Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040161
CDS Infomation

pacid=37466207 polypeptide=PGSC0003DMP400027235 locus=PGSC0003DMG400015538 ID=PGSC0003DMT400040161.v4.03 annot-version=v4.03
Sequence

ATGGATTGTGTGTTGTTTAATCAGCTATTAGCTCCAAGAATCTTTATTAGCTCAAATGTT
CATCATCAATCTTTTGGCAATTCACATAATAATATTGTTGGAATTGGACACTATAGAAAA
AGACTATCTTCTCCCAATTTGAATACTTGGACATGTAGGGTTGCTGAGACTCCATTTGAG
AATGGATCTTTATTTGAAACATTGAGTGCTGAAATAACCCCTCAAACTATTGATTTCTTT
GTGAGTGAAACAGAGGGTGATCCTGATTGTCCCACTAAAGGCTATTCTTCAATTGGAGAG
GCACTTAATGCATTGTCTCAAGGAAAGTTTGTCATTGTTGTAGATGATGAAAGTGGGGAA
GTGGAAGGAAACCTTGTCATGGCAGCATCATTTATTAGTGCTGAGGCAATTGCATTTATG
GTGAGACATGGTTCAGGCATTATTTCTGTGGGCATGAAGGAAGAGGATCTTGAGCGGCTC
AATCTTCCTTTGATGTCACCTGAAAAAGAAAATGACTCTTCTGCTCCATCCTTCACAATC
ACAGTGGATGCTAAGAAGGGCACATCTACTGGTGTATCGGCTTCAGATAGGGCTAAAACT
GTCCTGGCATTGTCCTCTCCTACTTCTACTCCTGAAGATTTCATAAGGCCAGGCCATGTT
TTTCCTCTCAAGTATCGGAATGGTGGAGTCTTAAGAAGATTTGGTCATACTGAGGCTTCG
GTTGATTTAGTAACATCAGCTGGCTTGCAACCAGTTTCTGTTCTTTCAACTATAGTTGAT
AAAAATGATGGTTCTATAGCCTCTATGCTCATTTTGAAAAATTTGGCCTTGGACCACAAG
ATTCCGATTGTATCAATAACTGATTTAGTAAGATATAGGAGAAAGAGGGAGAAGCTTGTC
GAAAGAACTGCAGTATCTCGTTTACCAACTAGATGGGGATTATTCGAGGCTTACTGTTAC
CGTTCAAAGCTTGATGGTACAGAGCATATAGCTGTCGTAAAGGGTGATATTGGAAATGGT
CAAGATGTGTTGGTAAGGGTACATTCAGAGTGTTTGACAGGGGATATTTTTGGATCACGA
CGATGTGATTGTGGTAATCAGCTGGATTTGGCAATGCAGCTGATTGAGGAAGCTGGTAGG
GGTTTGGTTATCTATCTCAGAGGCCACGAAGGACGAGGCATTGGCTTAGGCCACAAGCTT
CAGGCCTATAATTTGCAAGATGAGGGACATGATACTGTTGAAGCCAATCTAGAGCTCGGC
TTTGCTGCAGATGCTCGTGAGTATGGCATTGGCGCGCAGATGTTAAGGGATATAGGAGTT
CGTACCATGCGCCTAATGACTAACAATCCAGCAAAATTTACGGGTTTAAAGGGTTATGGT
TTAGCAGTCGTTGGACGGGTACCAGTTTTGACACCGTTCACAGATGAAAACAGGAAGTAT
TTGGAAACCAAAAGAACAAAGATGGGTCACATATATGGATCTGATGTACAAGGACCTATT
AAGGCGTCCATCAAACGGAATTTGGAGAAACAAGATCCATCCCAGGAAAGAAATGAAAGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400027235
PEP Infomation

pacid=37466207 transcript=PGSC0003DMT400040161 locus=PGSC0003DMG400015538 ID=PGSC0003DMT400040161.v4.03 annot-version=v4.03
Sequence

MDCVLFNQLLAPRIFISSNVHHQSFGNSHNNIVGIGHYRKRLSSPNLNTWTCRVAETPFE
NGSLFETLSAEITPQTIDFFVSETEGDPDCPTKGYSSIGEALNALSQGKFVIVVDDESGE
VEGNLVMAASFISAEAIAFMVRHGSGIISVGMKEEDLERLNLPLMSPEKENDSSAPSFTI
TVDAKKGTSTGVSASDRAKTVLALSSPTSTPEDFIRPGHVFPLKYRNGGVLRRFGHTEAS
VDLVTSAGLQPVSVLSTIVDKNDGSIASMLILKNLALDHKIPIVSITDLVRYRRKREKLV
ERTAVSRLPTRWGLFEAYCYRSKLDGTEHIAVVKGDIGNGQDVLVRVHSECLTGDIFGSR
RCDCGNQLDLAMQLIEEAGRGLVIYLRGHEGRGIGLGHKLQAYNLQDEGHDTVEANLELG
FAADAREYGIGAQMLRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVLTPFTDENRKY
LETKRTKMGHIYGSDVQGPIKASIKRNLEKQDPSQERNES*

Transcript Sequence

Transcript ID

PGSC0003DMT400040161
Transcript Infomation

pacid=37466207 locus=PGSC0003DMG400015538 ID=PGSC0003DMT400040161.v4.03 annot-version=v4.03
Sequence

ATGGATTGTGTGTTGTTTAATCAGCTATTAGCTCCAAGAATCTTTATTAGCTCAAATGTT
CATCATCAATCTTTTGGCAATTCACATAATAATATTGTTGGAATTGGACACTATAGAAAA
AGACTATCTTCTCCCAATTTGAATACTTGGACATGTAGGGTTGCTGAGACTCCATTTGAG
AATGGATCTTTATTTGAAACATTGAGTGCTGAAATAACCCCTCAAACTATTGATTTCTTT
GTGAGTGAAACAGAGGGTGATCCTGATTGTCCCACTAAAGGCTATTCTTCAATTGGAGAG
GCACTTAATGCATTGTCTCAAGGAAAGTTTGTCATTGTTGTAGATGATGAAAGTGGGGAA
GTGGAAGGAAACCTTGTCATGGCAGCATCATTTATTAGTGCTGAGGCAATTGCATTTATG
GTGAGACATGGTTCAGGCATTATTTCTGTGGGCATGAAGGAAGAGGATCTTGAGCGGCTC
AATCTTCCTTTGATGTCACCTGAAAAAGAAAATGACTCTTCTGCTCCATCCTTCACAATC
ACAGTGGATGCTAAGAAGGGCACATCTACTGGTGTATCGGCTTCAGATAGGGCTAAAACT
GTCCTGGCATTGTCCTCTCCTACTTCTACTCCTGAAGATTTCATAAGGCCAGGCCATGTT
TTTCCTCTCAAGTATCGGAATGGTGGAGTCTTAAGAAGATTTGGTCATACTGAGGCTTCG
GTTGATTTAGTAACATCAGCTGGCTTGCAACCAGTTTCTGTTCTTTCAACTATAGTTGAT
AAAAATGATGGTTCTATAGCCTCTATGCTCATTTTGAAAAATTTGGCCTTGGACCACAAG
ATTCCGATTGTATCAATAACTGATTTAGTAAGATATAGGAGAAAGAGGGAGAAGCTTGTC
GAAAGAACTGCAGTATCTCGTTTACCAACTAGATGGGGATTATTCGAGGCTTACTGTTAC
CGTTCAAAGCTTGATGGTACAGAGCATATAGCTGTCGTAAAGGGTGATATTGGAAATGGT
CAAGATGTGTTGGTAAGGGTACATTCAGAGTGTTTGACAGGGGATATTTTTGGATCACGA
CGATGTGATTGTGGTAATCAGCTGGATTTGGCAATGCAGCTGATTGAGGAAGCTGGTAGG
GGTTTGGTTATCTATCTCAGAGGCCACGAAGGACGAGGCATTGGCTTAGGCCACAAGCTT
CAGGCCTATAATTTGCAAGATGAGGGACATGATACTGTTGAAGCCAATCTAGAGCTCGGC
TTTGCTGCAGATGCTCGTGAGTATGGCATTGGCGCGCAGATGTTAAGGGATATAGGAGTT
CGTACCATGCGCCTAATGACTAACAATCCAGCAAAATTTACGGGTTTAAAGGGTTATGGT
TTAGCAGTCGTTGGACGGGTACCAGTTTTGACACCGTTCACAGATGAAAACAGGAAGTAT
TTGGAAACCAAAAGAACAAAGATGGGTCACATATATGGATCTGATGTACAAGGACCTATT
AAGGCGTCCATCAAACGGAATTTGGAGAAACAAGATCCATCCCAGGAAAGAAATGAAAGT
TGA