Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040125
CDS Infomation

pacid=37465941 polypeptide=PGSC0003DMP400027207 locus=PGSC0003DMG401015527 ID=PGSC0003DMT400040125.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTAGTCATTTTCTCCTACTTGTTTTACTTCTTTCTGTTTTCTCTGTTTATGCT
GATGTGTTTGTGAGCCTAGATTGTGGATCATCAGAAGCATACACTGATCATGAAACTTCA
ATAGATTGGTTAGGAGATGCTGACTACGTAGCCAATGGAGAATCTCATGTTGTACAATCC
AACAACTCATTATCACACGTAATGAACACTCTAAGAGTGTTCACAACCAGGACCAAGAAT
TGTTTCCTAATCGATGAAATCGAAAAGGGTGGAAAAGTTCTAATTCGAGCTAGTTTTTAC
TATGGAAATTACGATGGGAAATCAAATCCACCATCATTTGCACTTCAATTTGATGGAAAT
CATTGGGCCAGTGTTACAACTATGAGTGATCAACTTGTATATTATGAGACAGTTTATGTC
GTTAAAGGCGATTACCTTACTGTGTGTCTTGCTCAGACAGAGGACAATCAATTCCCTTTT
ATCTCAGCACTTGAAGTTCGTGGCTTGGATTCAACTATGTATAGTCATGTTGATGATAAT
CATGCTTTGTTCTTAAGAAGAAGAGTTGCTTTTGGTTCCAACAAAACTATCAGGAACACA
GATGATCCCTATGACAGAATATGGACTCCTGGTTCTGGAAATTTAATAGAAACACTCACT
AGTGATGCCACAACTATTGACACTAGCCATGGAGATCAACCCCCACAACAAGTGTTACAA
AATGCAATTTCCACAAACAATTCATTAAATATCATATCATGGAACATGAATTTTCTTCCT
ATTGATAGTGTTATCTACATGAACATGTACTTCTCTGAAGTAACTCAACTTGATGTCAAC
CAAACAAGATCATTTAGAATTTTTCAAGACAATGAGTCTATCTCTGACCCAATTTTGCCA
CCTTATGAGGATTTTATTCAAATGTATGTTAGCAATCTCACTGTTTCACCAGCCACTATT
TTTTCTGTTGTGAGAACCACAAATTCAACACTTCCTCCTCTTATCAATGCCTTGGAAATA
TTCACTATTGGTAATGCACTGACTGATGGAACAAACAGCCAAGATGTGGAGACTTTAATG
TCATTGCAAAAGGAATTTGAAGTATTACAAGGCTGGATTGGTGATCCTTGTCTTCCATCA
CCTTTTACATATGATTGGATCAATTGTAGCAGCAGTGATCCACCTCGCATTACAGCACTG
TACTTGAGCAAATTCAATCTATCAGGATCACTTCCAGATTTTAGTTCCATGGATGCTCTT
GAGACAATTGATTTGAGTAACAACGATTTGGATGGACCTATTCCTGATTTTTTTGGCACA
TTACCGAATCTAAAAGAACTGAATTTAGCAAATAACAAGTTCACTGGACCAGTCCCTGCT
TCATTGTCAAACAAAAATGGCCTAACCATAGATACTTCAGGCAATTTAGGTTTGTGCAGT
TCATCTGATGAATCTTGCCAAAATAATGATTCATCATCACCAGGAAATGATCAACCAGCA
ACTGGATCAACCAAGAAAAATAATAAGAAGAAGAAAAATAATATGCCAATAATACTGGGT
ACTACAATTCCAGCCTTCTTGCTTGTGTGGGCTATTGTGGGTATTTTTGCTATTTTACAC
TACAAAAACAAAAGGGCTACTACATCTCTTGTCAATCCAGGGCAAGCTAGTGGAGGCAGC
ACCCCTTTTGTAAATAGAGTCCAAATGTCTGAAAATTTTGAAAAGAATCCAGAGGTTGCT
GCCCATGATCATGAGAACTCAACAACTGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027207
PEP Infomation

pacid=37465941 transcript=PGSC0003DMT400040125 locus=PGSC0003DMG401015527 ID=PGSC0003DMT400040125.v4.03 annot-version=v4.03
Sequence

MASSHFLLLVLLLSVFSVYADVFVSLDCGSSEAYTDHETSIDWLGDADYVANGESHVVQS
NNSLSHVMNTLRVFTTRTKNCFLIDEIEKGGKVLIRASFYYGNYDGKSNPPSFALQFDGN
HWASVTTMSDQLVYYETVYVVKGDYLTVCLAQTEDNQFPFISALEVRGLDSTMYSHVDDN
HALFLRRRVAFGSNKTIRNTDDPYDRIWTPGSGNLIETLTSDATTIDTSHGDQPPQQVLQ
NAISTNNSLNIISWNMNFLPIDSVIYMNMYFSEVTQLDVNQTRSFRIFQDNESISDPILP
PYEDFIQMYVSNLTVSPATIFSVVRTTNSTLPPLINALEIFTIGNALTDGTNSQDVETLM
SLQKEFEVLQGWIGDPCLPSPFTYDWINCSSSDPPRITALYLSKFNLSGSLPDFSSMDAL
ETIDLSNNDLDGPIPDFFGTLPNLKELNLANNKFTGPVPASLSNKNGLTIDTSGNLGLCS
SSDESCQNNDSSSPGNDQPATGSTKKNNKKKKNNMPIILGTTIPAFLLVWAIVGIFAILH
YKNKRATTSLVNPGQASGGSTPFVNRVQMSENFEKNPEVAAHDHENSTTV*

Transcript Sequence

Transcript ID

PGSC0003DMT400040125
Transcript Infomation

pacid=37465941 locus=PGSC0003DMG401015527 ID=PGSC0003DMT400040125.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTAGTCATTTTCTCCTACTTGTTTTACTTCTTTCTGTTTTCTCTGTTTATGCT
GATGTGTTTGTGAGCCTAGATTGTGGATCATCAGAAGCATACACTGATCATGAAACTTCA
ATAGATTGGTTAGGAGATGCTGACTACGTAGCCAATGGAGAATCTCATGTTGTACAATCC
AACAACTCATTATCACACGTAATGAACACTCTAAGAGTGTTCACAACCAGGACCAAGAAT
TGTTTCCTAATCGATGAAATCGAAAAGGGTGGAAAAGTTCTAATTCGAGCTAGTTTTTAC
TATGGAAATTACGATGGGAAATCAAATCCACCATCATTTGCACTTCAATTTGATGGAAAT
CATTGGGCCAGTGTTACAACTATGAGTGATCAACTTGTATATTATGAGACAGTTTATGTC
GTTAAAGGCGATTACCTTACTGTGTGTCTTGCTCAGACAGAGGACAATCAATTCCCTTTT
ATCTCAGCACTTGAAGTTCGTGGCTTGGATTCAACTATGTATAGTCATGTTGATGATAAT
CATGCTTTGTTCTTAAGAAGAAGAGTTGCTTTTGGTTCCAACAAAACTATCAGGAACACA
GATGATCCCTATGACAGAATATGGACTCCTGGTTCTGGAAATTTAATAGAAACACTCACT
AGTGATGCCACAACTATTGACACTAGCCATGGAGATCAACCCCCACAACAAGTGTTACAA
AATGCAATTTCCACAAACAATTCATTAAATATCATATCATGGAACATGAATTTTCTTCCT
ATTGATAGTGTTATCTACATGAACATGTACTTCTCTGAAGTAACTCAACTTGATGTCAAC
CAAACAAGATCATTTAGAATTTTTCAAGACAATGAGTCTATCTCTGACCCAATTTTGCCA
CCTTATGAGGATTTTATTCAAATGTATGTTAGCAATCTCACTGTTTCACCAGCCACTATT
TTTTCTGTTGTGAGAACCACAAATTCAACACTTCCTCCTCTTATCAATGCCTTGGAAATA
TTCACTATTGGTAATGCACTGACTGATGGAACAAACAGCCAAGATGTGGAGACTTTAATG
TCATTGCAAAAGGAATTTGAAGTATTACAAGGCTGGATTGGTGATCCTTGTCTTCCATCA
CCTTTTACATATGATTGGATCAATTGTAGCAGCAGTGATCCACCTCGCATTACAGCACTG
TACTTGAGCAAATTCAATCTATCAGGATCACTTCCAGATTTTAGTTCCATGGATGCTCTT
GAGACAATTGATTTGAGTAACAACGATTTGGATGGACCTATTCCTGATTTTTTTGGCACA
TTACCGAATCTAAAAGAACTGAATTTAGCAAATAACAAGTTCACTGGACCAGTCCCTGCT
TCATTGTCAAACAAAAATGGCCTAACCATAGATACTTCAGGCAATTTAGGTTTGTGCAGT
TCATCTGATGAATCTTGCCAAAATAATGATTCATCATCACCAGGAAATGATCAACCAGCA
ACTGGATCAACCAAGAAAAATAATAAGAAGAAGAAAAATAATATGCCAATAATACTGGGT
ACTACAATTCCAGCCTTCTTGCTTGTGTGGGCTATTGTGGGTATTTTTGCTATTTTACAC
TACAAAAACAAAAGGGCTACTACATCTCTTGTCAATCCAGGGCAAGCTAGTGGAGGCAGC
ACCCCTTTTGTAAATAGAGTCCAAATGTCTGAAAATTTTGAAAAGAATCCAGAGGTTGCT
GCCCATGATCATGAGAACTCAACAACTGTTTAG