Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040189
CDS Infomation

pacid=37466320 polypeptide=PGSC0003DMP400027258 locus=PGSC0003DMG400015549 ID=PGSC0003DMT400040189.v4.03 annot-version=v4.03
Sequence

ATGGATGAAGAATTGCTAGAATTGCAGAGACAATTCGAATTTGCACAACAAGTAAAATCT
ACTGTTCGATTATCAGACCGAAATGTTGTCGAATTGGTCCAGAAACTTCATCAGCTCCAA
ATCATTGACTTTGATCTCCTTCATACTATCTCCGGCAAAGAATACATCACTCCGGAGCAA
TTGAGGAATGAAATTGTGGCAGAGATCAAAAGACTAGGACGTGTTTCGTTGATTGATTTA
GCTGATTCTACGGGGGTAGACTTGTACCATGTTGAGAAACAAGCTCAGTATGTAGTATCC
CATGACTCATCCCTCATGTTAATTAATGGGGAAATTATCTCGAACACGTATTGGGATACG
GCAGCTGAAGAAATCAATGAAAGACTTCAAGAATGTAGCCAAATTGCCATTGCTGAAATA
GCAGGACAACTACAAGTTGGATCAGAGCTAGTAGTATCCATTCTTGAACCTCGTCTTAGG
ACTTTGGTAAAAGGTAGGCTTGAAGGTGGGCAGTTGTATACACCCGCCTATGTTGCTCGT
GTAAGTGCAATGGTCCGTGGTGCAGCTAGGGGTATTTTTGTTCCAATGAACACAACAGCA
TTATGGAACTCCTTGCTGACTTTACTGCAAGAGATGGACGGAGCTGTTGGTGTTGCTGTT
GACACTTCATTTTTCCAGTCCTTGTTTAATGGCTTAGTAAAAGAAGGCGAGATTCTCGGC
TCTCTTCGTGCAGGAGTTCATTGGACACCTTCCGTCTTTGCCATAGCACAAAAGGACTGT
GTAGATTCCTTCTTTTCGCAGAATTCTTTTGTTACTTATCAAGCTCTGAAAAAACTCGGG
ATTCCGCAACCTTCTCAATTCCTGCAGTCTAGATATCCAGATGGTATATCTCTGGACTCA
ACATTTGCTCACCCTTCTATAATTGAGATACTGGATGCTGCTGTTGAGGATGCCATAGAA
CGTAATAGCTGGATTGATTCGCTTTCAGTTTTACCCGCTTCCTTTGGTAGCCAAGATGCA
TTTAAGATTCTGTCACTATGTCCATCAGTTCAAGCAGCACAAAAGTCAAATAGAGCACTT
ATCTTGGGAGATACATATATTTTTAGCAATGGGTTTGTCAAGGATCTGTTTGATCGGATG
GAAAAAGAGATGGAAACATTAAGCATTCCAGGGCTTGTCGGTTCTGGGCCTGTAGATGAG
TTTCGTGTTGCTAAAGATGCTAAAGTTGGATATGATAATAGCACCATTGAAGTAAATGAA
ACAAGCAGTGATGCCGGTATCAGCAAACAGGCCTCGGAGAAAGGATCTAAGAAGAAAAAA
GGAAAATCAGGTGGGAATACTAAGATGGCGCAAGCTGAAACAGGGACAGATAACCAGGAA
TCTGCCCCTAGTAAATCTAAGAAAAGCCAGAGGAAAGGTAAAGTGTCATCTGGCTCACAA
ACGTCAGAATCAAAGTCAGGTGCTAGAAAGGATGAGGACAGTGTTGGCGCTATTTCCGAA
GAATGGGTAATTCAGAAGATCACATCTCTTAATCCTGACTTTGAAGAACAAGGTCTGGAT
AACCCGGAGATGATTCTTTTGCCTTTAGCAAAACATCTGAGACCTTTGCTCGTCAATTCA
TGGAAGGAACGAAAAAAGGCTGCTTTCACTGAAAATACCCAAAAAATAAAAAAACTACTT
GATAATTTGCAAAAGAAACTTGATGAGTCATTTTTAAACATGCAGCTTTGTGAAAAAGCC
CTCGATTTGTTTGAAGATGACCCATCAACTTCGGTTCTTCTACACAAGCATCTATTGCGA
ACTACAGGAACCTCAATTGTTGATACATTGTTGCTTAACCTGGATTTGCTCAATAAACTG
AAAAATGGAGTTCCGGTGGAGCCTCAAACTCCCGAATCCATTCTACTTAGCCCTGGAGAT
AGAAGCGCTCTGGCTAAGAGTCTGCCAGGTAGTATGTCAGCCAAGGCCATTGAAACAGTT
GAAGCTTTAGAAGGGAAGCGGGTGGAATCATTTATGTCGGCACTAAGAGAAGTTGCCGAG
GAAAGTGGATTAGCTTTGAAGAAGCTTGACAAAAAATTGGAAAGAACCCTTTTGCATTCG
TATCGTAAGGATTTGACAGCTCAAGTTTCTGCTGAAACGGATCCAGTTTCCCTCTTACCG
CAAGTTATATCTCTCCTATATGTACAGGTTCATGGAAAAGCTCTTCAGGCTCCTGGTAGG
GCCATTTCAGCTGCTGTCTCTCGGTTAAAGGATAAACTGGATGACTCGGCATTCAAGACT
TTGGTTGATTACCAGAGTGGAACAGTGAGCGTCTTGGCTCTAATGGCTTCTGCAACTGGG
GACGAGGAAGATTGTACATCTGACAGAATTTTGAGCAAAAGGGAAGTGTTAGAGGAATTG
ATGCCTGCATTGAAGGGACTAGTGCTAGGTACCACACAGTCACAAGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400027258
PEP Infomation

pacid=37466320 transcript=PGSC0003DMT400040189 locus=PGSC0003DMG400015549 ID=PGSC0003DMT400040189.v4.03 annot-version=v4.03
Sequence

MDEELLELQRQFEFAQQVKSTVRLSDRNVVELVQKLHQLQIIDFDLLHTISGKEYITPEQ
LRNEIVAEIKRLGRVSLIDLADSTGVDLYHVEKQAQYVVSHDSSLMLINGEIISNTYWDT
AAEEINERLQECSQIAIAEIAGQLQVGSELVVSILEPRLRTLVKGRLEGGQLYTPAYVAR
VSAMVRGAARGIFVPMNTTALWNSLLTLLQEMDGAVGVAVDTSFFQSLFNGLVKEGEILG
SLRAGVHWTPSVFAIAQKDCVDSFFSQNSFVTYQALKKLGIPQPSQFLQSRYPDGISLDS
TFAHPSIIEILDAAVEDAIERNSWIDSLSVLPASFGSQDAFKILSLCPSVQAAQKSNRAL
ILGDTYIFSNGFVKDLFDRMEKEMETLSIPGLVGSGPVDEFRVAKDAKVGYDNSTIEVNE
TSSDAGISKQASEKGSKKKKGKSGGNTKMAQAETGTDNQESAPSKSKKSQRKGKVSSGSQ
TSESKSGARKDEDSVGAISEEWVIQKITSLNPDFEEQGLDNPEMILLPLAKHLRPLLVNS
WKERKKAAFTENTQKIKKLLDNLQKKLDESFLNMQLCEKALDLFEDDPSTSVLLHKHLLR
TTGTSIVDTLLLNLDLLNKLKNGVPVEPQTPESILLSPGDRSALAKSLPGSMSAKAIETV
EALEGKRVESFMSALREVAEESGLALKKLDKKLERTLLHSYRKDLTAQVSAETDPVSLLP
QVISLLYVQVHGKALQAPGRAISAAVSRLKDKLDDSAFKTLVDYQSGTVSVLALMASATG
DEEDCTSDRILSKREVLEELMPALKGLVLGTTQSQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400040189
Transcript Infomation

pacid=37466320 locus=PGSC0003DMG400015549 ID=PGSC0003DMT400040189.v4.03 annot-version=v4.03
Sequence

ATGGATGAAGAATTGCTAGAATTGCAGAGACAATTCGAATTTGCACAACAAGTAAAATCT
ACTGTTCGATTATCAGACCGAAATGTTGTCGAATTGGTCCAGAAACTTCATCAGCTCCAA
ATCATTGACTTTGATCTCCTTCATACTATCTCCGGCAAAGAATACATCACTCCGGAGCAA
TTGAGGAATGAAATTGTGGCAGAGATCAAAAGACTAGGACGTGTTTCGTTGATTGATTTA
GCTGATTCTACGGGGGTAGACTTGTACCATGTTGAGAAACAAGCTCAGTATGTAGTATCC
CATGACTCATCCCTCATGTTAATTAATGGGGAAATTATCTCGAACACGTATTGGGATACG
GCAGCTGAAGAAATCAATGAAAGACTTCAAGAATGTAGCCAAATTGCCATTGCTGAAATA
GCAGGACAACTACAAGTTGGATCAGAGCTAGTAGTATCCATTCTTGAACCTCGTCTTAGG
ACTTTGGTAAAAGGTAGGCTTGAAGGTGGGCAGTTGTATACACCCGCCTATGTTGCTCGT
GTAAGTGCAATGGTCCGTGGTGCAGCTAGGGGTATTTTTGTTCCAATGAACACAACAGCA
TTATGGAACTCCTTGCTGACTTTACTGCAAGAGATGGACGGAGCTGTTGGTGTTGCTGTT
GACACTTCATTTTTCCAGTCCTTGTTTAATGGCTTAGTAAAAGAAGGCGAGATTCTCGGC
TCTCTTCGTGCAGGAGTTCATTGGACACCTTCCGTCTTTGCCATAGCACAAAAGGACTGT
GTAGATTCCTTCTTTTCGCAGAATTCTTTTGTTACTTATCAAGCTCTGAAAAAACTCGGG
ATTCCGCAACCTTCTCAATTCCTGCAGTCTAGATATCCAGATGGTATATCTCTGGACTCA
ACATTTGCTCACCCTTCTATAATTGAGATACTGGATGCTGCTGTTGAGGATGCCATAGAA
CGTAATAGCTGGATTGATTCGCTTTCAGTTTTACCCGCTTCCTTTGGTAGCCAAGATGCA
TTTAAGATTCTGTCACTATGTCCATCAGTTCAAGCAGCACAAAAGTCAAATAGAGCACTT
ATCTTGGGAGATACATATATTTTTAGCAATGGGTTTGTCAAGGATCTGTTTGATCGGATG
GAAAAAGAGATGGAAACATTAAGCATTCCAGGGCTTGTCGGTTCTGGGCCTGTAGATGAG
TTTCGTGTTGCTAAAGATGCTAAAGTTGGATATGATAATAGCACCATTGAAGTAAATGAA
ACAAGCAGTGATGCCGGTATCAGCAAACAGGCCTCGGAGAAAGGATCTAAGAAGAAAAAA
GGAAAATCAGGTGGGAATACTAAGATGGCGCAAGCTGAAACAGGGACAGATAACCAGGAA
TCTGCCCCTAGTAAATCTAAGAAAAGCCAGAGGAAAGGTAAAGTGTCATCTGGCTCACAA
ACGTCAGAATCAAAGTCAGGTGCTAGAAAGGATGAGGACAGTGTTGGCGCTATTTCCGAA
GAATGGGTAATTCAGAAGATCACATCTCTTAATCCTGACTTTGAAGAACAAGGTCTGGAT
AACCCGGAGATGATTCTTTTGCCTTTAGCAAAACATCTGAGACCTTTGCTCGTCAATTCA
TGGAAGGAACGAAAAAAGGCTGCTTTCACTGAAAATACCCAAAAAATAAAAAAACTACTT
GATAATTTGCAAAAGAAACTTGATGAGTCATTTTTAAACATGCAGCTTTGTGAAAAAGCC
CTCGATTTGTTTGAAGATGACCCATCAACTTCGGTTCTTCTACACAAGCATCTATTGCGA
ACTACAGGAACCTCAATTGTTGATACATTGTTGCTTAACCTGGATTTGCTCAATAAACTG
AAAAATGGAGTTCCGGTGGAGCCTCAAACTCCCGAATCCATTCTACTTAGCCCTGGAGAT
AGAAGCGCTCTGGCTAAGAGTCTGCCAGGTAGTATGTCAGCCAAGGCCATTGAAACAGTT
GAAGCTTTAGAAGGGAAGCGGGTGGAATCATTTATGTCGGCACTAAGAGAAGTTGCCGAG
GAAAGTGGATTAGCTTTGAAGAAGCTTGACAAAAAATTGGAAAGAACCCTTTTGCATTCG
TATCGTAAGGATTTGACAGCTCAAGTTTCTGCTGAAACGGATCCAGTTTCCCTCTTACCG
CAAGTTATATCTCTCCTATATGTACAGGTTCATGGAAAAGCTCTTCAGGCTCCTGGTAGG
GCCATTTCAGCTGCTGTCTCTCGGTTAAAGGATAAACTGGATGACTCGGCATTCAAGACT
TTGGTTGATTACCAGAGTGGAACAGTGAGCGTCTTGGCTCTAATGGCTTCTGCAACTGGG
GACGAGGAAGATTGTACATCTGACAGAATTTTGAGCAAAAGGGAAGTGTTAGAGGAATTG
ATGCCTGCATTGAAGGGACTAGTGCTAGGTACCACACAGTCACAAGCATAG