGCTTC
CAAGAGCTGAATCAATGTCACATGATTAACAGCAAAGTTTCTCAGGAAATGTTTGACAGC
ATTGTCCGTGAAGTTGTTGAAGAAATTGGAGCTCCTGCAGATTCCCTCTCCAGTCCCATC
TTTATTGGTATATCGCGAAGAGTATTGAATGTTAGACCAACTGCTTTTTTCTTCATCAAA
TGCAATCTTCGGTCAGAGGAAATTCAACAACTGTATTCTAGTGCACAGGATAGCTTCGAG
TCAACTCAGCTTTATGCTGTTTCAATGAGTGATCTAGAGAACATGGCTTCTAAAATGCCT
GGCTGCCACAGGGGAGGCTACGCACTCTACAAATTAATGGTGCAAGACACGAGTGATAGC
TAA