Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040163
CDS Infomation

pacid=37467180 polypeptide=PGSC0003DMP400027237 locus=PGSC0003DMG400015539 ID=PGSC0003DMT400040163.v4.03 annot-version=v4.03
Sequence

ATGGATATTGATCTAACCCCAAAGTTGGCTAAGCAAGTTTATGGAGGAGATGGTGGTTCT
TATCATGCATGGTGTCCTAATGAGCTTCCCATGTTGAAGGAAGGAAATATTGGCGCTGGG
AAACTTGCTCTTACAAAGAATGGCTTTGCTTTGCCTCGTTACTCTGATTCCGCTAAGGTC
GCCTATGTTCTTCAAGGTAGTGGAGTTGCTGGAATTGTTCTTCCGGAAAAAGACGAGAAG
GTGGTAGCCATTAAGAAGGGTGATTCTATTGCCCTTCCTTTTGGTGTTGTAACATGGTGG
TACAACAAAGAGGACCCTGAACTTGTGGTTCTCTTCCTTGGTGATACCAAAACTGCACAT
AAGGCTGGTTCATTTACTGACATGTACTTGACCGGCTCCAATGGAATTTTCACCGGTTTC
TCAACTGAGTTTGTTAGCAGGGCATGGGATGTAGAAGAGAGTGTTGCTAAGACTCTAGTT
AGCTCCCAGACTGCTAAGGGCATTGTGAAGCTCGATGCAGGCTTCCAAATGCCTGAGCCT
AAGCAAGCCAACAGGGATGGCATGGTTCTCAACTGTGAGGAAGCTCCATTGGATGTTGAT
ATCAAGGGCGGTGGAAGGGTTGTTGTTTTGAATACCAAGAACTTGCCATTAGTTGGCGAA
GTTGGAACTGGTGCTGATCTTGTTAGGTTGAACGGAAGTGCTATGTGCTCTCCCGGTTTC
TCGTGTGACTCAGCCTTTCAAGTCACCTACATTGTCAGAGGCAGTGGCCGAGTTCAGGTT
GTTGGCCCTGATGGTAAGTGTATTCTTGAAACACATCTCAAGCCTGGTAATCTATTCATT
GTTCCGAGGTTCTGTGTTGTCTCGAAGATTGCTGATCCTGATGGCATGGATTGGTTCTCC
ATCATCACTACGCCCAACCCAAAGTTCACAAACTTGGCTGGAAAGGTTTCACCATGGAAA
TCTCTATCCCCACAAGTTCTGCAGGCCTCTTTCAAGGTTGCACCAGAGGTAGAGAAGCAT
TTCAGCTCCAAGAGAACTGCAGAAGAGGTGTTCTTCCCACCACCAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027237
PEP Infomation

pacid=37467180 transcript=PGSC0003DMT400040163 locus=PGSC0003DMG400015539 ID=PGSC0003DMT400040163.v4.03 annot-version=v4.03
Sequence

MDIDLTPKLAKQVYGGDGGSYHAWCPNELPMLKEGNIGAGKLALTKNGFALPRYSDSAKV
AYVLQGSGVAGIVLPEKDEKVVAIKKGDSIALPFGVVTWWYNKEDPELVVLFLGDTKTAH
KAGSFTDMYLTGSNGIFTGFSTEFVSRAWDVEESVAKTLVSSQTAKGIVKLDAGFQMPEP
KQANRDGMVLNCEEAPLDVDIKGGGRVVVLNTKNLPLVGEVGTGADLVRLNGSAMCSPGF
SCDSAFQVTYIVRGSGRVQVVGPDGKCILETHLKPGNLFIVPRFCVVSKIADPDGMDWFS
IITTPNPKFTNLAGKVSPWKSLSPQVLQASFKVAPEVEKHFSSKRTAEEVFFPPPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400040163
Transcript Infomation

pacid=37467180 locus=PGSC0003DMG400015539 ID=PGSC0003DMT400040163.v4.03 annot-version=v4.03
Sequence

ATGGATATTGATCTAACCCCAAAGTTGGCTAAGCAAGTTTATGGAGGAGATGGTGGTTCT
TATCATGCATGGTGTCCTAATGAGCTTCCCATGTTGAAGGAAGGAAATATTGGCGCTGGG
AAACTTGCTCTTACAAAGAATGGCTTTGCTTTGCCTCGTTACTCTGATTCCGCTAAGGTC
GCCTATGTTCTTCAAGGTAGTGGAGTTGCTGGAATTGTTCTTCCGGAAAAAGACGAGAAG
GTGGTAGCCATTAAGAAGGGTGATTCTATTGCCCTTCCTTTTGGTGTTGTAACATGGTGG
TACAACAAAGAGGACCCTGAACTTGTGGTTCTCTTCCTTGGTGATACCAAAACTGCACAT
AAGGCTGGTTCATTTACTGACATGTACTTGACCGGCTCCAATGGAATTTTCACCGGTTTC
TCAACTGAGTTTGTTAGCAGGGCATGGGATGTAGAAGAGAGTGTTGCTAAGACTCTAGTT
AGCTCCCAGACTGCTAAGGGCATTGTGAAGCTCGATGCAGGCTTCCAAATGCCTGAGCCT
AAGCAAGCCAACAGGGATGGCATGGTTCTCAACTGTGAGGAAGCTCCATTGGATGTTGAT
ATCAAGGGCGGTGGAAGGGTTGTTGTTTTGAATACCAAGAACTTGCCATTAGTTGGCGAA
GTTGGAACTGGTGCTGATCTTGTTAGGTTGAACGGAAGTGCTATGTGCTCTCCCGGTTTC
TCGTGTGACTCAGCCTTTCAAGTCACCTACATTGTCAGAGGCAGTGGCCGAGTTCAGGTT
GTTGGCCCTGATGGTAAGTGTATTCTTGAAACACATCTCAAGCCTGGTAATCTATTCATT
GTTCCGAGGTTCTGTGTTGTCTCGAAGATTGCTGATCCTGATGGCATGGATTGGTTCTCC
ATCATCACTACGCCCAACCCAAAGTTCACAAACTTGGCTGGAAAGGTTTCACCATGGAAA
TCTCTATCCCCACAAGTTCTGCAGGCCTCTTTCAAGGTTGCACCAGAGGTAGAGAAGCAT
TTCAGCTCCAAGAGAACTGCAGAAGAGGTGTTCTTCCCACCACCAAACTGA