Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040115
CDS Infomation

pacid=37464576 polypeptide=PGSC0003DMP400027200 locus=PGSC0003DMG400015522 ID=PGSC0003DMT400040115.v4.03 annot-version=v4.03
Sequence

ATGGTGATCGAAAAGGGAAGCTTTAAGGCATCGCGATTTGATTCTGAGTTTTCTCCTCGT
AGTAGGGATAGTATGTCGAGTGAGGATGAGGAGTTTCAGAGACGAAACGGCGGAGGTGAG
GTTGAATCTAATGGCGAGGATGATGATGATGATTTTGATGATTGTGATTCAGGCGCGGGA
TCGGACGACTTTGATTTGTTGGAATTAGGGGAGTCTAAGGAAGAGTTTTGTCAAATTGGG
GATCAAACATGTAGCATTCCGTTCGAATTGTATGATCTTTCGGGATTGGGGGATGTGTTG
TCATTGGATGTTTGGAATGAGGTGTTGTCTGAGGAAGAAAGGTTTAATCTTACTCAGTAC
CTTCCTGACATGGACCAGGAAACGTTTATGCGAACATTGAAAGACCTCCTCACCGGTAAT
AATATGCATTTTGGAAGTCCCCTGGATAAGCTGTTTAACATGTTGAAGGGTGGGTTATGC
GAGCCAAGAGTGGCACTTTACCGTCAAGGATTGATTTTCTTTCAGAAGCGGAAGCATTAT
CACCAACTCAGAAACCATCAGAATGCAATTGTCAGTAATCTTTGTCAGATAAGAGATGCT
TGGCTCAGTTGCCCTGGGTATAGCATTGAGGAGAAGCTTCAAGTGCTGAACATTAAGAAG
AATGAGAAGATTTTAATGTACGAGAAAATGGAAGAATTGGAAAGTGATGGATCCGAGAGA
GAGGAGTTCAGTGATACTTTGTGGGGCAAAAGAACAAAAGATCGTAATCTTGGTCAGAAT
ATGGGCTGTTATTCTGGATATGGAATAGGGTCAGCCTTGGATTCATCATCTAGACAAATG
GCTTCGGAAGCTACCAGATACAAAAAGCAGAACCTAAAAGGGACTTTGAAGGTAGGTGGA
ACAAAGGGTTCTGCATTGCCTCCTTTTCGTCGTGGTAAAGGAATGGACTATGATTCTGGG
ATGGCTGTCCCAATGAGGGATATGTTGAATGGCAATTATGAGGAGGATGGGATGTATGAA
GTGGATGTGCAGAGAGAGAGAAACTTTTCACGGGCAGGGGCTGTTGATAGAAGTGGGACT
GTAAAATTGGGGAAAAAGCATGAAAGGTTGAGAGTGGAAGAATGCTCTGATGTTTTCATG
GGTGTGCCTGTCCCGTTGAAGAATGATCTTTATGCCTATGGAAGAAACAATACTGTCAAT
CAGCTGTCAGATATTAAGGTCTTGACTGCAAAGCCAAGTAATGCCAGAGCTGCATATGAA
TTTGGGAAAAAAGACAGGTATGCTGATGGTCTCCCACAGTTTTTCTCTGAAGATCAGATG
AATTATGGGAAAATCCGGATTCCTAAAATGTCGGTGAAGGGAAGTGGAATGGAACTAGCG
AGCGGAAGTGAACCGTTTTGGCCAAGTAAAGCACAAGAGGATAATTATTTTGCCAACCCA
TCACACAAGCTTGGTAACGTGAGCAAAAAGTGGAAGGTGGACCAAGAATATCCTGATCGG
AAGTTAAATGATAAGTTATTTCAGTCAGACTATAGGGCAAAAGCCTTCCCTGAGAAAGTC
AAGGCGAAAATGCAGAATGGAGGACAAGATGGGTCAGGAACTAGAGGTAGAAGAGTATTT
GCAAAGACTGAAGAAACTGAATCTGAATCATCAGAAAGAAGTGACGAGGGTAACAATCCA
TTGATGAGGAGCAAGTGGGCATATCCCAGTGGTTCCACGAACTTGACGTCTGCATTGGAT
ACTAAAAGGGCTAAATTTGGTCAAAAGGATAAGTACAGTATACCGGTTCGTGATGGTTCA
TTACATTCTTCTAGGATGATGAACGACTCCAGTGAACTTTTCCGCCCAAAGAGAAGTGGA
AGTCGTGGCTTGGGAGCAGAACCAATGGGTAAGATGCATGATCTTGGTCATATGAGTAGT
TTCTCCACTAGAAATCATTTCTCTGGCTTAAGTCAGTTCGACAATGACAATGATGATGAA
GATGAGCAACCAATCTACAAGCTGGCCAAGAATGGTCCTTTGCAAGGGGACCATACTGAA
AAGTACCACATGGCATCCACCAGAGAGAAGAAACAAAAAGGAAAAGTTAGCCGTGATATC
CTGCCTGCAAATTATATACAAGATCACAAGTTTCAAGAGGATGACTCATTGCGGACACGG
TTGCCGGCCAAAAGGAATGGAGTTTCTACCAAGTTTTCAAAGAAAGGTCAGATGCTTGAC
ACAAGTGCTCTTGATCACCATGAAAAATCTGATATGCATTTAACAGGTTGCAACTCAGTC
ATGAAGAAGCGGAAAGTCAAAGTTGATGTCCCATACATGGATGAGCTAGATGATACTGAC
CCTCTCTATTCTGATACCCAGCAGCGACAAGATGACCTCTCAGTGAAGCGGGGTAAAAAG
AAGCTGGAGGATGAAACATGGCCTCCTTTAGTGGGAGTTCCCAGATCCCCAACTTCAGAA
ATGATAGTAGAAGATGTAGATGTAGAAAGCCGACCTCAAAAAAAGCCATTCACTTTGATT
ACTCCTACAGTTCATACTGGCTTTTCATTCTCCATCATTCATCTTCTTTCAGCAGCTCGT
ATGGCAATGATTACTTTGCTTCCAGAAGAGGCTGTAGATACAATTGCTGGAAGACAGGAA
GCTCTGGAGGAGCATGGTGGAGTTGCACCACCCTCAGAGTTGGATGGTGATAATTCAATT
CCTTCCACTCAAGCAAAGGTGCCCTCTCTGAGTGTTCAAGAAATTGTTAACCGTGTGAGA
TCAAACCCGGGAGATCCCTGTATTCTTGAGACTCAAGAACCTCTCCATGATTTGGTCAGA
GGAGTGCTCAAAATATTTTCTTCCAAAACAGCACCGCTTGGTGCAAAAGGGTGGAAGTCT
CTTGTGGTCTATGACAAACCCACCAAAAGTTGGTCATGGATTGGTCCAGTGAGCCCTGAT
TCATCTGATCATGAGCCTATGGAGGAAGTCACATCTCCAGAAGTGTGGGGTCTTCCTCAC
AAAATGCTTGTCAAGTTGGTTGATTCTTTTGCCAATTGGCTGAAAAATGGTCAGGAGACG
CTACGGCAGATAGGAAGTCTCCCTGACCCTCCGTTGTCGTTGATGCAATATAATCTAGAT
GAGAAGGAAAGGTTCAGAGATTTGCGAGCTCAGAAGAGTCTGAGTACCATTGGCCCAAGC
TCCGAAGAAGTTAGAGAGTATTTCCGTAAAGAGGAATTCCTTAGGTATTCAATACCTGAC
AGGGCCTTCTCCTACACTGCTATTGATGGGAAAAAATCAATAGTTGCTCCTCTGAGAAGG
TGTGGTGGCAAGCCAACGTCAAAAGCTCGTGATCACTTCATGCTTAAAAAGGATCGCCCT
GCCCATGTAACGATTCTCTGTCTTGTGCGAGATGCAGCTGCTAGGTTGCCTGGCAGCACA
GGAACTAGAGCAGATGTTTGTACTTTAATCAGAGACTCACAGTATATTGTGGAAGAGGTT
TCTGATGCTCAAGTCAATCAAGTTGTTAGTGGTGCGTTGGATCGTTTGCATTATGAACGT
GATCCTTGTGTACAGTTTGATAATGAGAAGAAGCTCTGGGTTTACTTGCACAGAGATAGA
GAAGAAGAAGATTTTGAGGATGATGGTACTTCATCTACAAAGAAATGGAAGAGGCAAAAG
AAAGAAGTTGCTGAACCATCTGATCAAGGAGCAGTAACCGTAGCTTATAATGGGACAGGG
GAACAAAATGGTTTTGATTTGAGCTCAGATCCCAATGTTGAGCCCTCAAATGTGGATGAG
GATCGAACAGACCTTACTTATGAGGATGGTAAGGATCATGTAGAGGGGAATATTAAAAGC
AGCCATATGTCAGAACAAGGTGCTATGCATTGTGGTTCTTCTCTGATGGATTGGGATACT
CTTTGCTCAACTCCTGGAGATGGAAATAAGTTGTTATGTCAGCAAAACTCTACTGATAAT
TTTGTTGATGAAACATGTGGTGGAGAACCACCAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027200
PEP Infomation

pacid=37464576 transcript=PGSC0003DMT400040115 locus=PGSC0003DMG400015522 ID=PGSC0003DMT400040115.v4.03 annot-version=v4.03
Sequence

MVIEKGSFKASRFDSEFSPRSRDSMSSEDEEFQRRNGGGEVESNGEDDDDDFDDCDSGAG
SDDFDLLELGESKEEFCQIGDQTCSIPFELYDLSGLGDVLSLDVWNEVLSEEERFNLTQY
LPDMDQETFMRTLKDLLTGNNMHFGSPLDKLFNMLKGGLCEPRVALYRQGLIFFQKRKHY
HQLRNHQNAIVSNLCQIRDAWLSCPGYSIEEKLQVLNIKKNEKILMYEKMEELESDGSER
EEFSDTLWGKRTKDRNLGQNMGCYSGYGIGSALDSSSRQMASEATRYKKQNLKGTLKVGG
TKGSALPPFRRGKGMDYDSGMAVPMRDMLNGNYEEDGMYEVDVQRERNFSRAGAVDRSGT
VKLGKKHERLRVEECSDVFMGVPVPLKNDLYAYGRNNTVNQLSDIKVLTAKPSNARAAYE
FGKKDRYADGLPQFFSEDQMNYGKIRIPKMSVKGSGMELASGSEPFWPSKAQEDNYFANP
SHKLGNVSKKWKVDQEYPDRKLNDKLFQSDYRAKAFPEKVKAKMQNGGQDGSGTRGRRVF
AKTEETESESSERSDEGNNPLMRSKWAYPSGSTNLTSALDTKRAKFGQKDKYSIPVRDGS
LHSSRMMNDSSELFRPKRSGSRGLGAEPMGKMHDLGHMSSFSTRNHFSGLSQFDNDNDDE
DEQPIYKLAKNGPLQGDHTEKYHMASTREKKQKGKVSRDILPANYIQDHKFQEDDSLRTR
LPAKRNGVSTKFSKKGQMLDTSALDHHEKSDMHLTGCNSVMKKRKVKVDVPYMDELDDTD
PLYSDTQQRQDDLSVKRGKKKLEDETWPPLVGVPRSPTSEMIVEDVDVESRPQKKPFTLI
TPTVHTGFSFSIIHLLSAARMAMITLLPEEAVDTIAGRQEALEEHGGVAPPSELDGDNSI
PSTQAKVPSLSVQEIVNRVRSNPGDPCILETQEPLHDLVRGVLKIFSSKTAPLGAKGWKS
LVVYDKPTKSWSWIGPVSPDSSDHEPMEEVTSPEVWGLPHKMLVKLVDSFANWLKNGQET
LRQIGSLPDPPLSLMQYNLDEKERFRDLRAQKSLSTIGPSSEEVREYFRKEEFLRYSIPD
RAFSYTAIDGKKSIVAPLRRCGGKPTSKARDHFMLKKDRPAHVTILCLVRDAAARLPGST
GTRADVCTLIRDSQYIVEEVSDAQVNQVVSGALDRLHYERDPCVQFDNEKKLWVYLHRDR
EEEDFEDDGTSSTKKWKRQKKEVAEPSDQGAVTVAYNGTGEQNGFDLSSDPNVEPSNVDE
DRTDLTYEDGKDHVEGNIKSSHMSEQGAMHCGSSLMDWDTLCSTPGDGNKLLCQQNSTDN
FVDETCGGEPPA*

Transcript Sequence

Transcript ID

PGSC0003DMT400040115
Transcript Infomation

pacid=37464576 locus=PGSC0003DMG400015522 ID=PGSC0003DMT400040115.v4.03 annot-version=v4.03
Sequence

ATGGTGATCGAAAAGGGAAGCTTTAAGGCATCGCGATTTGATTCTGAGTTTTCTCCTCGT
AGTAGGGATAGTATGTCGAGTGAGGATGAGGAGTTTCAGAGACGAAACGGCGGAGGTGAG
GTTGAATCTAATGGCGAGGATGATGATGATGATTTTGATGATTGTGATTCAGGCGCGGGA
TCGGACGACTTTGATTTGTTGGAATTAGGGGAGTCTAAGGAAGAGTTTTGTCAAATTGGG
GATCAAACATGTAGCATTCCGTTCGAATTGTATGATCTTTCGGGATTGGGGGATGTGTTG
TCATTGGATGTTTGGAATGAGGTGTTGTCTGAGGAAGAAAGGTTTAATCTTACTCAGTAC
CTTCCTGACATGGACCAGGAAACGTTTATGCGAACATTGAAAGACCTCCTCACCGGTAAT
AATATGCATTTTGGAAGTCCCCTGGATAAGCTGTTTAACATGTTGAAGGGTGGGTTATGC
GAGCCAAGAGTGGCACTTTACCGTCAAGGATTGATTTTCTTTCAGAAGCGGAAGCATTAT
CACCAACTCAGAAACCATCAGAATGCAATTGTCAGTAATCTTTGTCAGATAAGAGATGCT
TGGCTCAGTTGCCCTGGGTATAGCATTGAGGAGAAGCTTCAAGTGCTGAACATTAAGAAG
AATGAGAAGATTTTAATGTACGAGAAAATGGAAGAATTGGAAAGTGATGGATCCGAGAGA
GAGGAGTTCAGTGATACTTTGTGGGGCAAAAGAACAAAAGATCGTAATCTTGGTCAGAAT
ATGGGCTGTTATTCTGGATATGGAATAGGGTCAGCCTTGGATTCATCATCTAGACAAATG
GCTTCGGAAGCTACCAGATACAAAAAGCAGAACCTAAAAGGGACTTTGAAGGTAGGTGGA
ACAAAGGGTTCTGCATTGCCTCCTTTTCGTCGTGGTAAAGGAATGGACTATGATTCTGGG
ATGGCTGTCCCAATGAGGGATATGTTGAATGGCAATTATGAGGAGGATGGGATGTATGAA
GTGGATGTGCAGAGAGAGAGAAACTTTTCACGGGCAGGGGCTGTTGATAGAAGTGGGACT
GTAAAATTGGGGAAAAAGCATGAAAGGTTGAGAGTGGAAGAATGCTCTGATGTTTTCATG
GGTGTGCCTGTCCCGTTGAAGAATGATCTTTATGCCTATGGAAGAAACAATACTGTCAAT
CAGCTGTCAGATATTAAGGTCTTGACTGCAAAGCCAAGTAATGCCAGAGCTGCATATGAA
TTTGGGAAAAAAGACAGGTATGCTGATGGTCTCCCACAGTTTTTCTCTGAAGATCAGATG
AATTATGGGAAAATCCGGATTCCTAAAATGTCGGTGAAGGGAAGTGGAATGGAACTAGCG
AGCGGAAGTGAACCGTTTTGGCCAAGTAAAGCACAAGAGGATAATTATTTTGCCAACCCA
TCACACAAGCTTGGTAACGTGAGCAAAAAGTGGAAGGTGGACCAAGAATATCCTGATCGG
AAGTTAAATGATAAGTTATTTCAGTCAGACTATAGGGCAAAAGCCTTCCCTGAGAAAGTC
AAGGCGAAAATGCAGAATGGAGGACAAGATGGGTCAGGAACTAGAGGTAGAAGAGTATTT
GCAAAGACTGAAGAAACTGAATCTGAATCATCAGAAAGAAGTGACGAGGGTAACAATCCA
TTGATGAGGAGCAAGTGGGCATATCCCAGTGGTTCCACGAACTTGACGTCTGCATTGGAT
ACTAAAAGGGCTAAATTTGGTCAAAAGGATAAGTACAGTATACCGGTTCGTGATGGTTCA
TTACATTCTTCTAGGATGATGAACGACTCCAGTGAACTTTTCCGCCCAAAGAGAAGTGGA
AGTCGTGGCTTGGGAGCAGAACCAATGGGTAAGATGCATGATCTTGGTCATATGAGTAGT
TTCTCCACTAGAAATCATTTCTCTGGCTTAAGTCAGTTCGACAATGACAATGATGATGAA
GATGAGCAACCAATCTACAAGCTGGCCAAGAATGGTCCTTTGCAAGGGGACCATACTGAA
AAGTACCACATGGCATCCACCAGAGAGAAGAAACAAAAAGGAAAAGTTAGCCGTGATATC
CTGCCTGCAAATTATATACAAGATCACAAGTTTCAAGAGGATGACTCATTGCGGACACGG
TTGCCGGCCAAAAGGAATGGAGTTTCTACCAAGTTTTCAAAGAAAGGTCAGATGCTTGAC
ACAAGTGCTCTTGATCACCATGAAAAATCTGATATGCATTTAACAGGTTGCAACTCAGTC
ATGAAGAAGCGGAAAGTCAAAGTTGATGTCCCATACATGGATGAGCTAGATGATACTGAC
CCTCTCTATTCTGATACCCAGCAGCGACAAGATGACCTCTCAGTGAAGCGGGGTAAAAAG
AAGCTGGAGGATGAAACATGGCCTCCTTTAGTGGGAGTTCCCAGATCCCCAACTTCAGAA
ATGATAGTAGAAGATGTAGATGTAGAAAGCCGACCTCAAAAAAAGCCATTCACTTTGATT
ACTCCTACAGTTCATACTGGCTTTTCATTCTCCATCATTCATCTTCTTTCAGCAGCTCGT
ATGGCAATGATTACTTTGCTTCCAGAAGAGGCTGTAGATACAATTGCTGGAAGACAGGAA
GCTCTGGAGGAGCATGGTGGAGTTGCACCACCCTCAGAGTTGGATGGTGATAATTCAATT
CCTTCCACTCAAGCAAAGGTGCCCTCTCTGAGTGTTCAAGAAATTGTTAACCGTGTGAGA
TCAAACCCGGGAGATCCCTGTATTCTTGAGACTCAAGAACCTCTCCATGATTTGGTCAGA
GGAGTGCTCAAAATATTTTCTTCCAAAACAGCACCGCTTGGTGCAAAAGGGTGGAAGTCT
CTTGTGGTCTATGACAAACCCACCAAAAGTTGGTCATGGATTGGTCCAGTGAGCCCTGAT
TCATCTGATCATGAGCCTATGGAGGAAGTCACATCTCCAGAAGTGTGGGGTCTTCCTCAC
AAAATGCTTGTCAAGTTGGTTGATTCTTTTGCCAATTGGCTGAAAAATGGTCAGGAGACG
CTACGGCAGATAGGAAGTCTCCCTGACCCTCCGTTGTCGTTGATGCAATATAATCTAGAT
GAGAAGGAAAGGTTCAGAGATTTGCGAGCTCAGAAGAGTCTGAGTACCATTGGCCCAAGC
TCCGAAGAAGTTAGAGAGTATTTCCGTAAAGAGGAATTCCTTAGGTATTCAATACCTGAC
AGGGCCTTCTCCTACACTGCTATTGATGGGAAAAAATCAATAGTTGCTCCTCTGAGAAGG
TGTGGTGGCAAGCCAACGTCAAAAGCTCGTGATCACTTCATGCTTAAAAAGGATCGCCCT
GCCCATGTAACGATTCTCTGTCTTGTGCGAGATGCAGCTGCTAGGTTGCCTGGCAGCACA
GGAACTAGAGCAGATGTTTGTACTTTAATCAGAGACTCACAGTATATTGTGGAAGAGGTT
TCTGATGCTCAAGTCAATCAAGTTGTTAGTGGTGCGTTGGATCGTTTGCATTATGAACGT
GATCCTTGTGTACAGTTTGATAATGAGAAGAAGCTCTGGGTTTACTTGCACAGAGATAGA
GAAGAAGAAGATTTTGAGGATGATGGTACTTCATCTACAAAGAAATGGAAGAGGCAAAAG
AAAGAAGTTGCTGAACCATCTGATCAAGGAGCAGTAACCGTAGCTTATAATGGGACAGGG
GAACAAAATGGTTTTGATTTGAGCTCAGATCCCAATGTTGAGCCCTCAAATGTGGATGAG
GATCGAACAGACCTTACTTATGAGGATGGTAAGGATCATGTAGAGGGGAATATTAAAAGC
AGCCATATGTCAGAACAAGGTGCTATGCATTGTGGTTCTTCTCTGATGGATTGGGATACT
CTTTGCTCAACTCCTGGAGATGGAAATAAGTTGTTATGTCAGCAAAACTCTACTGATAAT
TTTGTTGATGAAACATGTGGTGGAGAACCACCAGCTTGA