Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040181
CDS Infomation

pacid=37464515 polypeptide=PGSC0003DMP400027250 locus=PGSC0003DMG400015544 ID=PGSC0003DMT400040181.v4.03 annot-version=v4.03
Sequence

ATGGAGTCATCGCAATCGCAGCTACAGAGAAGAGGAGGAGGTTTAGTTTCGATGTCACCG
TCGCATACGCCGCGGTCGAGTGATAAAGTGGTGAGAGATCTGCGATCGGGGGAAGGGAAT
GTGAATGGAAGGCATGATAAAGAAAAAGGTGTAAATGTGCAAGTTATTTTGCGTTGCAGG
CCGTTGAGTGAGGATGAGATAAGATTGCATACACCAGTTGTGATTTCCTGTAATGAGGGT
AGAAGAGAAGTTTCTGCTATTCAGAACATAGCTAATAAGCAGATTGACAGAACATTTGCC
TTTGATAAGGTGTTTGGTCCAACATCCCAACAGAAGGACCTGTATGATTCTGCAATATGG
CCTATTGTTTTTGAAGTTCTAGAGGGATATAACTGCACCATTTTTGCTTATGGGCAGACA
GGAACAGGAAAAACTTACACAATGGAGGGAGGGGCAAGAAAGAAGAATGGGGAATTTCCA
AGTGATGCAGGTGTTATCCCCCGAGCTGTTAAACAAATTTTTGAGATATTGGAAGCTCAA
AATGCTGAATATAGCATGAAAGTAACACATTTGGAGCTTTATAATGAGGAGATCACAGAT
CTTTTAGCTCCTGAGGAATGCACAAAGTATGTAGATGATAAATCCAAAAAACCAATAGCG
CTAATGGAAGATGGTAAGGGTGGAGTTTTAGTTAGAGGTTTAGAAGAGGAGATTGTTTCC
ACTGCAAATGAAATCTATAAGATCTTGGAGAAAGGTTCAGCTAAGAGGCGTACAGCAGAG
ACTCTTCTTAACAAACAGAGTAGTCGTTCTCACTCTATTTTCTCTATCACAATTCATATC
AAGGAATGCACTCCAGAAGGGGAAGAGATGATCAAATGTGGCAAATTGAACCTTGTAGAC
CTTGCTGGTTCTGAGAACATATCACGTTCTGGTGCAAGGGAGGGCAGAGCGAGGGAAGCT
GGAGAAATCAACAAGAGTTTGCTTACACTTGGTCGTGTTATAAATGCTTTAGTTGAACAC
TCTGGTCATATCCCATACAGGGATAGCAAATTGACACGGTTGTTGAGGGATTCTCTTGGA
GGGAAAACAAAGACATGCATTATTGCAACAATATCACCATCAGTTCACTGTCTGGAAGAG
ACACTGAGCACTTTAGATTACGCTCATCGTGCCAAAAATATAAAGAACAAACCAGAGATT
AACCAGAAGATGATGAAATCTGCATTAATCAAAGATTTGTACTCCGAGATTGACAGACTG
AAGCAAGAGGTGTATGCTGCAAGAGAGAAGAATGGCATTTATATACCAAGAGACCGATAT
CTTCAAGACGAAGCAGAGAAGAAGGCAATGTCTGAAAAGATAGAACGGATGGAACTTGAC
TTCGAATCCAGGGACAAGCAATTTATGGAACTTAAGGAACTATACAATTCTCAGCAATTG
TTGACAGCAGAGTTGGGTGACAAACTTGAGAAGACAGAGAAAAAGCTTCAGGAAACTCAG
CATACATTGGCTGATCTCGAAGAGAAACACAGGCAGGCAATTACCACTATAAAAGAAAAG
GAATTTCTGATATCTAACCTTCTAAAATCTGAAAAAGCACTGGTTGAGCAAGCATTTGAA
CTTCGAGCTGAACTGGAAAATGCTGCATCAGACGTGTCGAACTTGTTTGCCAAGATTGAG
CGCAAAGACAAAATAGAAGATGGAAACAGAGTTCTCATCCAAAATTTCCAATCCCAGCTG
ACTCAACAGCTTGAAGTCCTGCATAAGACTGTTGCTTCTTCAACCACACAACAAGAGCAA
CAACTCAAAGGCATGGAGGAAGACATGCAGTCCTTTGTTTCTACAAAGACTGAGGCAGTG
GAAGAGCTTCGAGGCCGTCTGGAGAACTTAAAAACCATGTTTGGTTCTGGTATCAAAGCT
TTAGATGGTTTGACTGGGGAACTTGACGGCAATGCTCAGTCAACCTTTGACCGTTTAAAT
TGTGAAGTTTCTAAACATTCTTCTGCTTTAGGAGAGCTTTTTAAGGAGATTGCTTCTGCG
GCAGATGCCTTGGTTAATGATCTTCAAAAAAGTTTACATGATCAGAAGGAGAAACTAATC
ACATTTGCACTACAGCAACGTGAGGCACATTGCGGGAGTATCACAATGTCAAGGTCCATT
TCTCAGATTACTGGGAACTTCTTTAAGACTCTAGATATGCATGTGTCCCAGTTAGGTGAA
ATAGTGGAAGAAGCACAGACGGTCAGTGACCAGAAATTCTCTGAACTAGAAAAGAAGTTT
GAGGAATGTGCTGCCAATGAGGAAAGACAAATCTTGGAGAAAGTGGCAGAGTTGCTCGCT
GGATCAAATGCTAGGAAGAAAAAGCTGGTTCAAACTGCTATCGATGACCTTAGAGAAAGT
GCGTCCAACAGAACTAACAGACTGAAACAAGAGATGTCAACCATGCAAGATTCAACTTCT
TCAGTTAAAGTCAAATGGACTGCTTACATGGACAAGGCTGAATCACACCATCTTGAAGAT
ACTACTGCTGTGGAAAATGGGAAGAAAGAGATGGAAGAGGTGCTACAGAATTGTGTGCAA
AAGGCTAAATTGGGAGCTATGCAATGGACAAATGCTCAACAGTCTTTATTAGACCTAGAG
GAGAGAAATGTTGCGTTTGTTGATGAAATTGTTAGGGGAGGAATGGATGCAAATCAAGCA
TTACGTGTAAGATTTTCATCTGGAGTGTCATCCACTCTTGAAGACACTGATGCTGCTAGC
AAACACCTACTCTCATCTATTGACCATTCTTTACAACTCGACCGTGATGCTTGTGCAAAC
CTTGATTCTACGATTGTTCCTTGTTGCGGAGAGCTGCGAGAACTAAACAGCGTACACTAC
CACAAGGTTGTTGAAATTACGGAGTACACTGGAAAAAGTCTTTCACAAGAATACATGGTT
GATGAACCGTCGTGCTCGACTCCTACAAAGAGACCATTTAATCTTCCAAGCGTTGAGTCT
ATTGAAGAACTAAAAACTCCCGCTTTCGAAGAGTTGTTGAATTCATTTTGGGATGAAAAA
TCCTCAAAGCTATCAAATGGAGATGTAAAGCATAGTATAGAGATAGAGGTAGTAGATCCT
TCTTTACGAGATTCAAGAGTTCCCCTCACTGCTGTAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027250
PEP Infomation

pacid=37464515 transcript=PGSC0003DMT400040181 locus=PGSC0003DMG400015544 ID=PGSC0003DMT400040181.v4.03 annot-version=v4.03
Sequence

MESSQSQLQRRGGGLVSMSPSHTPRSSDKVVRDLRSGEGNVNGRHDKEKGVNVQVILRCR
PLSEDEIRLHTPVVISCNEGRREVSAIQNIANKQIDRTFAFDKVFGPTSQQKDLYDSAIW
PIVFEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFEILEAQ
NAEYSMKVTHLELYNEEITDLLAPEECTKYVDDKSKKPIALMEDGKGGVLVRGLEEEIVS
TANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVD
LAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHIPYRDSKLTRLLRDSLG
GKTKTCIIATISPSVHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSALIKDLYSEIDRL
KQEVYAAREKNGIYIPRDRYLQDEAEKKAMSEKIERMELDFESRDKQFMELKELYNSQQL
LTAELGDKLEKTEKKLQETQHTLADLEEKHRQAITTIKEKEFLISNLLKSEKALVEQAFE
LRAELENAASDVSNLFAKIERKDKIEDGNRVLIQNFQSQLTQQLEVLHKTVASSTTQQEQ
QLKGMEEDMQSFVSTKTEAVEELRGRLENLKTMFGSGIKALDGLTGELDGNAQSTFDRLN
CEVSKHSSALGELFKEIASAADALVNDLQKSLHDQKEKLITFALQQREAHCGSITMSRSI
SQITGNFFKTLDMHVSQLGEIVEEAQTVSDQKFSELEKKFEECAANEERQILEKVAELLA
GSNARKKKLVQTAIDDLRESASNRTNRLKQEMSTMQDSTSSVKVKWTAYMDKAESHHLED
TTAVENGKKEMEEVLQNCVQKAKLGAMQWTNAQQSLLDLEERNVAFVDEIVRGGMDANQA
LRVRFSSGVSSTLEDTDAASKHLLSSIDHSLQLDRDACANLDSTIVPCCGELRELNSVHY
HKVVEITEYTGKSLSQEYMVDEPSCSTPTKRPFNLPSVESIEELKTPAFEELLNSFWDEK
SSKLSNGDVKHSIEIEVVDPSLRDSRVPLTAVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400040181
Transcript Infomation

pacid=37464515 locus=PGSC0003DMG400015544 ID=PGSC0003DMT400040181.v4.03 annot-version=v4.03
Sequence

ATGGAGTCATCGCAATCGCAGCTACAGAGAAGAGGAGGAGGTTTAGTTTCGATGTCACCG
TCGCATACGCCGCGGTCGAGTGATAAAGTGGTGAGAGATCTGCGATCGGGGGAAGGGAAT
GTGAATGGAAGGCATGATAAAGAAAAAGGTGTAAATGTGCAAGTTATTTTGCGTTGCAGG
CCGTTGAGTGAGGATGAGATAAGATTGCATACACCAGTTGTGATTTCCTGTAATGAGGGT
AGAAGAGAAGTTTCTGCTATTCAGAACATAGCTAATAAGCAGATTGACAGAACATTTGCC
TTTGATAAGGTGTTTGGTCCAACATCCCAACAGAAGGACCTGTATGATTCTGCAATATGG
CCTATTGTTTTTGAAGTTCTAGAGGGATATAACTGCACCATTTTTGCTTATGGGCAGACA
GGAACAGGAAAAACTTACACAATGGAGGGAGGGGCAAGAAAGAAGAATGGGGAATTTCCA
AGTGATGCAGGTGTTATCCCCCGAGCTGTTAAACAAATTTTTGAGATATTGGAAGCTCAA
AATGCTGAATATAGCATGAAAGTAACACATTTGGAGCTTTATAATGAGGAGATCACAGAT
CTTTTAGCTCCTGAGGAATGCACAAAGTATGTAGATGATAAATCCAAAAAACCAATAGCG
CTAATGGAAGATGGTAAGGGTGGAGTTTTAGTTAGAGGTTTAGAAGAGGAGATTGTTTCC
ACTGCAAATGAAATCTATAAGATCTTGGAGAAAGGTTCAGCTAAGAGGCGTACAGCAGAG
ACTCTTCTTAACAAACAGAGTAGTCGTTCTCACTCTATTTTCTCTATCACAATTCATATC
AAGGAATGCACTCCAGAAGGGGAAGAGATGATCAAATGTGGCAAATTGAACCTTGTAGAC
CTTGCTGGTTCTGAGAACATATCACGTTCTGGTGCAAGGGAGGGCAGAGCGAGGGAAGCT
GGAGAAATCAACAAGAGTTTGCTTACACTTGGTCGTGTTATAAATGCTTTAGTTGAACAC
TCTGGTCATATCCCATACAGGGATAGCAAATTGACACGGTTGTTGAGGGATTCTCTTGGA
GGGAAAACAAAGACATGCATTATTGCAACAATATCACCATCAGTTCACTGTCTGGAAGAG
ACACTGAGCACTTTAGATTACGCTCATCGTGCCAAAAATATAAAGAACAAACCAGAGATT
AACCAGAAGATGATGAAATCTGCATTAATCAAAGATTTGTACTCCGAGATTGACAGACTG
AAGCAAGAGGTGTATGCTGCAAGAGAGAAGAATGGCATTTATATACCAAGAGACCGATAT
CTTCAAGACGAAGCAGAGAAGAAGGCAATGTCTGAAAAGATAGAACGGATGGAACTTGAC
TTCGAATCCAGGGACAAGCAATTTATGGAACTTAAGGAACTATACAATTCTCAGCAATTG
TTGACAGCAGAGTTGGGTGACAAACTTGAGAAGACAGAGAAAAAGCTTCAGGAAACTCAG
CATACATTGGCTGATCTCGAAGAGAAACACAGGCAGGCAATTACCACTATAAAAGAAAAG
GAATTTCTGATATCTAACCTTCTAAAATCTGAAAAAGCACTGGTTGAGCAAGCATTTGAA
CTTCGAGCTGAACTGGAAAATGCTGCATCAGACGTGTCGAACTTGTTTGCCAAGATTGAG
CGCAAAGACAAAATAGAAGATGGAAACAGAGTTCTCATCCAAAATTTCCAATCCCAGCTG
ACTCAACAGCTTGAAGTCCTGCATAAGACTGTTGCTTCTTCAACCACACAACAAGAGCAA
CAACTCAAAGGCATGGAGGAAGACATGCAGTCCTTTGTTTCTACAAAGACTGAGGCAGTG
GAAGAGCTTCGAGGCCGTCTGGAGAACTTAAAAACCATGTTTGGTTCTGGTATCAAAGCT
TTAGATGGTTTGACTGGGGAACTTGACGGCAATGCTCAGTCAACCTTTGACCGTTTAAAT
TGTGAAGTTTCTAAACATTCTTCTGCTTTAGGAGAGCTTTTTAAGGAGATTGCTTCTGCG
GCAGATGCCTTGGTTAATGATCTTCAAAAAAGTTTACATGATCAGAAGGAGAAACTAATC
ACATTTGCACTACAGCAACGTGAGGCACATTGCGGGAGTATCACAATGTCAAGGTCCATT
TCTCAGATTACTGGGAACTTCTTTAAGACTCTAGATATGCATGTGTCCCAGTTAGGTGAA
ATAGTGGAAGAAGCACAGACGGTCAGTGACCAGAAATTCTCTGAACTAGAAAAGAAGTTT
GAGGAATGTGCTGCCAATGAGGAAAGACAAATCTTGGAGAAAGTGGCAGAGTTGCTCGCT
GGATCAAATGCTAGGAAGAAAAAGCTGGTTCAAACTGCTATCGATGACCTTAGAGAAAGT
GCGTCCAACAGAACTAACAGACTGAAACAAGAGATGTCAACCATGCAAGATTCAACTTCT
TCAGTTAAAGTCAAATGGACTGCTTACATGGACAAGGCTGAATCACACCATCTTGAAGAT
ACTACTGCTGTGGAAAATGGGAAGAAAGAGATGGAAGAGGTGCTACAGAATTGTGTGCAA
AAGGCTAAATTGGGAGCTATGCAATGGACAAATGCTCAACAGTCTTTATTAGACCTAGAG
GAGAGAAATGTTGCGTTTGTTGATGAAATTGTTAGGGGAGGAATGGATGCAAATCAAGCA
TTACGTGTAAGATTTTCATCTGGAGTGTCATCCACTCTTGAAGACACTGATGCTGCTAGC
AAACACCTACTCTCATCTATTGACCATTCTTTACAACTCGACCGTGATGCTTGTGCAAAC
CTTGATTCTACGATTGTTCCTTGTTGCGGAGAGCTGCGAGAACTAAACAGCGTACACTAC
CACAAGGTTGTTGAAATTACGGAGTACACTGGAAAAAGTCTTTCACAAGAATACATGGTT
GATGAACCGTCGTGCTCGACTCCTACAAAGAGACCATTTAATCTTCCAAGCGTTGAGTCT
ATTGAAGAACTAAAAACTCCCGCTTTCGAAGAGTTGTTGAATTCATTTTGGGATGAAAAA
TCCTCAAAGCTATCAAATGGAGATGTAAAGCATAGTATAGAGATAGAGGTAGTAGATCCT
TCTTTACGAGATTCAAGAGTTCCCCTCACTGCTGTAAATTAG